| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 279,941 | Δ1 bp | intergenic (‑66/+444) | insA‑2 ← / ← yagB | IS1 protein InsA/orphan antitoxin YagB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 279,939 | 0 | A | . | 99.2% | 934.4 / 2.5 | 244 | intergenic (‑64/+446) | insA‑2/yagB | IS1 protein InsA/orphan antitoxin YagB |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base . (107/134); total (109/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 254 total aligned reads displayed.
CGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAA > NC_000913/279800‑280067 | cGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAcaca < 2:630345/140‑1 (MQ=35) aGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAAcacagtgg < 1:185795/140‑5 (MQ=25) gTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCTGTCAGTTGGCAGCATTACCGAGAAAACaatggg > 2:1213507/1‑136 (MQ=11) tGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGc > 1:567650/1‑140 (MQ=37) tACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGt > 1:2092678/1‑140 (MQ=255) gCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACt < 1:1346690/140‑1 (MQ=255) ccccGTCAGTAGCTGAACAGGAGGGACAGTTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTa < 2:1315800/140‑1 (MQ=255) cGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGGAGCATCACGGAGCAGA‑AAATGGGCTGATTCGGCAGTACTGTCCTaaaa > 2:1106402/1‑140 (MQ=14) cGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTaaaa > 2:1279120/1‑140 (MQ=255) cGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTaaaa > 2:2120487/1‑140 (MQ=255) tCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAg > 2:1299069/1‑140 (MQ=255) cAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGATAACTCAAA‑GGGCTAATACGGCAGTACTTTCCTAAAAAGa > 2:929101/1‑140 (MQ=17) aGTAGCTGAACAGGATGGACAGCTGCTAGAAACAGAACCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAc < 1:1140234/140‑1 (MQ=18) aGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAc < 1:305406/140‑1 (MQ=255) gTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACa > 2:1682868/1‑140 (MQ=255) gTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACa > 1:1789203/1‑140 (MQ=255) tAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACAt > 2:163001/1‑140 (MQ=255) cTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTc < 1:1563044/140‑1 (MQ=255) cTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTc < 2:2105049/140‑1 (MQ=255) cTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTc < 1:366345/140‑1 (MQ=255) cTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTc < 1:2228050/140‑1 (MQ=255) cTGAACAGGAGGGACAGATGATAGAAACAGAAGCCTCTGGAGCACCTCCAAAACACCACCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTc < 2:894241/140‑1 (MQ=18) gAACAGGAGGGACAGTTGATAGAAATAGACGCCACTGCAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCtt < 1:1001870/140‑1 (MQ=21) gAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCtt < 2:299809/140‑1 (MQ=255) gAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCtt < 1:1279120/140‑1 (MQ=255) gAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCtt < 2:80649/140‑1 (MQ=255) aaCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCtt > 2:2492449/1‑139 (MQ=255) aaCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCtt < 1:2492449/139‑1 (MQ=255) aCAGGAGGGACAGCTGATAGAAGCAGAAGCCCCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTAGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc < 2:1042091/140‑1 (MQ=21) aCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc < 1:2168516/140‑1 (MQ=255) aCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc < 1:1682868/140‑1 (MQ=255) aCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc < 1:592028/140‑1 (MQ=255) aCAGGAGGGACAGCTCATAGAAACAAAAGACACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc < 1:1120217/140‑1 (MQ=21) ggaggGACAGCTGATCGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCa < 1:1046900/140‑1 (MQ=255) ggaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAc > 2:502219/1‑128 (MQ=255) aggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAat < 2:1819509/140‑1 (MQ=255) aggGACAGCTGATAGAAACAGAAACCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAat < 1:2429883/140‑1 (MQ=255) gggACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAata > 1:1286350/1‑140 (MQ=255) ggACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAatat > 1:501651/1‑140 (MQ=255) aCAGCTGATAGAAACGGAAGCCTCTGGAGTACCTCAACAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATAc < 1:1213507/140‑1 (MQ=25) aCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATAc > 2:419899/1‑140 (MQ=255) aCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCAGCATTACTTTCCTAAAGAGACGTGTCTTGCCCAATATAc > 2:857307/1‑140 (MQ=18) cAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACt < 2:2054055/140‑1 (MQ=255) cAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACt < 1:2236638/140‑1 (MQ=255) aGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTc > 1:2045764/1‑140 (MQ=255) tGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACTCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAAc < 1:80795/140‑1 (MQ=255) gATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa < 2:178987/140‑1 (MQ=255) gATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTAAACa < 2:1232514/140‑1 (MQ=255) gATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGACAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa < 2:1908544/140‑1 (MQ=255) aTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACAt < 1:510827/140‑1 (MQ=255) tAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATg < 1:447790/140‑1 (MQ=255) aGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGa < 2:2033814/140‑1 (MQ=255) aGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCCGCAGTACTTTCCGAAAAAGACATGTCTTGCACAATATACTCAACATGa > 2:773638/1‑140 (MQ=25) gAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGaa < 1:1458993/140‑1 (MQ=255) gAAACAGAAGCCACTCGAGCACCTCCAAAGCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGaa < 1:714371/140‑1 (MQ=25) aaaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAAc < 1:1400903/140‑1 (MQ=255) aCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGACCAATATACTCAACATGAACTa > 1:913022/1‑140 (MQ=255) cAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa > 2:1420080/1‑132 (MQ=255) cAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa < 1:1420080/132‑1 (MQ=255) cAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAg > 1:2297946/1‑140 (MQ=255) aaGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTTGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACt < 1:2066037/124‑1 (MQ=255) aaGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAAc > 2:1375684/1‑128 (MQ=255) aaGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAAc < 1:1375684/128‑1 (MQ=255) aaGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGAt > 2:1607381/1‑139 (MQ=255) aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCt < 2:2197858/136‑1 (MQ=255) tGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTtgc > 2:2336724/1‑140 (MQ=255) ggAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCGTGCCCAAGATACTCTACATGACCTAGATCTGGTtgct > 1:874119/1‑140 (MQ=25) gAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTtgctg < 2:494632/140‑1 (MQ=255) gAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTtgctg < 1:86253/140‑1 (MQ=255) gAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTtgctg < 1:419899/140‑1 (MQ=255) gAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTtgctg < 1:1627923/140‑1 (MQ=255) gCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTgctgct < 2:73726/140‑1 (MQ=255) cACCTCAACAACACCATGATACTCTAAATCGAAGAGTTGGCAGCATCAGCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTc < 2:1200705/140‑1 (MQ=17) cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCGCAATATAGTCAGCAGGAACTACATCTGGTTGCTGCTc > 1:631230/1‑140 (MQ=21) cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTc < 1:165059/140‑1 (MQ=255) cAAAAACCCCATCATACTCTAAGTCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAATACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTa < 2:880638/140‑1 (MQ=18) cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTa > 2:2380489/1‑140 (MQ=255) acacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAaacaa > 2:1457020/1‑140 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAaacaa < 2:2459525/137‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAGTATACTCACCATGAACGAGATCTGGATGCTTCTCAGCTAAACAACAGa > 2:1052878/1‑140 (MQ=18) tACACTAAATCAGTACGTTGGCAGCTTCACCGAGAACTC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCgag < 1:773638/140‑1 (MQ=17) tACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCgag < 1:1229947/140‑1 (MQ=255) cacTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGaa > 2:2265726/1‑140 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGaaa < 2:335028/140‑1 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAATATGAACTACATCAGTTCGCTGCTCACCTAAACAACAGACCGAGAAAGa > 2:1134821/1‑140 (MQ=17) tAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGa > 1:2345310/1‑140 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGa < 2:1733667/140‑1 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGa > 1:1775119/1‑140 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGa > 1:1913502/1‑140 (MQ=255) aaTCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGaca > 2:2073530/1‑140 (MQ=255) aaTCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGaca > 1:461902/1‑140 (MQ=255) aTCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAaacaa < 2:591603/123‑1 (MQ=255) aTCAGTAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGacac > 2:1918814/1‑140 (MQ=255) cAGTAAGTTGGCAGCGTCACCGTGATCAC‑GATGGGCTTATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTg < 1:803767/140‑1 (MQ=14) tAAGTTGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAg > 1:1877993/1‑140 (MQ=255) ttGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGa > 2:4500/1‑128 (MQ=255) ttGGCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCa > 2:1588045/1‑140 (MQ=255) ggCAGCATCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCaaa > 1:2470050/1‑140 (MQ=255) cagcaTCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAac > 2:1539864/1‑140 (MQ=255) agcaTCACCGAGAACAC‑AATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAaca > 2:41474/1‑140 (MQ=255) | CGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAA > NC_000913/279800‑280067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |