Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	637,019	T→C	Q200Q (CAA→CAG)	ybdO ←	putative LysR family DNA‑binding transcriptional regulator YbdO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	637,019	0	T	C	100.0%	321.4 / NA	90	Q200Q (CAA→CAG)	ybdO	putative LysR family DNA‑binding transcriptional regulator YbdO
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/49);  total (41/49)

CCAGTAAATCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAATTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGCTGATCACTGGCATTT  >  NC_000913/636886‑637155                                                                                                                                      |                                                                                                                                         ccAGTAAATCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTg                                                                                                                                    <  2:114953/140‑1 (MQ=255) ccAGTAAATCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTg                                                                                                                                    >  2:252257/1‑140 (MQ=255)   aGTAAATCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGaa                                                                                                                                  <  1:1000759/140‑1 (MQ=255)   aGTAAATCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGaa                                                                                                                                  >  2:876251/1‑140 (MQ=255)   aGTAAATCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGaa                                                                                                                                  >  2:749082/1‑140 (MQ=255)   aGTAAATCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGaa                                                                                                                                  <  2:502635/140‑1 (MQ=255)   aGTAAATCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGaa                                                                                                                                  <  1:835746/140‑1 (MQ=255)   aGTAAATCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGaa                                                                                                                                  >  1:769166/1‑140 (MQ=255)      aaaTCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAActc                                                                                                                               >  2:204410/1‑140 (MQ=255)        aTCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACtctt                                                                                                                             <  1:749082/140‑1 (MQ=255)        aTCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACtctt                                                                                                                             <  1:846123/140‑1 (MQ=255)        aTCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACtctt                                                                                                                             <  1:253204/140‑1 (MQ=255)        aTCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACtctt                                                                                                                             >  1:501819/1‑140 (MQ=255)        aTCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTGGAATATCAGCAAGCGCGTCTGATTTAGATAAAAACTGGGTGAACtctt                                                                                                                             >  2:467283/1‑140 (MQ=255)               aCTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCTTGCAGATTTAGATATTTACTGGGTGAACTCTTCTGCCAt                                                                                                                      >  2:441255/1‑140 (MQ=255)                  gCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAAt                                                                                                                   <  1:238016/140‑1 (MQ=255)                  gCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAAt                                                                                                                   <  1:859056/140‑1 (MQ=255)                   cAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAAtt                                                                                                                  >  1:637003/1‑140 (MQ=255)                   cAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAAtt                                                                                                                  >  1:36438/1‑140 (MQ=255)                     aTGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTg                                                                                                                >  2:163186/1‑140 (MQ=255)                       cagaTTAATGATTGTCGGCAAAGAGGAACCAAGAACTGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGtt                                                                                                              <  2:482848/137‑1 (MQ=255)                          aTTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCAt                                                                                                           <  1:522104/140‑1 (MQ=255)                            tAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATaa                                                                                                         <  1:987492/140‑1 (MQ=255)                                 aTTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCt                                                                                                    <  2:919909/140‑1 (MQ=255)                                  ttGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTTGGTGAACTCTTCTGCCATAATTTGTTGATAAGTGCTa                                                                                                   >  1:494228/1‑140 (MQ=255)                                  ttGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTa                                                                                                   >  1:599088/1‑140 (MQ=255)                                  ttGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTAGGTGAACGCTTATGGCATAATGTGTTCATAAGTGCTa                                                                                                   >  1:271347/1‑140 (MQ=255)                                   tGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTAt                                                                                                  >  2:214193/1‑140 (MQ=255)                                   tGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTAt                                                                                                  >  2:535658/1‑140 (MQ=255)                                   tGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAAATATTAACTGGGGGAAGTCTTCTGCCATAATTTGTTCATAAGTGCTAt                                                                                                  >  2:411375/1‑140 (MQ=255)                                    gTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTAtt                                                                                                 <  2:235716/140‑1 (MQ=255)                                     tCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCt                                                                                                    >  1:1010712/1‑136 (MQ=255)                                     tCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTg                                                                                                >  1:224937/1‑140 (MQ=255)                                     tCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGACATAATTTGATCATAAGTGCTACTg                                                                                                >  1:482848/1‑140 (MQ=255)                                     tCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGAATTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCt                                                                                                    <  2:1010712/136‑1 (MQ=255)                                             gagGAACCACGAAATGAGATTTTGCCATTTATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAAt                                                                                        <  1:465338/140‑1 (MQ=255)                                                 aaCCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGt                                                                                    <  1:252257/140‑1 (MQ=255)                                                   ccACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTgg                                                                                  >  2:909475/1‑140 (MQ=255)                                                   ccACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTgg                                                                                  <  2:224937/140‑1 (MQ=255)                                                   ccACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATCTGTTCATAAGTGCTATTGTCAGTAATTCGTgg                                                                                  <  2:769166/140‑1 (MQ=255)                                                   ccACGAAATGAGATTTTGCGATTCATAAACCTCTCGTGTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTgg                                                                                  <  1:338479/140‑1 (MQ=255)                                                   ccACGAAATGAGATTCTGCGATCCACAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTgg                                                                                  <  1:302987/140‑1 (MQ=255)                                                      cGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATg                                                                               <  1:721155/140‑1 (MQ=255)                                                           tGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTAt                                                                          <  2:637003/140‑1 (MQ=255)                                                               aTTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATtact                                                                      <  2:972405/140‑1 (MQ=255)                                                               aTTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATtact                                                                      <  2:36438/140‑1 (MQ=255)                                                                ttttGCGATTCATAACTCTCTCATCGATTCCCATTTGTATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATtacta                                                                     <  1:467283/140‑1 (MQ=255)                                                                ttttGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATtacta                                                                     <  1:959854/140‑1 (MQ=255)                                                                  ttGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACa                                                                   <  1:607944/140‑1 (MQ=255)                                                                         tCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTaga                                                            <  2:714262/140‑1 (MQ=255)                                                                           aTAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGt                                                          <  1:909475/140‑1 (MQ=255)                                                                                tctctcGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGc                                                     <  1:890855/140‑1 (MQ=255)                                                                                   ctcGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGaa                                                  <  1:163186/140‑1 (MQ=255)                                                                                   ctcGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGAGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGaa                                                  <  2:783066/140‑1 (MQ=255)                                                                                    tcGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTaga                                                            <  1:506411/129‑1 (MQ=255)                                                                                    tcGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTaga                                                            >  2:506411/1‑129 (MQ=255)                                                                                     cGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATc                                                <  1:214193/140‑1 (MQ=255)                                                                                     cGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATc                                                >  1:232753/1‑140 (MQ=255)                                                                                     cGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATc                                                >  2:899056/1‑140 (MQ=255)                                                                                           tttCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGc                                          >  1:230643/1‑140 (MQ=255)                                                                                             tCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCATATTACTTCAAATTAGAGTATTGCGAATCGTATGCaa                                        >  1:318777/1‑140 (MQ=255)                                                                                               cATTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATg                                      <  1:535658/140‑1 (MQ=255)                                                                                                aTTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATgg                                     >  2:730132/1‑140 (MQ=255)                                                                                                aTTTGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCATGGATGCCTATTACTAGAAATTAGACTATTGCGAATCGTATGCAATgg                                     >  2:263344/1‑140 (MQ=255)                                                                                                   tGAATATCATCAACCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCAt                                  <  1:204410/140‑1 (MQ=255)                                                                                                               aCCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAAt                            <  2:897675/134‑1 (MQ=255)                                                                                                               aCCCCTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAAt                            >  1:897675/1‑134 (MQ=255)                                                                                                                ccccTGCTGATTTAGCTATTAACTGCGTGCACTCTTCAGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGaa                     <  1:298503/140‑1 (MQ=255)                                                                                                                ccccTGCTGATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGaa                     <  1:876251/140‑1 (MQ=255)                                                                                                                ccccTGCTAATTTAGAGATTAACTGGGTGAAGTATACTGGCATAATTTATTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGaa                     <  2:494228/140‑1 (MQ=255)                                                                                                                   ctgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGaa                     >  1:693077/1‑137 (MQ=255)                                                                                                                   ctgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGaa                     <  2:693077/137‑1 (MQ=255)                                                                                                                   ctgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATGGCGAATCGTATACAATGGCATTCAAATGACGGAACgg                  >  1:389923/1‑140 (MQ=255)                                                                                                                    tgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGTATGCAAATGACGGaa                     >  2:730255/1‑136 (MQ=255)                                                                                                                    tgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGaa                     <  1:146541/136‑1 (MQ=255)                                                                                                                    tgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGaa                     >  2:146541/1‑136 (MQ=255)                                                                                                                    tgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGc                 >  1:535775/1‑140 (MQ=255)                                                                                                                    tgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGc                 >  1:119251/1‑140 (MQ=255)                                                                                                                    tgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGc                 >  1:698679/1‑140 (MQ=255)                                                                                                                    tgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGc                 >  2:835502/1‑140 (MQ=255)                                                                                                                    tgctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGAATGTAACGGCATGTAAATGACGGAACGGc                 >  1:476414/1‑140 (MQ=255)                                                                                                                    tgctgATTTAGATATTAACGGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGaa                     <  1:730255/136‑1 (MQ=255)                                                                                                                     gctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGAGAATCGTGTGCAATAGCATGCCAATGACGGAACGGCt                >  1:368970/1‑140 (MQ=255)                                                                                                                      ctgATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCCAATCGTATGCAATGCCATGCATATGACGGAACGGCTg               >  1:325438/1‑140 (MQ=255)                                                                                                                        gATTTAGATATTAACTGGGTGATCTCTTCCGCCATAACTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGCTGAt             <  1:263344/140‑1 (MQ=255)                                                                                                                        gATTTAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGCTGAt             >  1:557832/1‑140 (MQ=255)                                                                                                                           ttAGATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGCTGATCAc          <  2:935204/140‑1 (MQ=255)                                                                                                                           ttAGATATTAACTGGGTGAACTCTTCTGCAATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTATTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGCTGATCAc          <  1:441255/140‑1 (MQ=255)                                                                                                                             aGATATTAACTGGGTGATCTCTACTGCCATATTTTCTTCTTAAGTGCTCTTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGCTGATCACTg        <  2:271347/140‑1 (MQ=255)                                                                                                                              gATATTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGCTGATCACTgg       <  1:730132/140‑1 (MQ=255)                                                                                                                               atatTAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGCTGATCACTGGc      >  2:248797/1‑140 (MQ=255)                                                                                                                                   tAACTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGCTGATCACTGGCAttt  <  2:232753/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                         CCAGTAAATCTGTAACTGCAATGCTATTAATGATTGTCAGCAAAGAGGAACCACGAAATGAGATTTTGCGATTCATAAATCTCTCGTCTATTTCCATTTGAATATCATCAACCCCTGCTGATTTAGATATTAATTGGGTGAACTCTTCTGCCATAATTTGTTCATAAGTGCTATTGTCAGTAATTCGTGGATGCCTATTACTACAAATTAGAGTATTGCGAATCGTATGCAATGGCATGCAAATGACGGAACGGCTGATCACTGGCATTT  >  NC_000913/636886‑637155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