BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,272,154	C→T	S12S (AGC→AGT)	chaB →	putative cation transport regulator ChaB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,272,154	0	C	T	100.0%	384.6 / NA	115	S12S (AGC→AGT)	chaB	putative cation transport regulator ChaB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (54/61); total (54/61)

Only 100 of 119 total aligned reads displayed.

AGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGCGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATAAAGTGGCCTGGG  >  NC_000913/1272018‑1272290

aGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTa                                                                                                                                       >  1:1370235/1‑140 (MQ=255)

       ctTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACg                                                                                                                                <  1:1263455/140‑1 (MQ=255)

        ttAAGAAGAGTCTGAGCTGAAATTTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGt                                                                                                                               <  1:490509/140‑1 (MQ=255)

                agTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAGAGCGATCGGCCCGATAGTGTAAAGCACGTTCTACCGt                                                                                                                       >  1:469220/1‑140 (MQ=255)

                 gTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGtc                                                                                                                      >  1:37367/1‑140 (MQ=255)

                  tCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACg                                                                                                                                <  1:1383949/129‑1 (MQ=255)

                  tCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGtct                                                                                                                     <  1:1540152/140‑1 (MQ=255)

                  tCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGtct                                                                                                                     <  1:817109/140‑1 (MQ=255)

                  tCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGtct                                                                                                                     >  1:697637/1‑140 (MQ=255)

                  tCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGtct                                                                                                                     >  1:145106/1‑140 (MQ=255)

                  tCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGtct                                                                                                                     >  1:1412029/1‑140 (MQ=255)

                  tCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGtct                                                                                                                     <  2:1370235/140‑1 (MQ=255)

                  tCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGtct                                                                                                                     >  1:104028/1‑140 (MQ=255)

                    tGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCa                                                                                                                   >  1:1156813/1‑140 (MQ=255)

                    tGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCa                                                                                                                   >  2:1413010/1‑140 (MQ=255)

                      aCCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATg                                                                                                                 >  2:1525312/1‑140 (MQ=255)

                       ccTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGc                                                                                                                <  2:104028/140‑1 (MQ=255)

                        cTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGcc                                                                                                               <  2:1156813/140‑1 (MQ=255)

                        cTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGcc                                                                                                               <  1:1485367/140‑1 (MQ=255)

                        cTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGcc                                                                                                               <  1:991389/140‑1 (MQ=255)

                        cTGAAAATTCTTATGCTTTGGCTAGCGTACATATTGTAGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGcc                                                                                                               <  1:407502/140‑1 (MQ=255)

                        cTGAAAATTCTTATGCTTTGGCTAGAGTAAATATTGTCGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGcc                                                                                                               <  1:565743/140‑1 (MQ=255)

                        cTGAAAATTCTTATGATTTGGCCAGCGTATATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGcc                                                                                                               <  1:661267/140‑1 (MQ=255)

                           aaaaTTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAATTGTAAAGCCCGTTGTACCGTCTCATGCCCAg                                                                                                            >  2:656531/1‑140 (MQ=255)

                           aaaaTTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGccc                                                                                                              <  2:767861/138‑1 (MQ=255)

                           aaaaTTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGccc                                                                                                              >  1:767861/1‑138 (MQ=255)

                           aaaaTTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAg                                                                                                            >  1:928128/1‑140 (MQ=255)

                              aTTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGat                                                                                                         <  1:1199098/140‑1 (MQ=255)

                                tCTTATGTTTTGGCAAGAGTAGATATTGTTGGCCACACTTAATGTTCAGCTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGatat                                                                                                       <  2:714570/140‑1 (MQ=255)

                                  ttATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATGTGCCGGAACGTGGAAAGCACGTTCTACCGTCTCATGCCCAGGATATCt                                                                                                     >  2:459672/1‑140 (MQ=255)

                                     tGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCtata                                                                                                  >  1:1473659/1‑140 (MQ=255)

                                        tttGGCAAAAGTAGATGTTGTTTACCACACGAAATTTTCGACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAaag                                                                                               <  2:754821/140‑1 (MQ=255)

                                         ttGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAaaga                                                                                              >  2:1379703/1‑140 (MQ=255)

                                                   tAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAAc                                                                                    <  2:147522/140‑1 (MQ=255)

                                                     gATATTGTTGACCACTCTTAATCTTTAACATTGTAAACGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAg                                                                                  <  1:459672/140‑1 (MQ=255)

                                                     gATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAg                                                                                  <  2:1473659/140‑1 (MQ=255)

                                                       tatTGTTGACCACACTTAATGTTCAACTTGGTAAAAGTAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAgca                                                                                <  1:705488/140‑2 (MQ=255)

                                                        atTGTTGACCACACTGAATGTTCAACTTTGTAAAAGGCGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAgcgc                                                                               <  1:656531/140‑1 (MQ=255)

                                                         ttgttgACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCa                                                                              <  2:1289481/140‑1 (MQ=255)

                                                         ttgttgACCACACTTAACGTTCCACTTTGTATAAGTAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCa                                                                              <  2:469220/140‑1 (MQ=255)

                                                          tgttgACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCAt                                                                             <  1:1026571/140‑1 (MQ=255)

                                                           gttgACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATg                                                                            >  2:1243172/1‑140 (MQ=255)

                                                           gttgACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATg                                                                            >  2:1061958/1‑140 (MQ=255)

                                                           gttgACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATg                                                                            >  2:1361729/1‑140 (MQ=255)

                                                            ttgACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCg                                                                                          <  2:1127459/125‑1 (MQ=255)

                                                            ttgACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCg                                                                                          >  1:1127459/1‑125 (MQ=255)

                                                             tgACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATggg                                                                          >  2:1167416/1‑140 (MQ=255)

                                                             tgACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATggg                                                                          >  1:974397/1‑140 (MQ=255)

                                                               aCCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGAt                                                                        >  2:1265435/1‑140 (MQ=255)

                                                               aCCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGAt                                                                        >  2:1320294/1‑140 (MQ=255)

                                                               aCCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGAt                                                                        <  2:931547/140‑1 (MQ=255)

                                                               aCCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGAt                                                                        <  1:1361729/140‑1 (MQ=255)

                                                               aCCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGAt                                                                        <  1:1320294/140‑1 (MQ=255)

                                                               aCCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTACAACAGCGCATGGGAt                                                                        >  1:247030/1‑140 (MQ=255)

                                                                ccACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGGCTCATGCCTAGGATATTTATAAAGAAGCGTTCAACAGCGCATGGGATc                                                                       >  2:602282/1‑140 (MQ=255)

                                                                ccACACTTAATGTTCAACTCTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATc                                                                       <  2:1285616/140‑1 (MQ=255)

                                                                    acTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAata                                                                   >  2:765113/1‑140 (MQ=255)

                                                                     cTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAatat                                                                  <  2:849894/140‑1 (MQ=255)

                                                                     cTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAatat                                                                  <  2:1403385/140‑1 (MQ=255)

                                                                     cTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAatat                                                                  <  2:697637/140‑1 (MQ=255)

                                                                     cTTAATGTTCAACTTTGTAAAACGACTCAGCGATGCCCTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAatat                                                                  <  1:602282/140‑1 (MQ=255)

                                                                     cTTAATGTTCAACTTTGTAAAACGACTCACCGATGCCATATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAatat                                                                  <  1:412282/140‑1 (MQ=255)

                                                                     cTTAATGTTCAACTTTGAAAAACGAGTCAACTATGCCGTCTAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAatat                                                                  <  2:465588/140‑1 (MQ=255)

                                                                      ttAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAatat                                                                  >  2:246587/1‑139 (MQ=255)

                                                                      ttAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAatat                                                                  <  1:246587/139‑1 (MQ=255)

                                                                       tAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATataa                                                                <  2:1397585/140‑1 (MQ=255)

                                                                        aaTGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTAATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCa                                                                              <  2:145227/125‑1 (MQ=255)

                                                                        aaTGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTAATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCa                                                                              >  1:145227/1‑125 (MQ=255)

                                                                          tGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATataaaga                                                             <  2:145106/140‑1 (MQ=255)

                                                                              cAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGGAGCGTTCTACAACGTATGGGATCAATataaagataaa                                                         >  1:465588/1‑140 (MQ=255)

