Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,835,396 T→C K178K (AAA→AAG yicJ ← putative xyloside transporter YicJ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,835,3960TC98.4% 212.7 / ‑4.7 65K178K (AAA→AAGyicJputative xyloside transporter YicJ
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (35/28);  total (35/30)
Fisher's exact test for biased strand distribution p-value = 4.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01

AAATCTTCCCGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGTTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGTCATTGGTGATTACACCACCCAAT  >  NC_000913/3835268‑3835534
                                                                                                                                |                                                                                                                                          
aaaTCTTCCCGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCAcc                                                                                                                                 <  1:17367/140‑1 (MQ=255)
aaaTCTTCCCGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCAcc                                                                                                                                 <  1:245926/140‑1 (MQ=255)
 aaTCTTCCCGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGCGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCg                                                                                                                                >  1:722012/1‑140 (MQ=255)
  aTCTTCCCGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCAcc                                                                                                                                 <  2:893039/138‑1 (MQ=255)
  aTCTTCCCGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCAcc                                                                                                                                 >  1:893039/1‑138 (MQ=255)
     ttCCCGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCaa                                                                                                                            <  1:726748/140‑1 (MQ=255)
      tCCCGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCaat                                                                                                                           >  2:842850/1‑140 (MQ=255)
       cccGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGCGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCaatt                                                                                                                          <  2:722012/140‑1 (MQ=255)
        ccGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGATACCGAGGGGCTTAGTATCACCGctgtctc                                                                                                                         >  1:329846/1‑134 (MQ=255)
        ccGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCCCCCTGGAAACCCAGCGGCTTAATATCACCGCCaatta                                                                                                                         >  1:443064/1‑140 (MQ=255)
          gCATAGACGTTGTTGTACGTGGCGCTTCAACACGTCCTTCAGTGGTGACGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCaattaaa                                                                                                                       <  2:263341/140‑1 (MQ=255)
                      ttgtAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAGAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGc                                                                                                           <  1:814465/140‑1 (MQ=255)
                      ttgtAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGc                                                                                                           <  1:10681/140‑1 (MQ=255)
                      ttgtAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGc                                                                                                           <  1:256987/140‑1 (MQ=255)
                          aGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGcatca                                                                                                       >  2:57390/1‑140 (MQ=255)
                           ggtggtGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGcatcat                                                                                                      >  1:688204/1‑140 (MQ=255)
                            gtggtgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCatcatc                                                                                                     >  1:58542/1‑140 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGGGTGGCTTACTATGACCGCCAATTAAATTAAACAGTGGCATCATCAGaa                                                                                                 >  2:324289/1‑140 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGCGTGGCTTAATATCACCACCAATTAATTTAACCAGTGGCATCATCAGaa                                                                                                 >  2:390011/1‑140 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTTTCACCGCGAATAAAATTAACCGGTGGCATCATCAGaa                                                                                                 >  1:403467/1‑140 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGaa                                                                                                 >  1:886644/1‑140 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGaa                                                                                                 <  2:542243/140‑1 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGaa                                                                                                 >  2:111088/1‑140 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGaa                                                                                                 >  2:159983/1‑140 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGaa                                                                                                 >  1:697945/1‑140 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGaa                                                                                                 <  2:849419/140‑1 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGaa                                                                                                 >  1:35703/1‑140 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGaa                                                                                                 >  2:712765/1‑140 (MQ=255)
                                tgCTTCAACGCGTTCTTTAGCGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGAGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGaa                                                                                                 >  2:759066/1‑140 (MQ=255)
                                 gCTTCAACGCGTTCTTTAGTGGTGATGAACCAAAATGGCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAAc                                                                                                <  1:390011/140‑1 (MQ=255)
                                       aCGCGTTCTTTAGTGGTAAAGATAGAAAATGACAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGa                                                                                          <  2:403467/140‑1 (MQ=255)
                                            ttCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTACATTAACCAGTGGGATCATCAGAACAGTAGAAAGCa                                                                                     >  2:400540/1‑140 (MQ=255)
                                             tCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCAt                                                                                    <  2:58542/140‑1 (MQ=255)
                                              cTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATg                                                                                   <  1:902832/140‑1 (MQ=255)
                                                  aGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGccct                                                                               <  1:712765/140‑3 (MQ=255)
                                                       tgAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCcgcg                                                                          <  1:253129/140‑1 (MQ=255)
                                                         aagaaACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTTGCATCATCAGACCACTAGAAAGCATGCCTCCCGCGGt                                                                        >  1:358804/1‑140 (MQ=255)
                                                         aagaaACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCggc                                                                        >  2:11217/1‑139 (MQ=255)
                                                         aagaaACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGt                                                                        <  1:842850/140‑1 (MQ=255)
                                                         aagaaACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGt                                                                        >  1:65592/1‑140 (MQ=255)
                                                              aCAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTACCCAGTGGCGTCACCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCa                                                                   >  2:400414/1‑140 (MQ=255)
                                                                    tGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACaa                                                             <  2:907507/140‑1 (MQ=255)
                                                                    tGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACaa                                                             <  1:993350/140‑1 (MQ=255)
                                                                        aGCATCATGAATGCCTCCACGGCAACGACTGCGATACCGCCCTGGAAACCGAGTGGCTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGc                                                        <  1:261436/140‑1 (MQ=255)
                                                                          catcatGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGcc                                                       >  1:138733/1‑140 (MQ=255)
                                                                           atcatGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCa                                                      <  2:138733/140‑1 (MQ=255)
                                                                               tGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGAt                                                  >  2:124063/1‑140 (MQ=255)
                                                                                    gCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAg                                             >  1:682168/1‑140 (MQ=255)
                                                                                     ccaccaCGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCGTCCCGCGGTCGGCATCACAAAACGCCAGGATTGCAGc                                            >  1:486639/1‑140 (MQ=255)
                                                                                      caccacGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCg                                           >  2:162096/1‑140 (MQ=255)
                                                                                        aaacagAAAGAACCGCCATACCTCCCTGGAACCTGAGTGCCTTATTATCCCCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCgag                                         <  2:470669/135‑1 (MQ=255)
                                                                                         cacGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCgaga                                        <  1:124063/140‑1 (MQ=255)
                                                                                           cGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATa                                      >  1:501973/1‑140 (MQ=255)
                                                                                                   aCCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGt                              >  1:854421/1‑140 (MQ=255)
                                                                                                   aCCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGt                              >  1:756231/1‑140 (MQ=255)
                                                                                                   aCCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGt                              <  1:57390/140‑1 (MQ=255)
                                                                                                   aCCGCGATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGt                              >  1:197532/1‑140 (MQ=255)
                                                                                                     cgcgATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGTACAAAACTCCACGACTGCAGCAAGATACGCTGAGTct                            >  1:470669/1‑139 (MQ=255)
                                                                                                        gATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGt                         >  1:809244/1‑140 (MQ=255)
                                                                                                        gATACCGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGt                         <  2:756231/140‑1 (MQ=255)
                                                                                                             cGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGTCATTg                    >  2:35530/1‑140 (MQ=255)
                                                                                                             cGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGTCATTg                    <  2:854421/140‑1 (MQ=255)
                                                                                                             cGCCCTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGTCATTg                    <  1:162096/140‑1 (MQ=255)
                                                                                                               cccTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGTCATCGGt                  <  1:547304/140‑1 (MQ=255)
                                                                                                                 cTGGAAACCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGTCATTGGTGa                <  2:886644/140‑1 (MQ=255)
                                                                                                                 cTGGAAACCGAGTGGCAGATTACCACCGCCACTTAAATTAACCAGTGGGATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGTCATTGGTGa                <  2:443064/140‑1 (MQ=255)
                                                                                                                      aaCCGAGTGGCTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCCCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGTCATTGGTGATTaca           <  2:647032/140‑1 (MQ=255)
                                                                                                                               gTTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGTCATTGGTGATTACACCACCCAAt  <  1:177588/140‑1 (MQ=255)
                                                                                                                                |                                                                                                                                          
AAATCTTCCCGCATAGACGTTGTTGTAGGTGGTGCTTCAACGCGTTCTTTAGTGGTGAAGAAACAAAATGCCAGCATCATGAATGCCACCACGGAAAGGACCGCGATACCGCCCTGGAAACCGAGTGGTTTATTATCACCGCCAATTAAATTAACCAGTGGCATCATCAGAACAGTAGAAAGCATGCCTCCCGCGGTCGCCAGCACAAAACGCCAGGATTGCAGCGAGATACGCTGAGTCGGGTCATTGGTGATTACACCACCCAAT  >  NC_000913/3835268‑3835534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: