| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,324,731 | A→T | D208V (GAT→GTT) | atoA → | acetyl‑CoA:acetoacetyl‑CoA transferase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,324,731 | 0 | A | T | 97.8% | 152.3 / NA | 46 | D208V (GAT→GTT) | atoA | acetyl‑CoA:acetoacetyl‑CoA transferase subunit beta |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (19/26); minor base C (0/1); total (19/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGATCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACTGATCTTTGCCATGTTGCTGACATTGCTAACATTCGTGA > NC_000913/2324598‑2324855 | gTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGGCAAAACAAAAGCTCGGGTTGAAGTCGCCGCCGTTCTGaa > 2:431053/1‑140 (MQ=255)gTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGaa < 1:195594/140‑1 (MQ=255) atatGCTGGTTACTGAACTGGCGGTCTTTTGTTTTATCGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACg < 1:463612/140‑1 (MQ=255) atGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCa > 2:235980/1‑140 (MQ=255) atGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCATGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCa < 2:785034/140‑1 (MQ=255) atGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCATGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCa > 1:785034/1‑140 (MQ=255) gCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAAc > 1:76792/1‑140 (MQ=255) ggTTACTGAACTGGCTGTCTTTGGTTTTAATGACGGCGAAATGTGGCTCCCCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACggg < 1:339556/140‑1 (MQ=255) ggTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACggg < 1:235980/140‑1 (MQ=255) ggTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACggg > 2:36634/1‑140 (MQ=255) ggTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACggg > 2:68704/1‑140 (MQ=255) ggTTACTGAACTGGCAGTCTTTAGTCTTAATGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACggg < 1:478491/140‑1 (MQ=255) gTTACTGGACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACgggg < 2:854389/140‑1 (MQ=255) gTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACgggg < 1:589641/140‑1 (MQ=255) gTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACgggg < 1:595425/140‑1 (MQ=255) gTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACgggg < 2:596641/140‑1 (MQ=255) gTTACTGAACTGGCTATCTTTCCTTATATAGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACgggg < 1:431053/140‑1 (MQ=255) tGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACACAAGCTCGGCTTGAACTCGCCGCCGTCCTGAATACGCAACGGGGTGAtt > 2:436548/1‑140 (MQ=255) tGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGa < 1:830473/140‑1 (MQ=255) tGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGa > 1:94935/1‑140 (MQ=255) gCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGAtt > 1:771102/1‑140 (MQ=255) cTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGAt > 2:530209/1‑134 (MQ=255) cTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGAt < 1:530209/134‑1 (MQ=255) cTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCg > 1:830613/1‑140 (MQ=255) tATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTACCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACTGGGTGATTTATGATTGGTCGCATATcgcg > 1:566516/1‑140 (MQ=255) aTTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGt < 2:838699/140‑1 (MQ=255) gCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGa < 2:245366/140‑1 (MQ=255) gCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGt < 2:76792/140‑1 (MQ=255) gCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGt < 1:36634/140‑1 (MQ=255) cGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCg > 1:1017809/1‑140 (MQ=255) aTTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTgg < 2:94935/140‑1 (MQ=255) tgtcGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCt < 2:115812/137‑1 (MQ=255) aCGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCg < 1:630257/140‑1 (MQ=255) tgtgATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCa < 2:771102/140‑1 (MQ=255) gtgATTTAGCCACCGGGCGTGCCAAGACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCAc < 1:335821/140‑1 (MQ=255) aGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACt < 2:77318/134‑1 (MQ=255) aGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACt > 1:77318/1‑134 (MQ=255) cgtgcgtgCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACTGATCTTTGCCAt > 2:738815/1‑140 (MQ=255) cgtgcgtgCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTATCAGCCGGTGGATTGCCGATCGACTGATCTTTGCCAt > 1:257623/1‑140 (MQ=255) cgtgcgtgCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTACGACGCGTTATGTCAGCCGGTGGCTTTCCGAACCACTGATCTTTGCCAt > 2:315687/1‑140 (MQ=255) ccAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACTGATCTTTGCCATGTTGCTGa < 1:738815/140‑1 (MQ=255) aaaaCAGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACTGATCTTTGCCATGTTGCTGACa < 1:68704/140‑1 (MQ=255) aGAAGCTCGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACTGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACTGATCTTTGCCATGTTGCTGACATTGCt < 2:566516/140‑1 (MQ=255) cGGTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCTACTGATCCTTGCCACGTTGCTGACATTTCTAACATTc > 1:320623/1‑140 (MQ=255) gTTTGAAGTCGCCGCCGTTCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCCTCCCGATCGACTGATCTTTGCCATGCTGCTTACATTGCTAACATTCGt > 2:423168/1‑140 (MQ=255) ttGAAGTCGCCGCCGCTCTGAACACCCAAAGGGGTGAATTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACTGATCTTTGCCATGTTGCTGACATTGCTAACATTCGTGa < 1:315687/140‑1 (MQ=255) | GTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGATCTGAATACGCAACGGGGTGATTTATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACTGATCTTTGCCATGTTGCTGACATTGCTAACATTCGTGA > NC_000913/2324598‑2324855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |