Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 921,427 A→G N361D (AAC→GAC)  macB → ABC‑type tripartite efflux pump ATP binding/membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913921,4270AG100.0% 128.2 / NA 38N361D (AAC→GAC) macBABC‑type tripartite efflux pump ATP binding/membrane subunit
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (12/26);  total (12/26)

TCCCGGGAAAGATTTTGGCGATGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATAACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAACACCTTTAATCAGGAGCAGCTGAACGGTCGTGCGCAGGTCGTGGTTCTCGA  >  NC_000913/921291‑921560
                                                                                                                                        |                                                                                                                                     
tCCCGGGAAAGATTTTGGCTATGACGATCCGCAATATCAGCAGGCGCGGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACa                                                                                                                                    >  2:652315/1‑140 (MQ=255)
   cGGGAAAGATTTTGGCGATGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAatg                                                                                                                                 >  1:992362/1‑140 (MQ=255)
     ggAAAGATTTTGGCGATGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAatgtt                                                                                                                               >  1:162083/1‑140 (MQ=255)
     ggAAAGATTTTGGCGATGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAatgtt                                                                                                                               >  1:59208/1‑140 (MQ=255)
     ggAAAGATTTTGGCGATGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAatgat                                                                                                                               >  2:900268/1‑138 (MQ=255)
      gAAAGATTTTGGCGATGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAatgttg                                                                                                                              >  2:901907/1‑140 (MQ=255)
                 gCGATGACGATCCGCAATATCACCAAGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGcc                                                                                                                   <  1:405216/140‑1 (MQ=255)
                   gATGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAg                                                                                                                 <  1:34287/140‑1 (MQ=255)
                     tGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTg                                                                                                               >  1:188156/1‑140 (MQ=255)
                       aCGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGcc                                                                                                             <  1:694402/140‑1 (MQ=255)
                        cGATCCGCAATATCAACAGGCGTTGTAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCa                                                                                                            <  1:366324/140‑1 (MQ=255)
                                     cagcagGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAgcgg                                                                                               <  1:610623/140‑1 (MQ=255)
                                        cagGCGCTGAAGTACGAGGACTCAATCGCCATCAATAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGa                                                                                            <  2:455116/140‑1 (MQ=255)
                                        cagGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGa                                                                                            <  1:652315/140‑1 (MQ=255)
                                        cagGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGa                                                                                            <  1:900989/140‑1 (MQ=255)
                                        cagGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGa                                                                                            <  2:188156/140‑1 (MQ=255)
                                        cagGCGCTGAAGTACCACGACTTAATCGCTATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGa                                                                                            <  1:459251/140‑1 (MQ=255)
                                         agGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGat                                                                                           <  2:162083/140‑1 (MQ=255)
                                          ggCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGatt                                                                                          >  1:73067/1‑140 (MQ=255)
                                           gcgcTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGatta                                                                                         <  1:846811/140‑1 (MQ=255)
                                                gAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTa                                                                                    <  1:718628/140‑1 (MQ=255)
                                                gAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTa                                                                                    <  2:152773/140‑1 (MQ=255)
                                                      cgacgaCTTAATCGCCATCCAAAAACAACCGAGGGCCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGCCAATGTTGATGTTGCTACCAGTGCCAATGGCGTGAGCGGCGGTTATTTTAATgctt                                                                              >  2:900989/1‑137 (MQ=255)
                                                           acTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGc                                                                         <  2:99632/140‑1 (MQ=255)
                                                                   gCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCtt                                                                 <  2:73067/140‑1 (MQ=255)
                                                                     cATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCa                                                               >  1:186497/1‑140 (MQ=255)
                                                                              acaacCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGaa                                                      <  1:458715/140‑1 (MQ=255)
                                                                                aacCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAac                                                    <  1:873173/140‑1 (MQ=255)
                                                                                aacCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAac                                                    <  1:212377/140‑1 (MQ=255)
                                                                                  ccGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAacac                                                  <  2:579743/140‑1 (MQ=255)
                                                                                  ccGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAacac                                                  >  2:870140/1‑140 (MQ=255)
                                                                                            ccTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGACGATTATTTTAATGTCTGTGGCATGGCCTGCAATGAAGGTAACACCTTTAATCAg                                        >  1:290455/1‑140 (MQ=255)
                                                                                               cAGCCACACCTGCCGTCTCGCATAACCTGCGTCTGGGTTGTGACAATGCTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAACACCTTTAATCAGGag                                     <  2:443249/140‑1 (MQ=255)
                                                                                                       ccTGCCGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAACACCTTTAATCAGGAGCAGCTGaa                             <  2:186497/140‑1 (MQ=255)
                                                                                                            cGTCTCGCAAAACCTGCGCCTGCGTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGGGAAGGAAACACATTTAATCAGGAGCAGCTGAACGGTc                        >  1:449488/1‑140 (MQ=255)
                                                                                                                        cctgcgcctgcgTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAACACCTTTAATCAGGAGCAGCTGAACGGTCGTGCGCAGGTCg            <  1:900268/140‑1 (MQ=255)
                                                                                                                             gcctgcgTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAACACCTTTAATCAGGAGCAGCTGAACGGTCGTGCGCAGGTCGTGGtt       <  1:870140/140‑1 (MQ=255)
                                                                                                                                tgcgTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAACACCTTTAATCAGGAGCAGCTGAACGGTCGTGCGCAGGTCGTGGTtctc    <  1:901907/140‑1 (MQ=255)
                                                                                                                                  cgTTATGACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAACACCTTTAATCAGGAGCAGCTGAACGGTCGTGCGCAGGTCGTGGTTCTCGa  <  1:85233/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                     
TCCCGGGAAAGATTTTGGCGATGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATAACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAACACCTTTAATCAGGAGCAGCTGAACGGTCGTGCGCAGGTCGTGGTTCTCGA  >  NC_000913/921291‑921560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: