| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,487,255 | C→T | N346N (AAC→AAT) | lptF → | lipopolysaccharide transport system protein LptF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,487,255 | 0 | C | T | 98.8% | 271.9 / ‑4.4 | 83 | N346N (AAC→AAT) | lptF | lipopolysaccharide transport system protein LptF |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (45/37); total (46/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.67e-01 | |||||||||||
CAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACT > NC_000913/4487119‑4487385 | cagccaTGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCtt > 1:804409/1‑140 (MQ=255) tgctgcTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGac > 2:818152/1‑140 (MQ=255) gctgctGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGaca > 2:929632/1‑140 (MQ=255) ctgTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACAcccg > 1:44197/1‑138 (MQ=255) gTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGaca < 2:239817/134‑1 (MQ=255) gTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGaca > 1:239817/1‑134 (MQ=255) tCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGGTTTATCTGGCTTAAGCAATTGTTCTGAATCTTTGGGACACCGTGCCgg > 2:297031/1‑140 (MQ=255) tCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCgg < 2:713008/140‑1 (MQ=255) aCTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTcc > 2:706740/1‑140 (MQ=255) aCTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAAACTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTcc > 2:13019/1‑140 (MQ=255) ttttCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTccgc > 2:691792/1‑140 (MQ=255) ttttCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGGAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTccgc > 2:933758/1‑140 (MQ=255) tcttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTCGCTTTAGCGATTCTTCCCAATCTTTCGGACACCGTGCCGGTCcgccgc > 2:413994/1‑140 (MQ=255) tcttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAACTGGACCCGACGCTGTGGATGTGGACCGTTAACCCGATTTATTTGGCTTTAGCGATTGTTCTCCATCTTTGGGACACCGTGCCGGTCcgccgc > 2:712201/1‑140 (MQ=255) cttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGCTTGATCTGAATCTTTGTGACACCGTGCCGGTCCgccgcc > 2:385630/1‑140 (MQ=255) ttcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCgccgccc > 2:705093/1‑139 (MQ=255) tcCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTg < 1:691792/140‑1 (MQ=255) ccTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGGAAGCTGGACCCGACGCTGTGGATGTGGACCGATAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGCCCCCCGCCTgc > 1:879991/1‑140 (MQ=255) gATCCAGACCTCCCTTAAATCGCACTGCGTTAAAGGTCAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTgcgcg < 1:385630/140‑1 (MQ=255) tCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAGTCTTTGGGACATCGTGCCGGTCCGCCGCCCGCGCGcc > 1:489699/1‑140 (MQ=255) gACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGtt > 1:142506/1‑140 (MQ=255) gACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGtt > 1:888475/1‑140 (MQ=255) aCCTCCCTGAAATCGAACGGCGGTAAAGGTGAACTGGACCCGAAACGTTGGTATTGGGCCGTTAACCTTAATTATTTCGCTTTAGCGATTATTTTTAATCTTTGGGACACCCTTCCGGTCCCCCGCCGGCGCGCCCGttt > 2:747610/1‑140 (MQ=255) aCCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGttt > 1:821395/1‑140 (MQ=255) aCCTCCCTGAAATCGAACGGCGGTAAAAGGAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTTGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGgtt > 2:753353/1‑140 (MQ=255) cccTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTcg > 2:90607/1‑140 (MQ=255) ccTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGAGACCGTGCAGGTGCGGCGCCTGGGCGCCAGTTTTTcgc > 1:283906/1‑140 (MQ=255) ccTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTcgc > 2:160586/1‑140 (MQ=255) ccTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGAAACCGTGCCGGTCCGGCGCCTGGGCGCCAGTTTTTcgc > 1:319062/1‑140 (MQ=255) cTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTcgcg < 2:87269/140‑1 (MQ=255) cTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTcgcg < 1:90607/140‑1 (MQ=255) cTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTcgcg < 1:160586/140‑1 (MQ=255) gAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTa < 1:929632/140‑1 (MQ=255) gAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTa < 2:62608/140‑1 (MQ=255) gAAATCGAACGGCGGCAAAGGTTAGGTGGTCCCGACGGTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTa < 1:413994/140‑1 (MQ=255) gAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTACCCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAg < 1:717344/140‑1 (MQ=255) gAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAg < 2:71333/140‑1 (MQ=255) aCGGCGGTAAAGGTAACATGGCTCCGACGCTGTTGTTGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCg < 2:447074/140‑1 (MQ=255) cggcggTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCgg < 2:723996/140‑1 (MQ=255) cggcggTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTCAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCgg < 2:688801/140‑1 (MQ=255) gcggTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGgtg < 2:821395/140‑1 (MQ=255) gcggTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGgtg < 2:151655/140‑1 (MQ=255) aaGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCt > 2:946827/1‑140 (MQ=255) aCCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCg < 1:706740/140‑1 (MQ=255) cccGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTATCGCGTAGAGGTGCGGTGTGACGCAACCTTTTGGCGt > 1:327169/1‑140 (MQ=255) cccGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGAGCGCCAGTGTTTGGAGTAAAGGAGCGGTGTGGTGCAACCTTTTGGCGt > 2:469300/1‑140 (MQ=255) cGACGCTGTGGATGTTGACCGTGAACCTGCTTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTAc < 1:318438/140‑1 (MQ=255) gACGCTGTGGATATGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACt > 2:228754/1‑140 (MQ=255) cTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGAc < 1:212931/140‑1 (MQ=255) gtggatgtggaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCg < 1:923412/140‑1 (MQ=255) atgtggaCCGTTAACATGATTTATCAGGCTTTAGCGACTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCtat < 1:297031/140‑1 (MQ=255) tgtggaCCGTTAACCTGATTTATCTGACTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCtata < 2:906810/140‑1 (MQ=255) gaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCgg > 2:97228/1‑140 (MQ=255) gaCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCgg > 1:102719/1‑140 (MQ=255) aCCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGt > 2:101545/1‑140 (MQ=255) ccGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGAc > 1:138155/1‑127 (MQ=255) ccGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGAc < 2:138155/127‑1 (MQ=255) ccGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCg < 2:715710/129‑1 (MQ=255) ccGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCg > 1:715710/1‑129 (MQ=255) ccGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCACCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTa > 1:221247/1‑140 (MQ=255) gTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTaaa > 1:677649/1‑140 (MQ=255) ttAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTaaaa > 2:991968/1‑140 (MQ=255) ttAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTaaaa > 1:964643/1‑140 (MQ=255) cTGATTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTAtt > 1:60442/1‑140 (MQ=255) aTTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTc > 2:640623/1‑140 (MQ=255) aTTTATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTc > 1:541390/1‑140 (MQ=255) tATCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTcacc < 1:101545/140‑1 (MQ=255) aTCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACGCCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCACCCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTcacca < 2:694169/140‑1 (MQ=255) aTCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTcacca < 1:747610/140‑1 (MQ=255) tCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTcaccac > 1:903708/1‑140 (MQ=255) tCTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTcaccac > 2:897089/1‑140 (MQ=255) tCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTAGCGTACTTGACCGCAATATCGGTAAAACTATTTTcaccac > 1:403833/1‑140 (MQ=255) cTGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCaccacc < 2:879991/140‑1 (MQ=255) tGGCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCAccacca > 1:65931/1‑140 (MQ=255) ggCTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcat < 2:888475/140‑1 (MQ=255) ggCTTTAGCGATTGTTCTCAATCTTTGGGACACCGGGCCAGTCCGCCGGCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcat < 2:327169/140‑1 (MQ=255) cTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTca > 1:612187/1‑131 (MQ=255) cTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTca < 2:612187/131‑1 (MQ=255) cTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcatca > 2:568113/1‑140 (MQ=255) cTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcat < 1:198594/138‑1 (MQ=255) cTTTAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcat > 2:198594/1‑138 (MQ=255) tAGCGATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCatga < 1:117122/140‑1 (MQ=255) gATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGac < 2:44197/140‑1 (MQ=255) gATTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGac < 1:13019/140‑1 (MQ=255) aTTGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca < 2:804409/140‑1 (MQ=255) ttGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGacac > 1:183487/1‑140 (MQ=255) ttGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGacac > 1:154137/1‑140 (MQ=255) ttGTTCTCAATCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGacac > 1:958861/1‑140 (MQ=255) tGTTCTCAATCTTTGGGTCACCTTGCCGGTCCGCCGCCTCCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACt < 2:319062/140‑1 (MQ=255) | CAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACT > NC_000913/4487119‑4487385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |