Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,202,630 | A→G | G784G (GGA→GGG) | yehI → | DUF4132 domain‑containing protein YehI |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,202,630 | 0 | A | G | 97.3% | 124.2 / NA | 37 | G784G (GGA→GGG) | yehI | DUF4132 domain‑containing protein YehI |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (17/19); minor base C (1/0); total (18/19) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TTCCAAAAGCCCCTGATTTCTGGCATCCGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCA‑GGGGG‑GACGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCAAAAGACAACTGGGCATTTCTGGCGTTAA > NC_000913/2202503‑2202766 | ttCCAAAAGCCCCTGATTTCTGGCATCCGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAg < 1:97409/140‑1 (MQ=255) ttCCAAAAGCCCCTGATTTCTGGCATCCGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAg > 2:554878/1‑140 (MQ=255) ttCCAAAAGCCCCTGATTTCCGGCATCCGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAg < 1:86594/140‑1 (MQ=255) cAAAAGCCCCTGATTTCTGGCATCCGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCgg < 1:229713/140‑1 (MQ=255) ccccTGATTTCTGGCATCCGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGAGAAATGCTGCGCATTACCCA‑GGGGGCGGCGGTTTTATAGCGGGCTGGa > 2:453025/1‑140 (MQ=255) cccTGATTTCTGGCATCCGCAAATGCGGTACAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGaa < 1:453025/140‑1 (MQ=255) cTGATTTCTGGCATCCGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGaaca < 1:126828/140‑1 (MQ=255) cGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTg < 1:792901/140‑1 (MQ=255) ttATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCttt < 1:781538/140‑1 (MQ=255) aCTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCt < 1:527459/140‑1 (MQ=255) ataatCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGa > 2:164484/1‑140 (MQ=255) taatCAAACTGTTACGAATGACGCTCTGGGAATTATCCGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGAt < 1:395190/140‑1 (MQ=255) aCTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCa > 1:61873/1‑140 (MQ=255) aCTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGACAGCTTTTGCCTGGGATCTCTTCa > 2:348423/1‑140 (MQ=255) cTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAATGTTCTGCCAGCCACAAACGCTGGCAGCTTTAGCCTGGGATCTCTTCAc > 2:468344/1‑140 (MQ=255) ttACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCACCTTTTGCCTGGGATCTCTTCACTGc > 1:366629/1‑140 (MQ=255) ttACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCAACACACGTTGGCAGCTATTGCCTGGGATCTCTTCACTGc > 2:348110/1‑140 (MQ=255) tACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCg > 1:733552/1‑140 (MQ=255) aCCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGt > 1:3583/1‑140 (MQ=255) aaTGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGc < 1:828035/140‑1 (MQ=255) aTGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGc > 2:552794/1‑134 (MQ=255) aTGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGc < 1:552794/134‑1 (MQ=255) gACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGTTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGcaac < 1:554878/140‑1 (MQ=255) gACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGt > 1:609898/1‑134 (MQ=255) gACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGt < 2:609898/134‑1 (MQ=255) cGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGc < 2:6962/135‑1 (MQ=255) cGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGc > 1:6962/1‑135 (MQ=255) tGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GCCGTTTTTATAGCGGCCTGGAACAACTGAAAACGTCCTGCCAGCCACAAACCCTGGCAGCTTTCGGCTTGGATCTCTTCACACCGTGGCAACAAGCTgg > 2:470477/1‑140 (MQ=255) aTTATCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGccc < 2:846640/140‑1 (MQ=255) aTCGGCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCg < 1:83149/140‑1 (MQ=255) gCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATGTCTTCACTGCGCGGGAACAAGATGGTGCCCCCGCaaa > 1:434838/1‑140 (MQ=255) gCGAAATGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCaaa > 1:720244/1‑140 (MQ=255) aaTGCTGCGCTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCAAAAGAc < 2:720244/140‑1 (MQ=255) cgcTTTACCCAGGGGGG‑GGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACCAGCCGGGGCCCCCGCAAAAGACAACTggg > 1:361571/1‑140 (MQ=255) cccagggggg‑gGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCAAAAGACAACTGGGCATTTCt < 2:3583/135‑1 (MQ=255) cccagggggg‑gGCGTCTTTATAGCGAGCTAGAACAACCGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCAAAAGACAACTGGGCATTTCt < 1:407742/135‑1 (MQ=255) agggggg‑gGCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCAAAAGACAACTGGGCATTTCTGGc > 1:974278/3‑140 (MQ=255) gg‑ggCGTTTTTATAGCGTGCTGGAACAACTGAAAATGTTTTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCAAAAGACAACTGGGCATTTCTGGCGTTaa < 2:466023/140‑1 (MQ=255) gg‑ggCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGTAACAAGCTGGTGCCCCAGCAAAAGATAACTAGGCATTTCTGGCGTTaa > 2:420025/1‑140 (MQ=255) gg‑ggCGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCAAAAGACAACTGGGCATTTCTGGCGTTaa > 2:626763/1‑140 (MQ=255) | TTCCAAAAGCCCCTGATTTCTGGCATCCGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCA‑GGGGG‑GACGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCAAAAGACAACTGGGCATTTCTGGCGTTAA > NC_000913/2202503‑2202766 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |