Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 640,119 A→G T123A (ACC→GCC)  ahpF → alkyl hydroperoxide reductase, AhpF component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913640,1190AG97.0% 225.6 / ‑3.0 67T123A (ACC→GCC) ahpFalkyl hydroperoxide reductase, AhpF component
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (24/41);  total (25/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01

TTTTGCAGGCTCCCCGCTGGGCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAACCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCACCTTCCAGAACGAAATCACCGATCGCA  >  NC_000913/639983‑640251
                                                                                                                                        |                                                                                                                                    
ttttGCAGGCTCCCCGCTGGGCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCt                                                                                                                                   <  1:42614/140‑1 (MQ=255)
  ttGCAGGCTCCCCGCTGGGCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGTTGATTTCGAATTCGAAGCCTAt                                                                                                                                 >  1:337488/1‑140 (MQ=255)
  ttGCAGGCTCCCCGCTGGGCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTAt                                                                                                                                 <  2:223631/140‑1 (MQ=255)
  ttGCAGGCTCCCCGCTGGGCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTAt                                                                                                                                 >  2:244765/1‑140 (MQ=255)
        gCTCCCCGCTGGGCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAACCt                                                                                                                                   <  1:5776/132‑1 (MQ=255)
        gCTCCCCGCTGGGCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAACCt                                                                                                                                   >  2:5776/1‑132 (MQ=255)
              cGCTGGGCCACGAGTTCACCTCTCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGctctct                                                                                                                     <  2:510963/140‑1 (MQ=255)
                    gCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCcac                                                                                                               <  1:134340/140‑1 (MQ=255)
                    gCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCcac                                                                                                               <  1:852731/140‑1 (MQ=255)
                           gTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGcc                                                                                                        <  2:625986/140‑1 (MQ=255)
                           gTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGcc                                                                                                        <  2:537196/140‑1 (MQ=255)
                            ttCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGccc                                                                                                       <  2:916549/140‑1 (MQ=255)
                             tCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAAc                                                                                                            <  2:835566/134‑1 (MQ=255)
                             tCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAAc                                                                                                            >  1:835566/1‑134 (MQ=255)
                             tCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCg                                                                                                      >  1:173805/1‑140 (MQ=255)
                               aCCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGa                                                                                                    <  1:870306/140‑1 (MQ=255)
                               aCCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATAGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGa                                                                                                    <  2:848148/140‑1 (MQ=255)
                                   cGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACgtg                                                                                                >  2:561676/1‑140 (MQ=255)
                                    gCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACgtgg                                                                                               >  2:23379/1‑140 (MQ=255)
                                     cTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGCGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACgtggt                                                                                              >  2:816098/1‑140 (MQ=255)
                                       ggTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGc                                                                                            <  1:23379/140‑1 (MQ=255)
                                        gTACTGGCGTTGCTGCGGACCGTTGGTCATCCGTCGATAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCa                                                                                           <  1:316268/140‑1 (MQ=255)
                                           cTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTGCTCACTCCCTTGCCACTACTGCCCGGACGTGGTGCAGgc                                                                                        >  2:409346/1‑140 (MQ=255)
                                             ggCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGgcgc                                                                                      <  2:997320/140‑1 (MQ=255)
                                             ggCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGgcgc                                                                                      >  1:158173/1‑140 (MQ=255)
                                              gCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCt                                                                                     >  1:32332/1‑140 (MQ=255)
                                              gCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGATCTCTTGACACGACAGCCCGGACGTGGTGCAGGCGCt                                                                                     >  1:306954/1‑140 (MQ=255)
                                               cGTTGCTGTGGACCGGTGGTCACCCGTCGAATGAACCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTg                                                                                    <  2:337488/140‑1 (MQ=255)
                                                gTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGATCTCTTGTCACAACTGCCCGGACGTGGTGCAGGCGCTGa                                                                                   >  2:392806/1‑140 (MQ=255)
                                                 ttGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGaa                                                                                  <  2:173805/140‑1 (MQ=255)
                                                   gCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATAACTCGCTCGCTTGCCAAAACTGCCCAGACGTGGTGCAGGCGCTGAAcc                                                                                >  2:314637/1‑140 (MQ=255)
                                                       tgGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCtgat                                                                            <  2:966607/140‑1 (MQ=255)
                                                         gACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCtgatga                                                                          <  1:49416/140‑1 (MQ=255)
                                                          aCCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAg                                                                         <  1:719364/140‑1 (MQ=255)
                                                          aCCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAg                                                                         <  1:869735/140‑1 (MQ=255)
                                                          aCCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAg                                                                         <  1:878244/140‑1 (MQ=255)
                                                              gtggtCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTa                                                                     >  1:565584/1‑140 (MQ=255)
                                                              gtggtCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTa                                                                     >  1:234081/1‑140 (MQ=255)
                                                                        gTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCcgc                                                           <  2:910492/140‑1 (MQ=255)
                                                                        gTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCcgc                                                           <  1:948977/140‑1 (MQ=255)
                                                                         tCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCcgcg                                                          >  1:783744/1‑140 (MQ=255)
                                                                          cGAAAGAAGCGCAGTCTATGCTCGAGCAGATTCGCAATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGTCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCgcgc                                                         <  2:434912/140‑1 (MQ=255)
                                                                           gAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGTTGCAGGCACTGAACCTCATGACCGTACTGAACCCGCGCa                                                        >  2:394426/1‑140 (MQ=255)
                                                                             aagaagCGCAGTCTCAGCTGGATCACATTTGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATc                                                      <  1:294477/140‑1 (MQ=255)
                                                                                gagacaggTCTCTGCTGGAGCATATTCGCTATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAg                                                   <  1:322095/133‑1 (MQ=255)
                                                                                aagCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAg                                                   <  1:51722/140‑1 (MQ=255)
                                                                                aagCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAg                                                   <  2:234081/140‑1 (MQ=255)
                                                                                aagCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAg                                                   <  1:935718/140‑1 (MQ=255)
                                                                                  gcgcAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGca                                                 <  2:138936/140‑1 (MQ=255)
                                                                                  gcgcAGTCTCTGCTGAAGCAGAGTCCCCATATTGACGCTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGca                                                 <  1:342153/140‑1 (MQ=255)
                                                                                  gcgcAGTCGCTGCTGGTCCAGAATCGCCATATTGACGGTCATTTTGAAATCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGca                                                 <  2:458479/140‑1 (MQ=255)
                                                                                    gcAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGcaca                                               <  2:708781/140‑1 (MQ=255)
                                                                                    gcAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGcaca                                               >  2:676043/1‑140 (MQ=255)
                                                                                    gcAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGcaca                                               <  2:666583/140‑1 (MQ=255)
                                                                                    gcAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGcaca                                               <  2:833582/140‑1 (MQ=255)
                                                                                                  aGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAAGCTGATGAGAGTATTGATCCCGCGCATCAAGCACACTGCAAtctgtctc                                 >  2:322095/1‑133 (MQ=255)
                                                                                                  aGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGAcggc                                 >  2:909260/1‑140 (MQ=255)
                                                                                                    cAGATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGAcggcgg                               >  1:1011680/1‑140 (MQ=255)
                                                                                                      gATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCa                             <  1:244765/140‑1 (MQ=255)
                                                                                                      gATTCGCCATATTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCa                             >  1:926768/1‑140 (MQ=255)
                                                                                                              atatTGACGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCACCTTCCAg                     <  1:676043/140‑1 (MQ=255)
                                                                                                                   gACGGTGATTTTGAATTCGAAGCCTATTATTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCACCTTCCAGAACGa                <  1:392806/140‑1 (MQ=255)
                                                                                                                     cGGTGATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCACCTTCCAGAACGaaa              <  1:561676/140‑1 (MQ=255)
                                                                                                                      ggTGATTTTGAAATCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCAGCGCATCAAGCATACTGCAATTGACTGCGGCACCTTCCAGAACGAAAt             >  2:336094/1‑140 (MQ=255)
                                                                                                                         gATTTTGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCACCTTCCAGAACGAAATCAc          <  1:909260/140‑1 (MQ=255)
                                                                                                                            tttGAATTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCACCTTCCAGAACGAAATCACCGa       >  1:74415/1‑140 (MQ=255)
                                                                                                                                 aTTCGAAGCCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAGCCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCACCTTCCAGAACGAAATCACCGATCGCa  <  1:827128/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                    
TTTTGCAGGCTCCCCGCTGGGCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAACCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCACCTTCCAGAACGAAATCACCGATCGCA  >  NC_000913/639983‑640251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: