BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	954,097	C→T	G124S (GGC→AGC)	focA ←	formate channel FocA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	954,097	0	C	T	100.0%	364.7 / NA	104	G124S (GGC→AGC)	focA	formate channel FocA
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (53/51); total (53/51)

Only 100 of 105 total aligned reads displayed.

ATACCAAGACAGACGGCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCCGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAG  >  NC_000913/953961‑954232

aTACCAAGACAGACGGCTTCAATAAAAGTATGGTGCACTTTGTGGTCGACGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGAc                                                                                                                                      <  2:657261/140‑1 (MQ=255)

aTACCAAGACAGACGGCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGAc                                                                                                                                      >  1:777678/1‑140 (MQ=255)

aTACCAAGACAGACGGCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGAc                                                                                                                                      >  2:382203/1‑140 (MQ=255)

aTACCAAGACAGACGGCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGAc                                                                                                                                      >  1:194163/1‑140 (MQ=255)

   ccAAGACAGACGGCCCCAATAATAGCATGTTGCACTTCGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAg                                                                                                                                   <  1:435897/140‑1 (MQ=255)

         cagacGGCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGcc                                                                                                                             <  1:1067680/140‑1 (MQ=255)

         cagacGGCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGcc                                                                                                                             >  2:1287313/1‑140 (MQ=255)

           gacGGCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCaa                                                                                                                           >  2:830754/1‑140 (MQ=255)

           gacGGCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCaa                                                                                                                           >  2:64155/1‑140 (MQ=255)

            acGGCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCaaa                                                                                                                          >  1:306142/1‑140 (MQ=255)

            acGACCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGATTGTAGGACGTTTAGTCCCCATTGACCCTTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCaaa                                                                                                                          >  2:1193104/1‑140 (MQ=255)

              ggCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAAt                                                                                                                        <  2:777678/140‑1 (MQ=255)

                 cTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGa                                                                                                                     >  1:1495069/1‑140 (MQ=255)

                   cAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACa                                                                                                                   >  1:871218/1‑140 (MQ=255)

                          aGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGcc                                                                                                                             >  2:44815/1‑123 (MQ=255)

                          aGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGcc                                                                                                                             <  1:44815/123‑1 (MQ=255)

                          aGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGcc                                                                                                            >  1:152961/1‑140 (MQ=255)

                              tGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACTAGGATGTCAAAATAGACATTTAGCCAGtt                                                                                                        >  1:423315/1‑140 (MQ=255)

                              tGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGATGACAAAATAGACATTTAGCCAGtt                                                                                                        >  1:637789/1‑140 (MQ=255)

                                   cACTTTGTGGTCGGCCGTTTGTCGGTCGTCTAGTCCCTATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCg                                                                                                   <  1:393502/140‑1 (MQ=255)

                                       ttGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCaa                                                                                               <  1:1540034/140‑1 (MQ=255)

                                       ttGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCaa                                                                                               <  1:382203/140‑1 (MQ=255)

                                        tgtgGTCGGCGGTTTGTCGGACCTTTAGTCCCCATCGACTATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAAc                                                                                              <  2:423315/140‑1 (MQ=255)

                                        tgtgGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACGAGGCTGCGAAAATAGACATTTAGCCAGTTTTTCGCCAAc                                                                                              >  2:514442/1‑140 (MQ=255)

                                        tgtgGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAAc                                                                                              >  2:1277275/1‑140 (MQ=255)

                                        tgtgGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAAc                                                                                              <  1:1287313/140‑1 (MQ=255)

                                        tgtgGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAAc                                                                                              <  1:770249/140‑1 (MQ=255)

                                         gtgGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACt                                                                                             <  2:271378/140‑1 (MQ=255)

                                         gtgGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACt                                                                                             <  2:319190/140‑1 (MQ=255)

                                          tgGTCGGCGGTTTGTGGGACGTTTAGTCCGCATTGACTATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTg                                                                                            <  1:744006/140‑1 (MQ=255)

                                           ggTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGc                                                                                                             <  1:41751/122‑1 (MQ=255)

                                           ggTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGc                                                                                                             >  2:41751/1‑122 (MQ=255)

                                           ggTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGa                                                                                           >  2:101813/1‑140 (MQ=255)

                                            gTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGAc                                                                                          <  2:306142/140‑1 (MQ=255)

                                               ggcggTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGAcccc                                                                                       >  1:1322609/1‑140 (MQ=255)

                                                gcggTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTg                                                                                            >  2:935595/1‑134 (MQ=255)

                                                gcggTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTg                                                                                            <  1:935595/134‑1 (MQ=255)

                                                gcggTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCa                                                                                      >  2:766560/1‑140 (MQ=255)

                                                    tttGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGTTTGCCAAAATAGTCATTGAGCCAGTCTTTCGGCAACTGACCCCAGGTg                                                                                  >  2:744006/1‑140 (MQ=255)

                                                        agacaggTTTAGTCCACATTGATCATTTGCGGTCATACACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATgc                                                                              <  1:450935/134‑1 (MQ=255)

                                                             cGTTTAGTCCCCATTAACCATTTGCAGTCTTATACTCACCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCa                                                                         <  1:454683/140‑1 (MQ=255)

                                                                         aTTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGGCAGTTTTTCGCCAACTGACCCCAGGAGATGAGCCCACTCGccctgtct                                                             >  2:450935/1‑134 (MQ=255)

                                                                         aTTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACt                                                                       >  2:964131/1‑130 (MQ=255)

                                                                         aTTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACt                                                                       <  1:964131/130‑1 (MQ=255)

                                                                         aTTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGca                                                             >  1:361808/1‑140 (MQ=255)

                                                                         aTTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGca                                                             >  1:184686/1‑140 (MQ=255)

                                                                         aTTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTAGCCCACTGACCCCAGGCGATGGTCCCACTCCCCTTAGca                                                             >  2:742542/1‑140 (MQ=255)

                                                                          ttGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGcaa                                                            <  2:1322609/140‑1 (MQ=255)

                                                                            gACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGcaaca                                                          <  2:1373412/140‑1 (MQ=255)

                                                                            gACCATTTGCGGTCATACACTCGCCGGAAAGCCACATTAAAAGTACAACCAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGcaaca                                                          <  2:641120/140‑1 (MQ=255)

                                                                            gACCATTTGCGGTCAAATACTCCCCGGAACGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGcaaca                                                          <  1:514442/140‑1 (MQ=255)

                                                                             aCCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGc                                                                    <  2:965636/129‑1 (MQ=255)

                                                                             aCCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGc                                                                    >  1:965636/1‑129 (MQ=255)

                                                                             aCCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGcaacaa                                                         >  2:337950/1‑140 (MQ=255)

                                                                             aCCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGcaacaa                                                         >  2:513239/1‑140 (MQ=255)

                                                                              ccATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGcaaca                                                          >  2:308043/1‑138 (MQ=255)

                                                                              ccATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGcaaca                                                          <  1:308043/138‑1 (MQ=255)

                                                                               cATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGcaacaaca                                                       >  2:20143/1‑140 (MQ=255)

                                                                                  ttGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACTCCAGGTGGTGCGCCTACTCGCATTAGCAACAACAATc                                                    >  1:403844/1‑140 (MQ=255)

                                                                                  ttGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATc                                                    <  1:835810/140‑1 (MQ=255)

                                                                                  ttGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATc                                                    >  1:82518/1‑140 (MQ=255)

                                                                                  ttGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATc                                                    >  1:328601/1‑140 (MQ=255)

                                                                                  ttGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATc                                                    >  1:1241611/1‑140 (MQ=255)

                                                                                  ttGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCACTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACACCAGGTGGTGCACCGACTCGCATTAGCAACAACAATc                                                    >  1:593685/1‑140 (MQ=255)

                                                                                    gCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCaa                                                  <  1:1277275/140‑1 (MQ=255)

                                                                                    gCGGTCATATACTCGCCCGAAATCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCaa                                                  <  2:600012/140‑1 (MQ=255)

                                                                                      ggTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAaca                                                <  1:1327927/140‑1 (MQ=255)

                                                                                         cATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACgg                                             <  1:337950/140‑1 (MQ=255)

                                                                                         cATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACgg                                             <  1:20143/140‑1 (MQ=255)

                                                                                         cATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACgg                                             <  2:328601/140‑1 (MQ=255)

                                                                                         cATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACgg                                             <  2:1495069/140‑1 (MQ=255)

                                                                                         cATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACgg                                             <  2:152961/140‑1 (MQ=255)

                                                                                           tataCTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTg                                           <  1:366444/140‑1 (MQ=255)

                                                                                            ataCTCGCCGGAAAGCCACATTAAAAGTATAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTgg                                          <  1:513239/140‑1 (MQ=255)

                                                                                                 cGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTCTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTa                                     <  2:194163/140‑1 (MQ=255)

                                                                                                  gCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACgg                                             <  1:18523/131‑1 (MQ=255)

                                                                                                  gCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACgg                                             >  2:18523/1‑131 (MQ=255)

                                                                                                  gCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTaa                                    >  1:778788/1‑140 (MQ=255)

                                                                                                  gCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTaa                                    >  2:1441339/1‑140 (MQ=255)

                                                                                                    cGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAag                                  >  1:1250848/1‑140 (MQ=255)

                                                                                                    cGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAag                                  >  1:1283167/1‑140 (MQ=255)

                                                                                                        aaGCCACATTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGAt                              <  2:1241611/140‑1 (MQ=255)

                                                                                                             acaTTAAAAGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCt                         <  2:778788/140‑1 (MQ=255)

                                                                                                                 tAAAAGTACAAACAGCAGTGCGATGACCAGGCTGCAAAAATAGACATTGAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGc                     <  2:637789/140‑1 (MQ=255)

                                                                                                                   aaaGTACAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAg                   <  1:101813/140‑1 (MQ=255)

                                                                                                                        aCAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGacaac              >  2:1519217/1‑140 (MQ=255)

                                                                                                                        aCAAACAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGacaac              <  1:1441339/140‑1 (MQ=255)

                                                                                                                           aaCAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACGCGGTGGAAGTAAAGAGATCGGGTCCGCAGACAAcaca           >  1:560026/1‑140 (MQ=255)

                                                                                                                           aaCAGCAGTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAAcaca           <  2:871218/140‑1 (MQ=255)

                                                                                                                                cagTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGaa      >  2:1133992/1‑140 (MQ=255)

                                                                                                                                cagTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGaa      >  2:80664/1‑140 (MQ=255)

                                                                                                                                 agTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAAcaca           <  1:90929/134‑1 (MQ=255)

                                                                                                                                 agTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAAcaca           >  2:90929/1‑134 (MQ=255)

                                                                                                                                 agTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAAt     <  1:64155/140‑1 (MQ=255)

                                                                                                                                 agTGCGCTGACCAGGCTGCCAACATTGACCTTTAGCCTGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAAt     <  1:455141/140‑1 (MQ=255)

                                                                                                                                  gTGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATc    <  2:69852/140‑1 (MQ=255)

                                                                                                                                   tGCGCTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCa   >  2:1018988/1‑140 (MQ=255)

                                                                                                                                    gcgcTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAg  <  1:1519217/140‑1 (MQ=255)

                                                                                                                                    gcgcTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAg  >  2:1457794/1‑140 (MQ=255)

                                                                                                                                    gcgcTGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAg  >  2:1071862/1‑140 (MQ=255)

ATACCAAGACAGACGGCCTCAATAAAAGTATGGTGCACTTTGTGGTCGGCGGTTTGTAGGACGTTTAGTCCCCATTGACCATTTGCGGTCATATACTCGCCGGAAAGCCACATTAAAAGTACAAACAGCAGTGCGCCGACCAGGTTGCCAAAATAGACATTTAGCCAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAG  >  NC_000913/953961‑954232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`