BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	550,199	T→C	G191G (GGT→GGC)	ylbF →	DUF2877 domain‑containing protein YlbF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	550,199	0	T	C	100.0%	144.1 / NA	41	G191G (GGT→GGC)	ylbF	DUF2877 domain‑containing protein YlbF
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (21/20); total (21/20)

GGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCTCTGAGTTGCCCGA  >  NC_000913/550074‑550332

ggCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGc                                                                                                                         <  1:539823/140‑1 (MQ=255)

        gACCGACTGGCGGCACTTGCTGGGTAAAGGCCCCGCATTGACGCCGAGGCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCg                                                                                                                 <  2:335594/140‑1 (MQ=255)

         aCCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGa                                                                                                                >  1:888887/1‑140 (MQ=255)

             aCTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAAt                                                                                                            >  2:688695/1‑140 (MQ=255)

              cTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCTGGCCGTCCATTTTTTGCCTGTTCCGACAATc                                                                                                           >  2:376832/1‑140 (MQ=255)

                 gcggcACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGc                                                                                                        <  2:659767/140‑1 (MQ=255)

                 gcggcACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGc                                                                                                        <  1:875390/140‑1 (MQ=255)

                   ggcACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCaa                                                                                                      <  1:880903/140‑1 (MQ=255)

                   ggcACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCaa                                                                                                      <  1:600623/140‑1 (MQ=255)

                        tggctggGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGt                                                                                                 <  2:658614/140‑1 (MQ=255)

                              ggTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACcac                                                                                           >  2:792542/1‑140 (MQ=255)

                               gTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACcaca                                                                                          >  1:114889/1‑140 (MQ=255)

                                  aaGGCCCCGGATTAAAGCCGAGGCATGATGACACGCTTAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCg                                                                                       <  1:333418/140‑1 (MQ=255)

                                    ggCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCTTTTTTTGCCTGTTTCGAAGATCTGCAACTCGTTACCACAGCGGt                                                                                     >  1:636353/1‑140 (MQ=255)

                                        ccGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGc                                                                                 >  1:150531/1‑140 (MQ=255)

                                         cGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCg                                                                                >  2:1001076/1‑140 (MQ=255)

                                         cGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCg                                                                                >  1:851182/1‑140 (MQ=255)

                                            aTTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCa                                                                             <  2:560664/140‑1 (MQ=255)

                                                      aGTCATGATGACACGCTGAGTGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACg                                                                   >  1:988501/1‑140 (MQ=255)

                                                          atgatgACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTAt                                                               >  1:738756/1‑140 (MQ=255)

                                                                  acGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATg                                                              <  1:784815/133‑1 (MQ=255)

                                                                  acGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATg                                                              >  2:784815/1‑133 (MQ=255)

                                                                    gCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAg                                                     <  1:1001076/140‑1 (MQ=255)

                                                                    gCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAg                                                     >  2:711330/1‑140 (MQ=255)

                                                                      tGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGa                                                   >  2:739363/1‑140 (MQ=255)

                                                                              aTGCTGCTGGCGGCCTGGTATTATGGCGCATTAGATGGGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgc                                           <  1:376832/140‑1 (MQ=255)

                                                                                   gctgGCGGTCTGGTATGTTGGCGCTTTAGATGCGCCCTCTGGCCGTCCCTTTTTCGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgcctcgc                                      <  2:497109/140‑1 (MQ=255)

                                                                                   gctgGCGGACTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTtcgcctcgc                                      <  1:935275/140‑1 (MQ=255)

                                                                                     tgGCGGCCTGGTATTTTGGCGCTTTCGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCa                                    <  1:417717/140‑1 (MQ=255)

                                                                                     tgGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCa                                    <  1:531540/140‑1 (MQ=255)

                                                                                         ggcCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTCGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGACGCGCAAGGATATTTCGCCTCGCCACTcc                                >  1:497109/1‑140 (MQ=255)

                                                                                            cTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCTGTTATTTAGGTTGTGCTGCGCAAGGCTATTGCGCCTCGCCACTCCTGc                             >  2:284751/1‑140 (MQ=255)

                                                                                            cTGGTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGc                             >  2:84490/1‑140 (MQ=255)

                                                                                               gTATTATGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACt                          <  1:138318/140‑1 (MQ=255)

                                                                                                     tGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTAGGTTATGCCGCGCGAGGCTATTTCGCGTCGCAACTCCTGCACTTTGTTc                    >  2:259325/1‑140 (MQ=255)

                                                                                                     tGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc                    >  2:53202/1‑140 (MQ=255)

                                                                                                     tGGCGCTTTAGATGCGCGCTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTc                    <  2:988501/140‑1 (MQ=255)

                                                                                                                   cgcgcTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCTCTGAGTTGc      <  1:688695/140‑1 (MQ=255)

                                                                                                                     cgcTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCTCTGAGTTGccc    >  2:573294/1‑140 (MQ=255)

                                                                                                                       cTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCTCTGAGTTGCCCGa  >  1:916197/1‑140 (MQ=255)

                                                                                                                       cTCCGGCCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCTCTGAGTTGCCCGa  <  2:888887/140‑1 (MQ=255)

GGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCTCTGAGTTGCCCGA  >  NC_000913/550074‑550332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`