| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,581,070 | (A)7→8 | intergenic (‑54/‑68) | ryhB ← / → yhhY | small regulatory RNA RyhB/N‑acetyltransferase YhhY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,581,063 | 1 | . | A | 93.4% | 345.0 / 13.9 | 106 | intergenic (‑47/‑75) | ryhB/yhhY | small regulatory RNA RyhB/N‑acetyltransferase YhhY |
| Reads supporting (aligned to +/- strand): ref base . (6/1); new base A (49/50); total (55/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
AAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑C‑AAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCATCAGGCAGATT > NC_000913/3580927‑3581197 | aaaaGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑C‑aaa < 1:958085/140‑1 (MQ=255) aaGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑C‑aaa‑a‑a < 1:201117/140‑1 (MQ=255) aGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑C‑aaa‑a‑aa > 2:246762/1‑140 (MQ=255) ctggctAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACt < 1:511283/140‑1 (MQ=255) tggctAAGTAATACTGGTAGCAGTGTGAGCATTGTCGTGTTTTCAGGTCCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTc < 2:303458/140‑1 (MQ=255) aaTACTGGAAGCAATCTGAGCACTGACGTCCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGaa < 1:297517/140‑1 (MQ=255) aCTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGt > 1:848021/1‑140 (MQ=255) cTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTc > 1:914939/1‑140 (MQ=255) gAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCTCTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAat > 1:790461/1‑140 (MQ=255) gAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAat > 2:789331/1‑140 (MQ=255) gAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAat > 2:942359/1‑140 (MQ=255) gAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAat > 2:909091/1‑140 (MQ=255) gAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGAATCGCATTGGAAAGTCAat > 1:167223/1‑140 (MQ=255) aGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTGCC‑AAA‑A‑AA‑ATGCAATTGACTCGCCTTTGAAAGTCAatga > 1:400957/1‑140 (MQ=255) aGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCa < 2:1020617/136‑1 (MQ=255) aGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCa > 1:1020617/1‑136 (MQ=255) aGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAatga > 1:562784/1‑140 (MQ=255) aGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAatga > 2:621204/1‑140 (MQ=255) aGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAatga > 2:32475/1‑140 (MQ=255) aGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ACGCATTTGACTCGCGTTTGAAAGTCAatga > 1:295677/1‑140 (MQ=255) aGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑C‑AAA‑A‑AAGATGCATTTGACTCGCATTTGAAAGTCAatga > 2:486451/1‑140 (MQ=255) aaTGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGt > 2:236432/1‑140 (MQ=255) aaTGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGt > 1:850742/1‑140 (MQ=255) aTGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGtt > 2:907868/1‑140 (MQ=255) tgtgAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCa > 1:575213/1‑131 (MQ=255) tgtgAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑C‑AAACA‑AA‑GTGCAATTGACTCACATTTCAAAGTCATTGATGTTg > 2:482697/1‑140 (MQ=255) gAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGaaa < 2:876917/140‑1 (MQ=255) gAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGaaa > 1:50420/1‑140 (MQ=255) aaTGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGa > 1:595245/1‑140 (MQ=255) aTGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGAc > 1:670636/1‑140 (MQ=255) tGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACa > 1:515069/1‑140 (MQ=255) gTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACAt < 1:791483/140‑1 (MQ=255) tGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTAc > 2:571376/1‑140 (MQ=255) gCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTAcc < 1:247852/140‑1 (MQ=255) gCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTAcc < 2:562784/140‑1 (MQ=255) ttCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCa < 1:213563/140‑1 (MQ=255) ttCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCa < 2:517209/140‑1 (MQ=255) ttCAGGTTCTCCGCGAGGGTCTCCCGGATTGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCa < 1:372846/140‑1 (MQ=255) tCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCaa > 2:152367/1‑140 (MQ=255) cAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCaaa < 1:32475/140‑1 (MQ=255) cAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCaaa < 2:187108/140‑1 (MQ=255) cAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCaaa < 2:62890/140‑1 (MQ=255) ttCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAgg < 1:246762/140‑1 (MQ=255) ttCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑C‑AAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGa < 1:777914/140‑1 (MQ=255) ttCTCCGCGAGGGTCGTCCTGACCGTGAGCCAATAATCATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAgg < 1:287515/140‑1 (MQ=255) ctcCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCTAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATCTTGAAATGGACATCTACCCCAAAGAGGAc > 1:491362/1‑140 (MQ=255) ctcCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACAtt > 2:507113/1‑125 (MQ=255) ctcCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACAtt < 1:507113/125‑1 (MQ=255) ctcCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGAc < 1:907868/140‑1 (MQ=255) tcCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACa > 2:520340/1‑140 (MQ=255) ccGCGAGGGTCTTCCTGGTCGCAAGACAATAATAACCATCCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACaa < 2:400957/140‑1 (MQ=255) ccGCGAGGGTCTTCCAGATCGCGAGTCAATAATAATCGTTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACaa < 1:482697/140‑1 (MQ=255) cgcgAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACaaa > 1:858387/1‑140 (MQ=255) cgcgAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACaaa > 1:985857/1‑140 (MQ=255) cgcgAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACaaa > 1:996286/1‑140 (MQ=255) gAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAGGGa < 1:621204/140‑1 (MQ=255) ggTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtg < 1:218236/140‑1 (MQ=255) tCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCTCTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgag < 2:790461/140‑1 (MQ=255) tCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgag < 1:236432/140‑1 (MQ=255) tCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgag < 1:909091/140‑1 (MQ=255) tCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgag < 2:914939/140‑1 (MQ=255) tCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgag < 1:723127/140‑1 (MQ=255) tCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgag < 1:571376/140‑1 (MQ=255) cTTCCTGATCGCGAGACTATAATAATCATTCTCATCCGCGCTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgagt < 2:274246/140‑1 (MQ=255) cTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgagt < 1:152367/140‑1 (MQ=255) cTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgagt < 1:58936/140‑1 (MQ=255) ttCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgagtg > 1:60006/1‑140 (MQ=255) tCCTGATCGCGAGACAAAAATAATCATTCTCATTCGCACGTGTCCAACGCTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgagtga < 2:365827/140‑1 (MQ=255) cTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTgaga < 2:985857/140‑1 (MQ=255) cTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTgaga < 1:158905/140‑1 (MQ=255) cTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTgaga < 2:543759/140‑1 (MQ=255) cTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTgaga < 1:942359/140‑1 (MQ=255) cTGATCGCGAGACAAGAATAATTATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTgaga < 1:389599/140‑1 (MQ=255) cTGATCGCGAGACAACAATAATCATCCTCCTTCGCACCTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTgaga < 1:293700/140‑1 (MQ=255) aTCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAg > 2:159357/1‑140 (MQ=255) tCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgagtga < 2:585483/134‑1 (MQ=255) tCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAAtgagtga > 1:585483/1‑134 (MQ=255) cgcgAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTa < 1:789331/140‑1 (MQ=255) cgcgAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTa > 2:527107/1‑140 (MQ=255) agaCAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAGGGGACATTAACCCCAAGGAGGACAAAGGAAAGAGTGAGATAGTAATAc > 2:312740/1‑140 (MQ=255) aataataatCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCa < 2:659350/140‑1 (MQ=255) aataatCATTCTCATTCGCACTTGTCGAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGc < 2:245096/140‑1 (MQ=255) atCATTCTCATTCGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGAAAAAGGATTGACTGCGATAGATATACGCCACGCAGaa > 1:423312/1‑140 (MQ=255) tcattctcattcGCAATTGTCCTACTCTTGTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGaaa < 1:336380/140‑1 (MQ=255) cattctcattcGCACTTGTACAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAAGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAac < 2:167223/140‑1 (MQ=255) attctcattcGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAaca > 1:97360/1‑140 (MQ=255) tctcattcGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAGAGAGGACAAAGGAATGCGTGAGATAATAATAAGCCACGCAGAAACACg > 2:442390/1‑140 (MQ=255) tctcattcGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCACAGAGGACAGAGGAATGAGTGAGATAGTAATGCGCCACGCAGAAACACg > 2:404528/1‑140 (MQ=255) tctcattcGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACg > 2:858455/1‑140 (MQ=255) tctcattcGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACg > 2:543435/1‑140 (MQ=255) tctcattcGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACg < 2:540683/140‑1 (MQ=255) ctcattcGCACTTGTCCAACACTTTTTG‑C‑AAA‑AGAA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACgg > 2:658032/1‑140 (MQ=255) attcGCACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGAt > 2:910251/1‑140 (MQ=255) cACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGa > 2:778237/1‑140 (MQ=255) cACTTGTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTAAGATAGTAATACGCCACGCAGAAACACGGGATTACGa > 1:364155/1‑140 (MQ=255) gTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGGTAGTAATACGCCACGCGGAAAAACGGGATTACGAGGCCa > 2:428511/1‑140 (MQ=255) gTCCAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCa > 2:649188/1‑140 (MQ=255) cAACACTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCATCa < 1:778237/140‑1 (MQ=255) acacTTTTTG‑CAAAA‑A‑AA‑ATGCCTTTGACCCGCATTTCAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCATCAgg < 1:486451/140‑1 (MQ=255) acTTTTTG‑CAAAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCATCAGGCa < 2:850742/140‑1 (MQ=255) | AAAAGCCAGCACCCGGCTGGCTAAGTAATACTGGAAGCAATGTGAGCAATGTCGTGCTTTCAGGTTCTCCGCGAGGGTCTTCCTGATCGCGAGACAATAATAATCATTCTCATTCGCACTTGTCCAACACTTTTTG‑C‑AAA‑A‑AA‑ATGCATTTGACTCGCATTTGAAAGTCAATGATGTTGAAAGGGACATTTACCCCAAAGAGGACAAAGGAATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCATCAGGCAGATT > NC_000913/3580927‑3581197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |