Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 645,711 | C→T | L290L (CTG→CTA) | citT ← | citrate:succinate antiporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 645,711 | 0 | C | T | 93.7% | 189.2 / 3.1 | 64 | L290L (CTG→CTA) | citT | citrate:succinate antiporter |
Reads supporting (aligned to +/- strand): ref base C (2/2); new base T (29/30); total (32/32) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.17e-01 |
GGTAATGTCTTTCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATA > NC_000913/645582‑645846 | ggTAATGTCTTTCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAGTACAAGGCCAATTAGTGTCCAct > 2:673507/1‑140 (MQ=255) ggTAATGTCTTTCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCAct > 2:175784/1‑140 (MQ=255) tAATGTCTTTCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCActct > 1:993381/1‑140 (MQ=255) tAATGTCTTTCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCActct > 1:653522/1‑140 (MQ=255) tAATGTCTTTCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCActct > 2:664245/1‑140 (MQ=255) tAATGTCTTTCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCActct > 1:576188/1‑140 (MQ=255) tAATGTCTTTCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCActct > 1:540227/1‑140 (MQ=255) tAATGTCTTTCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCActcc > 2:998702/1‑139 (MQ=255) ttCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCgtgt < 2:993381/140‑1 (MQ=255) tCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTc > 1:912510/1‑140 (MQ=255) ggCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAgcgc > 1:946072/1‑140 (MQ=255) ggCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAgcgc < 1:536636/140‑1 (MQ=255) aaCGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCa > 2:585813/1‑140 (MQ=255) aaCGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCa > 1:750906/1‑140 (MQ=255) cGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATg < 2:847299/140‑1 (MQ=255) cGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATg < 2:875395/140‑1 (MQ=255) cAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATAAGTGTCCTCTCCCTACGTGTCGGCGCACCCATGGttt > 1:451027/1‑140 (MQ=255) aGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGtttt < 2:750906/140‑1 (MQ=255) cATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGTGCACCCATGGTTTTCAGTtcat > 2:246060/1‑140 (MQ=255) aTTAGCGAAACTGCCCGCAGACCAACCGCAGTAGCATCAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTtcatc < 1:497278/140‑1 (MQ=255) ttAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTtcatca < 2:912510/140‑1 (MQ=255) gCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCAccc > 2:172010/1‑140 (MQ=255) aaaCTGCCAGCAGACCAACCGCTGTAGCATTTATGCCTTGACTGCCAATTACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGcc < 2:375717/140‑1 (MQ=255) agcagACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGc < 2:832557/140‑1 (MQ=255) cagACCAACCGCAGTCGCATTACTGTCTTTACTGCCACATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCa < 1:310670/140‑1 (MQ=255) cagACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGTGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCa < 1:246060/140‑1 (MQ=255) cagACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCa < 1:175784/140‑1 (MQ=255) cagACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCa < 1:157739/140‑1 (MQ=255) aaCCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCActtctt > 2:200658/1‑140 (MQ=255) aCCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGtt < 2:955067/129‑1 (MQ=255) aCCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGtt > 1:955067/1‑129 (MQ=255) ccGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCa < 2:576188/140‑1 (MQ=255) ccGCAGTAGCATTAACGACTTCACTGCCAAATACCCAGAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCa < 1:357330/140‑1 (MQ=255) gCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGGACCCATGGGTTTCAGTACATCACCCTCCCAGGTTGCCACTTCTTCACt > 2:357330/1‑140 (MQ=255) gCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCATCCGCCCAGGTTGCCACTTCTTCACt < 1:227655/140‑1 (MQ=255) cAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACtg < 1:998702/140‑1 (MQ=255) gCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACtgtgtgt < 1:528029/140‑1 (MQ=255) cATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACtgtgtgtg > 2:799711/1‑140 (MQ=255) ttAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGAt > 1:92565/1‑140 (MQ=255) aaTGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGAttt < 1:381479/140‑1 (MQ=255) gACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCg > 2:1013555/1‑140 (MQ=255) gACTTCACTGCCAAAAACCCACTAACCTAGGCTGAGCTATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCg < 1:356725/140‑1 (MQ=255) ttCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGtt > 1:970761/1‑140 (MQ=255) ttCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGACACATCCTCACTGTGTGTGATTTCCGGtt > 1:418568/1‑140 (MQ=255) cTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTa < 2:2722/140‑1 (MQ=255) gCCAAATACCCACAAGCTTAAGTTGAGCAATGCAAGGCCCATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACa < 2:308738/140‑1 (MQ=255) gCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACa < 1:1013555/140‑1 (MQ=255) aaaTACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCTACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCa < 2:621252/140‑1 (MQ=255) aaaTACCCACAAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCa < 1:799711/140‑1 (MQ=255) acaAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGaa > 1:621009/1‑140 (MQ=255) acaAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGaa > 1:905829/1‑140 (MQ=255) acaAACCTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTATGATTTCCGGTTTCTACAGCACGTAGGaa > 1:393734/1‑140 (MQ=255) ccTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCa > 1:788052/1‑140 (MQ=255) ccTAAGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCa < 1:587404/140‑1 (MQ=255) aaGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACgg > 1:946937/1‑140 (MQ=255) aaGCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACgg > 1:665494/1‑140 (MQ=255) gCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGgcg < 1:587259/140‑1 (MQ=255) gCTGAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGgcg < 2:653522/140‑1 (MQ=255) gAGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCaa < 1:540000/140‑1 (MQ=255) aGCAATACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAAt > 2:885066/1‑140 (MQ=255) gCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATg > 2:770617/1‑140 (MQ=255) aTACAAGGCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATa < 2:621009/140‑1 (MQ=255) aCAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAg < 1:770617/140‑1 (MQ=255) gCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGa < 2:699905/140‑1 (MQ=255) gCCAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCGTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGTAAGCCACGGCGCAATGATAAGCAAGa < 2:905829/140‑1 (MQ=255) cAATTAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATa > 1:1009170/1‑140 (MQ=255) | GGTAATGTCTTTCCAAGGCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATA > NC_000913/645582‑645846 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |