Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 629,579 | T→C | S94P (TCT→CCT) | entH → | proofreading thioesterase in enterobactin biosynthesis |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 629,579 | 0 | T | C | 97.7% | 289.3 / NA | 87 | S94P (TCT→CCT) | entH | proofreading thioesterase in enterobactin biosynthesis |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (56/29); minor base G (2/0); total (58/29) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.50e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GCCGTTCGGTTTACTACATGGCGGCGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGTCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGTTTTGGGATGAA > NC_000913/629443‑629714 | gCCGTTCGGTTTACTACATGGCGGCGCGTCGGCGGCGCTGGCGGAAACACTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTg < 2:647232/140‑1 (MQ=255) cGTTCGGTTTACTACATGGCGGCGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAg < 2:821289/140‑1 (MQ=255) ttCGGTTTACTACATGGCGGCGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAggg < 2:1092273/140‑1 (MQ=255) ttCGGTTTACTACATGGCGGCGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAggg > 1:1092273/1‑140 (MQ=255) ttCGGTTTACTACATGGCGGCGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAggg > 1:1328558/1‑140 (MQ=255) tCGGTTTACTACATGGCGGCGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGa < 1:57530/140‑1 (MQ=255) ggcggcGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACATACCATCGACCGATGCCTGAGGGAAAGGTACGCGGCGt > 1:542441/1‑140 (MQ=255) ggcggcGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGTCCGGTGGCTGAGGGAAAGGTACGCGGCGt > 1:598416/1‑140 (MQ=255) ggcggcGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGt > 1:42980/1‑140 (MQ=255) ggcggcGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGt > 1:1113289/1‑140 (MQ=255) cggcgCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCt > 2:1432039/1‑140 (MQ=255) cggcgCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCt > 1:1387693/1‑140 (MQ=255) cgcgTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATTCAACACACCATCGCACTGTGCCTGAGGGAATCGTACGCGGCGTCTGcc > 2:728828/1‑140 (MQ=255) cgcgTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTAcg > 2:356630/1‑129 (MQ=255) cgcgTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTAcg < 1:356630/129‑1 (MQ=255) cgcgTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGcc > 2:271155/1‑140 (MQ=255) cgcgTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATACAACACACGATCGCCCAGTGCCTGAGGGAAAGGTACGCGGCGTCTGcc > 2:422617/1‑140 (MQ=255) cggcggCGCTGGCGGAAACGCTGGGGTCGATGGCCGGTTTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCg < 1:586256/140‑1 (MQ=255) cggcggCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCg < 1:140505/140‑1 (MQ=255) gcggcgCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCt < 2:1387693/140‑1 (MQ=255) gcTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATAGCCCGGTGGCTGGGGGTAAGGTACGCGGCGACTGCCAGCCGCTGCATc > 2:586256/1‑140 (MQ=255) aaCGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGc > 2:1203247/1‑140 (MQ=255) aaCGCTGGGATCGATAGCCGGACTTCTGACGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGc < 1:728828/140‑1 (MQ=255) ggATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCa < 1:271155/140‑1 (MQ=255) gATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCag > 1:252299/1‑140 (MQ=255) aTCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCaga > 2:340343/1‑140 (MQ=255) tCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCagag < 2:360574/140‑1 (MQ=255) aTGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCa > 2:872206/1‑134 (MQ=255) aTGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCa < 1:872206/134‑1 (MQ=255) aTGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTg > 2:913767/1‑140 (MQ=255) aTGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTg > 1:215254/1‑140 (MQ=255) aTGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGCACGCGGCGTCTGACAGACGCTGCATTTTGGTCGGCAAAATCAGAGCTg > 2:706862/1‑140 (MQ=255) ccGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGaa > 1:162474/1‑140 (MQ=255) ccGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGaa > 1:1053904/1‑140 (MQ=255) tttATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATTCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAAtcgt < 2:633574/140‑1 (MQ=255) atgatgACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATcgtcgt < 2:1427907/140‑1 (MQ=255) gaCCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCg < 1:1432039/140‑1 (MQ=255) aCCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGa > 1:854590/1‑140 (MQ=255) aCCCGCGACGGACAGTGTGTGGAAGGCACAGAACTAAATCCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGa < 2:598416/140‑1 (MQ=255) gcgACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAGAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGaa < 2:1050429/140‑1 (MQ=255) tgtgtgGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCTGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGgcggcg > 2:719420/1‑140 (MQ=255) tgtgtgGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGgcggcg < 2:252299/140‑1 (MQ=255) gTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTtgctg < 1:1203247/140‑1 (MQ=255) ggCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCAc > 1:1484817/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGCTGTACAGGGACGGCGTTGCTGCACt > 1:715815/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGggcg < 1:762202/127‑1 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGggcg > 2:762202/1‑127 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCa > 1:880377/1‑138 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCa < 2:880377/138‑1 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACt > 2:1467002/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACt > 2:903857/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACt > 2:1408150/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACt > 1:915513/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACt > 2:1037438/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACt > 1:198852/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACt > 1:841324/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACt > 1:64657/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAAACGTCGTTGTCGATGCACAGGGGCGGCGTTGCTGCACt > 1:445431/1‑140 (MQ=255) gCACAGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCATCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACt > 1:202044/1‑140 (MQ=255) acaGAACTTAATGCAACACACCATCGCCCGGAGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAACT‑GGAAATTGTAGTTTACGATGAAATGGGGAGGCGTTGCTGCACTTGt > 2:588068/1‑140 (MQ=255) aGAACTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTc > 1:1273339/1‑140 (MQ=255) aaCTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCgg < 2:1375596/140‑1 (MQ=255) aaCTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCgg > 1:376162/1‑140 (MQ=255) aaCTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCCGCATCTCGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTATcag > 2:1387106/1‑138 (MQ=255) aaCTTAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGAACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCgg > 2:1279188/1‑140 (MQ=255) tAATGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTgg > 1:1025342/1‑140 (MQ=255) aaTGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTggg > 1:950093/1‑140 (MQ=255) aaTGCAACACACCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCAATGAACACGGGAGGAGTTGCTGCACTTGTCGGCTggg > 1:435496/1‑140 (MQ=255) acacacCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGc < 2:1328558/140‑1 (MQ=255) acacacCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGc > 1:239079/1‑140 (MQ=255) cacacCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCa > 1:1095362/1‑140 (MQ=255) cacacCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCa > 2:235890/1‑140 (MQ=255) cacacCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGAGACCGCGTTGCTTCACTGGTCGGCTGGGTACGGCa > 2:672008/1‑140 (MQ=255) acCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGtt > 1:1415877/1‑140 (MQ=255) acCATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGtt > 2:624499/1‑140 (MQ=255) ccATCGCCCGGTGCCGGAGGGAAAGTTACGCGGCGTCGGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGttt < 1:672008/140‑1 (MQ=255) cATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGTTGAACAGGGGCGGCGTGGCTGCACTCGTCGACTGGGTACGGCAGtttt > 2:681169/1‑140 (MQ=255) cATCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGtttt > 1:1255382/1‑140 (MQ=255) tCGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTACACGTGACGGCTGAGTTCGGCAGTTTTgg > 1:713018/1‑140 (MQ=255) cGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGTTTTggg < 2:239079/140‑1 (MQ=255) cGCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGTTTTggg < 2:1415877/140‑1 (MQ=255) gCCCGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATAGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGTTTTGGGa > 1:1022165/1‑140 (MQ=255) cccGGTGCTTGAGGGAGAGGTATGCGGCGTGTGTCGGCCTCTGCATCTGGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGTTTTGGGAt < 2:715815/140‑1 (MQ=255) cccGGTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGTTTTGGGAt > 1:147465/1‑140 (MQ=255) ggTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGttt > 1:382527/1‑131 (MQ=255) ggTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGttt < 2:382527/131‑1 (MQ=255) ggTGCCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGTTTTGGGATGaa < 2:841324/140‑1 (MQ=255) | GCCGTTCGGTTTACTACATGGCGGCGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGTCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGTTTTGGGATGAA > NC_000913/629443‑629714 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |