| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,033,739 | (T)8→9 | noncoding (91/91 nt) | rseX → | small regulatory RNA RseX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,033,731 | 1 | . | T | 93.8% | 425.0 / 16.5 | 130 | noncoding (83/91 nt) | rseX | small regulatory RNA RseX |
| Reads supporting (aligned to +/- strand): ref base . (6/2); new base T (68/54); total (74/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 134 total aligned reads displayed.
CGGCTTTATTAATTCATTTAATCAATATATTAGCACTGATTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑C‑‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACATATTGATATACATTTATAATTTTCATGAATATT > NC_000913/2033597‑2033859 | gCTTTATTAATTCATTTAATCAATATATTAGCACTGATTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGATTATATTGTTTGGGCCGGCATAATGCCG‑‑G‑C‑‑tt‑ttttt > 1:284072/1‑140 (MQ=255) ttaATTCATTTAATCAAAATATCAGCTCTGAGTACTATTGTACCTTTTAATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑C‑‑tt‑tttttttatgc < 2:275399/140‑6 (MQ=255) tCATTTAATCAATATATTAGCACTGATTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCa > 2:631944/1‑140 (MQ=255) cACTGATTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATcaca > 1:534450/1‑140 (MQ=255) cACTGATTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑C‑‑TT‑TTTTTTAA‑TGCCTACATTAAAGTGCGCCTGATcaca > 1:486061/1‑140 (MQ=255) cTGATTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑GCC‑‑TT‑TTTTTA‑A‑TGCCTTCGTTAATGTGCGCCTGATCACAcc > 2:367471/1‑140 (MQ=255) gATTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGGCTTGATGAATGTGAGCCTGATCACACCAg > 1:479805/1‑140 (MQ=255) gATTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAg < 1:634600/140‑1 (MQ=255) gATTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGAGGCCG‑‑G‑C‑‑TTGTTTATT‑A‑TGCCTTCATCAATGCGCGCCTGATCACACCAg > 2:310510/1‑140 (MQ=255) aTTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGGCG‑‑A‑CT‑TT‑TTTTTT‑A‑TGCCTTCTTTAATGTGCGCCTGAGCAGACCAGc > 1:636326/1‑140 (MQ=255) aTTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CTTTT‑TTTTTT‑T‑TGCCTTCATTAATTTGCGCCTGATCCCACCAg > 2:935817/1‑140 (MQ=255) aTTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCTTTCATTAATGTGCGCCTGATCACACCAGc > 1:362944/1‑140 (MQ=255) aTTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTgcg < 2:122666/125‑1 (MQ=255) aTTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGc > 2:230121/1‑140 (MQ=255) aTTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGc > 2:722369/1‑140 (MQ=255) aTTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGc > 1:169076/1‑140 (MQ=255) aTTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGc > 2:54571/1‑140 (MQ=255) taCCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGgcgc > 1:575349/1‑140 (MQ=255) taCCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGgcgc > 1:790950/1‑140 (MQ=255) taCCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGgcgc > 1:983368/1‑140 (MQ=255) taCCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTCCATTAATGTGCGCCAGATCACACCAGCCGTTTGgcgc > 1:390946/1‑140 (MQ=255) ttttATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑G‑TGCCTTCACTAAGGTGCGCCTGATCACACCCGCCGTTTGGCGcaacaa > 2:261660/1‑140 (MQ=255) ttttATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGtt > 1:75964/1‑129 (MQ=255) ttttATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGcaacaa > 1:536021/1‑140 (MQ=255) ttttATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCAATAATGTGAGCCTGATCACACCAGCCGTTTGGCGcaacaa > 2:318880/1‑140 (MQ=255) ttttATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑C‑‑TT‑TTTTTT‑ATTCCCTTCATTATTGTGCGCTTGTTCACACCAGCCGTTTGGCGcaacaa > 1:8677/1‑140 (MQ=255) tttATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAAt > 2:899176/1‑140 (MQ=255) tattatTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCa < 1:125172/140‑1 (MQ=255) ttattCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGACCACACCGGCCGTTTGGCGCAACAATCAtt > 1:332601/1‑140 (MQ=255) attCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGa < 2:790950/140‑1 (MQ=255) attCTGTGTCATGATGCTTCCGTTACTAGTCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGa < 1:310510/140‑1 (MQ=255) ttCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGTGCCTGATCCCACCAGCAGTTTGCCGCAACAATCATTGAt > 2:485898/1‑140 (MQ=255) cTGTGTCATGATGCTTCCGTTATTAGCCTTTAATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATAc < 2:362944/140‑1 (MQ=255) tgtCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGa > 1:802093/1‑134 (MQ=255) tgtCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGa < 2:802093/134‑1 (MQ=255) tgtCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATAcccc > 2:71091/1‑140 (MQ=255) tgtCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATAcccc > 2:546561/1‑140 (MQ=255) tgtCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATAcccc > 1:910387/1‑140 (MQ=255) tgtCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATAcccc > 1:507530/1‑140 (MQ=255) tgtCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATAcccc > 2:83674/1‑140 (MQ=255) tgtCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGAACACACCATCCGATTCGCGCAACAATCATTGATAcccc > 1:463428/1‑140 (MQ=255) gtCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTAGCGCAACAATCATTGATAccccc < 1:120664/140‑1 (MQ=255) tCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCt > 1:52852/1‑140 (MQ=255) cATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTa < 2:575349/140‑1 (MQ=255) tgatgCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACATCAGCCGTCTGGAGCTACAATCGTTGATACCCCCTATg > 1:481651/1‑140 (MQ=255) tgatgCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGa < 1:991834/129‑1 (MQ=255) tgatgCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATg > 1:121395/1‑140 (MQ=255) gatgCTTCCGTTATTAGCCTTTTATCGTCTTATTTATATATTTTGGGCGGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGt < 2:299861/140‑1 (MQ=255) cTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGttt > 1:709925/1‑138 (MQ=255) cTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGttt < 2:709925/138‑1 (MQ=255) cTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTct > 1:647921/1‑139 (MQ=255) cTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTcc < 2:762101/140‑1 (MQ=255) cTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTcc > 2:252720/1‑140 (MQ=255) cTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGCTTGACGCAACAATCATTTATACCCCCTATGTTTcc > 2:387238/1‑140 (MQ=255) tCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGc > 1:686268/1‑140 (MQ=255) ccGTTTTTAGCCTTTTTTCGTCTTTTTTTTATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 2:8677/140‑1 (MQ=255) ccGTTATTTGCCTTTTTGCGTCCTGTTTATGTTTTGTGGGCCGGCATGATGCTG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 2:481990/140‑1 (MQ=255) ccGTTATTCGCCTTTTATCGTCGTGTTTATGTTATTTGGTCCGGCATGTTGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 2:463428/140‑1 (MQ=255) ccGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGTGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 2:843742/140‑1 (MQ=255) ccGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 1:252720/140‑1 (MQ=255) ccGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 2:91096/140‑1 (MQ=255) ccGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 1:899176/140‑1 (MQ=255) ccGTTATTAGCCTTTCATCGTCCTGGTTATATTTTTTCGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 1:298902/140‑1 (MQ=255) cgtatttaGCTTTTTTTCGTTTTTTTAATATTTTTGGGGCGGGCTTGATCCCGCTT‑T‑‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 1:935817/135‑1 (MQ=255) gTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCa < 2:121395/140‑1 (MQ=255) attaGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 2:234538/135‑1 (MQ=255) attaGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt > 1:234538/1‑135 (MQ=255) ttaGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGTGCACCAATCATTGATAACCCCGATGTTTCCGCTCAACTc > 2:437097/1‑140 (MQ=255) ttaGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTc > 2:119351/1‑140 (MQ=255) taGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGTATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCa < 1:363566/140‑1 (MQ=255) taGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCa < 1:54571/140‑1 (MQ=255) taGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCa < 1:237779/140‑1 (MQ=255) taGCCTTTTATCGTCCTGTTTAGATGTTTCGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCa < 1:261660/140‑1 (MQ=255) aGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCAt < 1:3848/140‑1 (MQ=255) aGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCAt > 2:158344/1‑140 (MQ=255) aGCCTTTTATCGTCTTGGTTATGTTTTTTGGCCCGGCATCATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCAt < 2:390946/140‑1 (MQ=255) gCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATa < 1:119351/140‑1 (MQ=255) ccTTTTATCGTCTTGATTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATaa < 1:885752/140‑1 (MQ=255) ctttATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGTGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACa < 2:432325/139‑1 (MQ=255) tttATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACat > 1:855152/1‑140 (MQ=255) ttATCGTCTTGTTTATCTTTTTTGGGCCGGCTTCAGGCCA‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACata < 2:481651/140‑1 (MQ=255) ttATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 2:65520/126‑1 (MQ=255) ttATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACata > 2:632368/1‑140 (MQ=255) ttATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACata > 1:685425/1‑140 (MQ=255) ttATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑C‑‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 1:559916/125‑1 (MQ=255) ttATCGTCTTGTTTATATTTTTGGGGCCGACATGATGACG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACata < 1:367471/140‑1 (MQ=255) tATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACatat > 2:176100/1‑140 (MQ=255) aTCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt > 2:129213/1‑124 (MQ=255) aTCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCt < 1:129213/124‑1 (MQ=255) tCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCAt < 2:42989/128‑1 (MQ=255) tCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCAt > 1:42989/1‑128 (MQ=255) tCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCAt < 2:34421/128‑1 (MQ=255) tCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACATATTGata < 2:685425/140‑1 (MQ=255) tCTTGTTTATATTTTTTGGGCCGGCATGATGCCA‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATGCCCCCTATGTTTCCGCTCAACTCATAACATCTTGata < 2:22950/140‑1 (MQ=255) cTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACATATTGatat < 2:534450/140‑1 (MQ=255) ttGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACATATTGAtata < 2:983368/140‑1 (MQ=255) tttATATTTTTTGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACa > 1:331120/1‑127 (MQ=255) tttGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACATATTGATATACATTTATAAttt > 1:616444/1‑140 (MQ=255) tttGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACATATTGATATACATTTATAAttt > 2:636493/1‑140 (MQ=255) tttGGGCCGGCATGATGCCG‑‑G‑CT‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACATATTGATATACATTTATAAttt > 2:969239/1‑140 (MQ=255) | CGGCTTTATTAATTCATTTAATCAATATATTAGCACTGATTACAATTATACCTTTTTATTATTCTGTGTCATGATGCTTCCGTTATTAGCCTTTTATCGTCTTGTTTATATTTTTTGGGCCGGCATGATGCCG‑‑G‑C‑‑TT‑TTTTTT‑A‑TGCCTTCATTAATGTGCGCCTGATCACACCAGCCGTTTGGCGCAACAATCATTGATACCCCCTATGTTTCCGCTCAACTCATAACATATTGATATACATTTATAATTTTCATGAATATT > NC_000913/2033597‑2033859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |