BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,545,775	T→C	N85S (AAC→AGC)	yddL ←	putative uncharacterized protein YddL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,545,775	0	T	C	100.0%	461.9 / NA	128	N85S (AAC→AGC)	yddL	putative uncharacterized protein YddL
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (63/65); total (63/65)

Only 100 of 130 total aligned reads displayed.

ATATGGTTGTCGTTTAAAGTGATTGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGTTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTAAAATAACGTA  >  NC_000913/1545647‑1545907

atatGGTTGTCGTTTAAAGTGATTGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTa                                                                                                                           <  1:186768/140‑1 (MQ=255)

  atGGTTGTCGTTTAAAGTGATTGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTaaa                                                                                                                         <  1:757729/140‑1 (MQ=255)

  atGGTTGTCGTTTAAAGTGATTGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTaaa                                                                                                                         <  2:1220953/140‑1 (MQ=255)

    ggTTGTCGTTTAAAGAGATTGTCTTCATCGTGGGATGCTTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAAt                                                                                                                       <  1:433821/140‑1 (MQ=255)

        gTCGTTTAAAGTGATTGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCCAGCCGTTTGCTGCATCGCTATCGCCTTTAAAATCata                                                                                                                   >  1:723264/1‑140 (MQ=255)

           gTTTAAAGTGATTGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTc                                                                                                                >  2:837771/1‑140 (MQ=255)

           gTTTAAAGTGATTGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTc                                                                                                                >  1:1240601/1‑140 (MQ=255)

              tAAAGTGATTGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCGGCGCGAGCGGTTGGCTACATCGCTAGAGCCATTAAAATCATATTCCCa                                                                                                             >  2:406777/1‑140 (MQ=255)

              tAAAGTGAATGTTTTCAACCTGTGATGATTGAGAAATATAAGGTCAGTTATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCa                                                                                                             <  2:723264/140‑1 (MQ=255)

                      ttGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCaa                                                                                                     <  1:1462808/140‑1 (MQ=255)

                       tGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCGGTTGGCTTGATCACTAGAGCCTTTAGAATCATATTCCCAGTGACCaaa                                                                                                    >  2:517148/1‑140 (MQ=255)

                       tGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCaaa                                                                                                    >  1:1037774/1‑140 (MQ=255)

                                   gggATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTg                                                                                        >  1:284856/1‑140 (MQ=255)

                                        gatTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCAt                                                                                   >  1:858156/1‑140 (MQ=255)

                                         atTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCAtt                                                                                  >  2:291149/1‑140 (MQ=255)

                                           tgtgTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGa                                                                                <  2:1037774/140‑1 (MQ=255)

                                             tgtAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGAtt                                                                              >  2:324338/1‑140 (MQ=255)

                                             tgtAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGAtt                                                                              <  1:1323775/140‑1 (MQ=255)

                                              gtAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGAttt                                                                             >  2:81653/1‑140 (MQ=255)

                                               tAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTg                                                                            >  1:1455489/1‑140 (MQ=255)

                                                   ataAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGtt                                                                        <  1:291149/140‑1 (MQ=255)

                                                       ggTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGTCCAAAACAAATCATTTGATCAATGATTTGCGTTtctc                                                                    >  1:575218/1‑140 (MQ=255)

                                                       ggTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATGATCTGATCATTGATTTGCGTTtctc                                                                    >  1:636681/1‑140 (MQ=255)

                                                       ggTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGAtt                                                                              >  2:234526/1‑130 (MQ=255)

                                                       ggTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGAtt                                                                              <  1:234526/130‑1 (MQ=255)

                                                       ggTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTtctc                                                                    >  2:363131/1‑140 (MQ=255)

                                                       ggTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTtctc                                                                    >  2:1067996/1‑140 (MQ=255)

                                                       ggTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTtctc                                                                    >  2:1514375/1‑140 (MQ=255)

                                                       ggTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATAATATGATCAGTGATTTGCGTTtctc                                                                    >  1:394960/1‑140 (MQ=255)

                                                            gTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTa                                                               >  1:272016/1‑140 (MQ=255)

                                                            gTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTa                                                               >  2:1365816/1‑140 (MQ=255)

                                                            gTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTa                                                               >  1:358896/1‑140 (MQ=255)

                                                            gTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGAGCATTGATTTGCGTTTGTCCttga                                                               >  2:1429476/1‑138 (MQ=255)

                                                            gTGATCATATTGTGAT‑GGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCCTTGACTTGCGTTTCTCCTTTaa                                                              >  2:684142/1‑140 (MQ=255)

                                                             tGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTaa                                                              >  2:550566/1‑140 (MQ=255)

                                                             tGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTaa                                                              >  1:769440/1‑140 (MQ=255)

                                                                tCATATTGTGATGGGTACTTAATTCGATCAGAGATTCCTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGc                                                           <  1:723620/140‑1 (MQ=255)

                                                                tCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGc                                                           <  1:976197/140‑1 (MQ=255)

                                                                  atatTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTtctc                                                                    >  2:1367318/1‑129 (MQ=255)

                                                                  atatTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTtctc                                                                    <  1:1367318/129‑1 (MQ=255)

                                                                  atatTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTCATCATTGAGTTGCTTTTCTCCTTTAAAGCCg                                                         >  2:529508/1‑140 (MQ=255)

                                                                   tatTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCATTCAGTAGATCATTGATCTGCGGTTCTCCTTTAAAGCCga                                                        >  2:723995/1‑140 (MQ=255)

                                                                    atTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCgag                                                       <  2:1240601/140‑1 (MQ=255)

                                                                     ttGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCgaga                                                      <  2:358896/140‑1 (MQ=255)

                                                                      tgtgATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGAc                                                     >  1:1502919/1‑140 (MQ=255)

                                                                       gtgATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAATTCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACg                                                    >  1:1204874/1‑140 (MQ=255)

                                                                       gtgATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACg                                                    >  1:1402652/1‑140 (MQ=255)

                                                                       gtgATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACg                                                    >  1:674317/1‑140 (MQ=255)

                                                                       gtgATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACg                                                    <  2:1204874/140‑1 (MQ=255)

                                                                         gATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTGGATGATTGATTTGCGTGTCTCGTTTAAAGCCGAGACggg                                                  >  2:612032/1‑140 (MQ=255)

                                                                          aTGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGc                                                 >  2:1100362/1‑140 (MQ=255)

                                                                          aTGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGc                                                 >  2:10485/1‑140 (MQ=255)

                                                                          aTGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGc                                                 >  2:927395/1‑140 (MQ=255)

                                                                           tGGGCACTTAACTCAATCAGAGTTTTTTGCCGCGCGAACCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCa                                                <  1:406777/140‑1 (MQ=255)

                                                                            gggCACTTAACTCAATTGGAGAGTCTTGCCCTGGGAGCCGTTGGCTTCTTCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCAt                                               <  2:718274/140‑1 (MQ=255)

                                                                            gggCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCAt                                               <  1:929336/140‑1 (MQ=255)

                                                                            gggCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCAt                                               <  1:56309/140‑1 (MQ=255)

                                                                             ggCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATa                                              >  2:802673/1‑140 (MQ=255)

                                                                             ggCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATa                                              >  2:1240237/1‑140 (MQ=255)

                                                                             ggCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCACTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCgaga                                                      >  2:1042561/1‑132 (MQ=255)

                                                                             ggCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCACTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCgaga                                                      <  1:1042561/132‑1 (MQ=255)

                                                                              gCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATaa                                             >  1:1374844/1‑140 (MQ=255)

                                                                               cACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCAt                                               <  1:1065329/137‑1 (MQ=255)

                                                                                  ttAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCT‑CTTTAAAGCCGAGACGGGCATAAGtttt                                        >  1:96477/1‑140 (MQ=255)

                                                                                    aaCTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCa                                                >  2:1080845/1‑131 (MQ=255)

                                                                                    aaCTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCa                                                <  1:1080845/131‑1 (MQ=255)

                                                                                         aaTCAGAGATTCTTGACGCGCGTGCTGTTGGCTTCATTGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCAcc                                  <  1:723995/140‑1 (MQ=255)

                                                                                          aTCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCa                                 >  2:1534733/1‑140 (MQ=255)

                                                                                           tCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCATTTAAAGCCGAGGCGGGCATAAGTTTTATCACCAt                                >  2:570937/1‑140 (MQ=255)

                                                                                            cAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATc                               >  2:237775/1‑140 (MQ=255)

                                                                                            cAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATc                               >  2:1515882/1‑140 (MQ=255)

                                                                                              gagaTTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGt                             <  2:944155/140‑1 (MQ=255)

                                                                                              gagaTTCTTGCCGCGCGAGCCGGTGTCTTTATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGt                             <  1:529508/140‑1 (MQ=255)

                                                                                                gaTTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCa                           <  2:1455489/140‑1 (MQ=255)

                                                                                                gaTTCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCa                           <  1:324338/140‑1 (MQ=255)

                                                                                                   tCTTGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGc                        >  1:1163474/1‑140 (MQ=255)

                                                                                                     ttGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGAGGGGCATAAATTTTCTCACCATCGTCACGCtt                      >  2:606393/1‑140 (MQ=255)

                                                                                                     ttGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCtt                      >  2:1548401/1‑140 (MQ=255)

                                                                                                     ttGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCtt                      <  1:1534733/140‑1 (MQ=255)

                                                                                                     ttGCCGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCtt                      <  1:928441/140‑1 (MQ=255)

                                                                                                        ccGCGCGAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTatc                   <  1:1100362/140‑1 (MQ=255)

                                                                                                        ccGCGCGAGCCGTTGGCTTCATCGCCATACCCTTTAAGATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTatc                   <  1:471308/140‑1 (MQ=255)

                                                                                                        ccGCGCGAGCCGTTGCCTTCATCGCCATAACCTTTAACATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTatc                   <  1:425166/140‑1 (MQ=255)

                                                                                                           cgcgAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGATGGGCATAAGTTTTATCACCATCGTCACGCTTatcatc                <  2:284856/140‑1 (MQ=255)

                                                                                                             cgAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAg              >  1:1213407/1‑140 (MQ=255)

                                                                                                             cgAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAg              <  2:1491010/140‑1 (MQ=255)

                                                                                                             cgAGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAg              <  1:1514375/140‑1 (MQ=255)

                                                                                                             cgAGCCGTTGGCTTCATCGCTACAGTCTTAAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAg              <  1:731949/140‑1 (MQ=255)

                                                                                                               aGCCGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTa            <  1:363131/140‑1 (MQ=255)

                                                                                                               aGCCGTTGACTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTa            <  1:170611/140‑1 (MQ=255)

                                                                                                                 ccGTTGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTaaa          <  2:1402652/140‑1 (MQ=255)

                                                                                                                  cGTTGGCTTCATCGCTATAGCCCTTAAAATCTTATTCCCCGTGACCAACACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTaaaa         <  2:450124/140‑1 (MQ=255)

                                                                                                                    ttGGCTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTAAAATa       <  1:802144/140‑1 (MQ=255)

                                                                                                                        cTTCATCGCTATAGCGTTTAAATTCATATTCCCAGTGTCCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTAAAATAACGt   <  1:684142/140‑1 (MQ=255)

                                                                                                                        cTTCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTAAAATAACGt   <  2:896049/140‑1 (MQ=255)

                                                                                                                         ttCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTAAAATAACGTa  <  1:837771/140‑1 (MQ=255)

                                                                                                                         ttCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTAAAATAACGTa  <  1:81653/140‑1 (MQ=255)

                                                                                                                         ttCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTAAAATAACGTa  <  1:1365816/140‑1 (MQ=255)

                                                                                                                         ttCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTAAAATAACGTa  <  1:10485/140‑1 (MQ=255)

                                                                                                                         ttCATCGCTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTGAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTAAAATAACGTa  <  2:131745/140‑1 (MQ=255)

ATATGGTTGTCGTTTAAAGTGATTGTTTTCATCCTGGGATGATTGTGTAATATAAGGTCAGTGATCATATTGTGATGGGCACTTAACTCAATCAGAGATTCTTGCCGCGCGAGCCGTTGGCTTCATCGTTATAGCCTTTAAAATCATATTCCCAGTGACCAAAACCAATCATTTGATCATTGATTTGCGTTTCTCCTTTAAAGCCGAGACGGGCATAAGTTTTATCACCATCGTCACGCTTATCATCAGTAAAATAACGTA  >  NC_000913/1545647‑1545907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`