                                                                              cAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACATCGCATGGGATCAATataaagataaa                                                         >  1:642612/1‑140 (MQ=255)

                                                                              cAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAatat                                                                  >  1:1527238/1‑131 (MQ=255)

                                                                              cAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAatat                                                                  <  2:1527238/131‑1 (MQ=255)

                                                                              cAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGAGATCTATAAGGAAACGTGCAACAGCGTATGGGATCAATataaagactgt                                                         >  2:416512/1‑136 (MQ=255)

                                                                              cAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGAAATCTATAACGAAACGTTCAACAGCGTATGGTATCAATataaagataaa                                                         >  2:635850/1‑140 (MQ=255)

                                                                                aCTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATAtaaagataaaga                                                       >  2:944736/1‑140 (MQ=255)

                                                                                    tGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGAt                                                   >  2:145786/1‑140 (MQ=255)

                                                                                              gTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGtgatg                                         >  2:1369583/1‑140 (MQ=255)

                                                                                              gTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGtgatg                                         >  1:1000869/1‑140 (MQ=255)

                                                                                              gTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATAGAAAGATAAAAAAGATCGGCGtgatg                                         >  1:493425/1‑140 (MQ=255)

                                                                                               tCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCATTATAAAGATAAAGAAGATCGGCGtgatga                                        >  1:1411726/1‑140 (MQ=255)

                                                                                                  aCGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGc                                     <  1:1369583/140‑1 (MQ=255)

                                                                                                                aaCGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATAGGCGTGATGACGCAAGTGGGGAAGaaa                       >  1:967668/1‑140 (MQ=255)

                                                                                                                  cGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAAcc                     >  2:306325/1‑140 (MQ=255)

                                                                                                                  cGAAAAGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGAAAAACAAGTCCGGCGTGATGACGCCAGTCGCGAAGAAAcc                     >  2:735907/1‑140 (MQ=255)

                                                                                                                     aaaGCGATCTGCCGGTAAGTGTCAAGCACCTTCTACCTTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACcgcg                  <  1:657944/140‑1 (MQ=255)

                                                                                                                     aaaGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACcgcg                  >  2:1346294/1‑140 (MQ=255)

                                                                                                                     aaaGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACcgcg                  >  1:1359138/1‑140 (MQ=255)

                                                                                                                     aaaGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATAGAAAGATAAAGAAGATCCGCGTGATGCCGCCGGTCGCGAAGAAACcgcg                  >  2:657944/1‑140 (MQ=255)

                                                                                                                      aaGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCgcgc                 <  1:1140985/140‑1 (MQ=255)

                                                                                                                      aaGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCgcgc                 <  1:1357274/140‑1 (MQ=255)

                                                                                                                       aGCGATCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCa                <  1:1265435/140‑1 (MQ=255)

                                                                                                                           aTCTGCCGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATaaa            <  1:1243172/140‑1 (MQ=255)

                                                                                                                           aTCTGCCCGCAAGCGTAAAGCACGTTCTACCGCCTCCTGCCCAGGATATCGCTAAAGAAGCGTTCAACAGCGCATGCGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGACGCGAAGAAACCGCGCATaaa            <  2:967668/140‑1 (MQ=255)

                                                                                                                                ccGGAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATAAAGTGGc       <  1:1413010/140‑1 (MQ=255)

                                                                                                                                  ggAAAGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATAAAGTGGCCt     >  2:939796/1‑140 (MQ=255)

                                                                                                                                     aaGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATAAAGTGGCCTggg  <  1:1525312/140‑1 (MQ=255)

                                                                                                                                     aaGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATAAAGTGGCCTggg  <  1:765113/140‑1 (MQ=255)

                                                                                                                                     aaGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATAAAGTGGCCTggg  <  1:939796/140‑1 (MQ=255)

                                                                                                                                     aaGTGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATAAAGTGGCCTggg  <  2:1359138/140‑1 (MQ=255)

AGCGTCTCTTAAGAAGAGTCTGACCTGAAAATTCTTATGTTTTGGCAAGAGTAGATATTGTTGACCACACTTAATGTTCAACTTTGTAAAAGGAGTCAACGATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGCGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATAAAGTGGCCTGGG  >  NC_000913/1272018‑1272290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`