| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,320,303 | (C)5→4 | coding (261/1827 nt) | atoS → | sensory histidine kinase AtoS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,320,299 | 0 | C | . | 99.4% | 731.2 / ‑0.5 | 175 | coding (257/1827 nt) | atoS | sensory histidine kinase AtoS |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base . (85/88); minor base G (0/1); total (85/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 185 total aligned reads displayed.
GTTCAGCAGTCTTATCTGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTGCCCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGA > NC_000913/2320161‑2320434 | gTTCAGCAGTCTTATCTGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTGcc < 1:52659/140‑1 (MQ=255) cagcagTCTTATCTGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTGcccca < 2:1853850/140‑2 (MQ=255) agcagTCTTATCTGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTGccccat > 2:212653/1‑138 (MQ=255) cagTCTTATCTGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTGccccatta < 2:2156550/140‑5 (MQ=255) gTCTTATCTGAAAAATAGAAAACACGTTCGGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTAcc < 1:1145296/140‑1 (MQ=255) gTCTTATCTGAAAAAGAGAAAATACCTTCCGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTAcc < 1:739201/140‑1 (MQ=255) cTTATCTGAAAAAGAGAAAAAACTTTCTTCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGa > 1:2444910/1‑140 (MQ=255) cTTATCTGAAAAAGAGAAAAAACTTTCTTCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGa < 2:2444910/140‑1 (MQ=255) tGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAatat > 2:1767050/1‑140 (MQ=255) aaaaaGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATAtca < 2:71818/140‑1 (MQ=255) aaaaaGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATAtca < 2:2165970/140‑1 (MQ=255) aaaaaGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGACCGTATCCGCGCATTAAGTGCAGAACTTG‑CCTCATTACCGAAAATAtca > 2:1208504/1‑140 (MQ=255) aaaaaGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAACGTATCCGAGCACTAAATGCAGAACATG‑CCACATTACCGAAAATAtca > 2:697901/1‑140 (MQ=255) aaaaGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATAtcac > 2:2068441/1‑140 (MQ=255) aaGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATAtcactc > 1:2032069/1‑140 (MQ=255) agaAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACg < 1:1934449/140‑1 (MQ=255) aaaaaaCTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGcc > 2:416917/1‑140 (MQ=255) aaaaCTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCtt > 2:1788906/1‑140 (MQ=255) aaCTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTcc < 1:550873/140‑1 (MQ=255) tttCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACGGACAATATCACTCACGCCTTCCCTg > 1:1002878/1‑140 (MQ=255) tCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGc > 1:1693973/1‑140 (MQ=255) tGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCAt < 2:499018/140‑1 (MQ=255) tGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCAt < 2:1498489/140‑1 (MQ=255) tGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCAt < 1:1581661/140‑1 (MQ=255) gCCGTGGTCAACCTGTTTAATCTGGCACTCGGCGATCCCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATc < 1:697901/140‑1 (MQ=255) gCCGTGGTCAACCTGATTAATCCGGCACTGGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATc < 1:1208504/140‑1 (MQ=255) tGGTCAACCTGCTTAATCAGGCCCTAGACGAACGCCATGTTCTCTACAACGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTg < 2:949610/140‑1 (MQ=255) tGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTg < 1:212653/140‑1 (MQ=255) tGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTg < 1:1613118/140‑1 (MQ=255) tGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTg < 2:2032069/140‑1 (MQ=255) tAATCAGGCACTAGGCGATCGCAATGATCTCTACATCGATTTACCACGAGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTacaa < 2:1153059/140‑1 (MQ=255) aTCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTacaaca < 2:335327/140‑1 (MQ=255) tCAGGCACTAGGCGATCGCTATGATCTCTACTTCGACTTCCCACGTGATGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTAcaacaa < 2:862307/140‑1 (MQ=255) aGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACaaaa > 2:256632/1‑140 (MQ=255) gCACTAGGCGATCGCTATGATCCCTTCATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATg < 1:860290/140‑1 (MQ=255) gCACTAGGCGATCGCGATGATCGCTGCATGGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATg < 1:910461/140‑1 (MQ=255) cACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCGTTCCCTGACATAGGGGCTGGTTATTACAACAAAATGc > 1:795871/1‑140 (MQ=255) ggCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACCCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGAt > 2:1021341/1‑140 (MQ=255) gCGATCGCTATGATCTCTACATTGACTTACCTCGTAAGGAGCGTATCCCCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATg < 2:795871/140‑1 (MQ=255) gCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATg < 2:1897276/140‑1 (MQ=255) gCGATCGCTATGATCTCCACATCGACTTACCTCGTCAGGTGCGTATCCACGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATg < 2:649218/140‑1 (MQ=255) aTCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGa > 2:1743727/1‑140 (MQ=255) aTCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGa > 1:390574/1‑140 (MQ=255) aTCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGa > 1:283658/1‑140 (MQ=255) gCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATGGGTGCTGTTTAGTACAACAAAGTGCTGGATGCGATaa > 1:1031692/1‑140 (MQ=255) cTATGATCTCTACATTGACTTACCACGTGCGGAGCGTCTCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAAt < 1:643247/140‑1 (MQ=255) aTGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTTTTATAAAAAAATGTTGGATGCGATAATCa > 1:962567/1‑140 (MQ=255) tctcTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCGCTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTa < 2:220762/140‑1 (MQ=255) tctACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTAcg > 1:433163/1‑140 (MQ=255) ctACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTAcgc > 2:1551690/1‑140 (MQ=255) tACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTAcgcg > 2:170873/1‑140 (MQ=255) aCATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCCGTGCTGGTAATTCCAACAAAATGCTGGATGCGATAATCACCTACgcgc > 2:855009/1‑140 (MQ=255) cATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGcc < 2:1278506/140‑1 (MQ=255) aTCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCt > 1:2346001/1‑140 (MQ=255) cGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTc < 2:570610/140‑1 (MQ=255) cGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTc > 1:1462076/1‑140 (MQ=255) cGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTc > 2:367436/1‑140 (MQ=255) cGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTc < 1:1966019/140‑1 (MQ=255) cGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTc > 1:2466341/1‑140 (MQ=255) cGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTc > 1:416034/1‑140 (MQ=255) cGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGC‑ATAATCACCTACGCGCCTTCa > 2:1319327/1‑140 (MQ=255) cGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGAATTCGATAATCACCTACGCGCCTTc > 1:1105396/1‑140 (MQ=255) aCTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAATAAAATGCTGGAAGCGATAATCACCTACGCGCCTTCAg > 1:944855/1‑140 (MQ=255) aCTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTc < 1:2040504/138‑1 (MQ=255) aCTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAg > 2:2040053/1‑140 (MQ=255) aCTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAg > 2:2090101/1‑140 (MQ=255) aCTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAg > 1:1836391/1‑140 (MQ=255) aCTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAAAAAAATGCAGGATGCGATAATCCCCTACGCGCCTTCAg > 1:824849/1‑140 (MQ=255) cTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgc > 1:1665586/1‑140 (MQ=255) ttACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcg < 2:1836391/140‑1 (MQ=255) ttACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcg < 1:57543/140‑1 (MQ=255) ttACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcg < 2:2401853/140‑1 (MQ=255) ttACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcg < 2:2347232/140‑1 (MQ=255) ttACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGGTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcg < 1:1356351/140‑1 (MQ=255) tACCACGTGAGGAGCGTGTCCGTGCATTAAATGCAGAACATG‑CCCCATCACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcgc < 2:824849/140‑1 (MQ=255) tACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcgc < 2:1869806/140‑1 (MQ=255) tACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcgc > 2:600952/1‑140 (MQ=255) tACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcgc < 2:517563/140‑1 (MQ=255) tACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTT‑TTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCt > 2:340220/1‑140 (MQ=255) aCCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCt < 2:1604221/140‑1 (MQ=255) ccACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCta < 2:449582/140‑1 (MQ=255) aCGTGAGGAGCGTATTCGCGCATTACATGAAGAACTT‑CCCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCtata < 1:685845/140‑1 (MQ=255) tGAGGAGCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTatat > 1:1324440/1‑138 (MQ=255) gaggagCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcg > 2:140951/1‑131 (MQ=255) gaggagCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAgcg < 1:140951/131‑1 (MQ=255) agCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGaata > 2:2020466/1‑140 (MQ=255) gCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTc > 2:246357/1‑122 (MQ=255) gCGTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTc < 1:246357/122‑1 (MQ=255) gTATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATg < 1:170873/140‑1 (MQ=255) tATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGt < 2:1967679/140‑1 (MQ=255) tATCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGt > 1:209331/1‑140 (MQ=255) aTCCGCGCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTc > 2:1669474/1‑140 (MQ=255) cgcgCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGc < 1:2068441/140‑1 (MQ=255) cgcgCATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGAAGCGATAATTACCAAGGGCCCTTCAGCGCTATATCAGAATCATGTCGGc > 2:1189980/1‑140 (MQ=255) gcgcATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCg > 2:488779/1‑140 (MQ=255) cgcATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGt > 2:231751/1‑140 (MQ=255) cgcATTAAATGCAGAACTTG‑CCCCACTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGt > 2:1681525/1‑140 (MQ=255) gcATTAAATGCAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGtt < 1:2020466/140‑1 (MQ=255) cAGAACTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCg < 1:1247989/140‑1 (MQ=255) aCTTG‑CCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCa < 1:491760/130‑1 (MQ=255) | GTTCAGCAGTCTTATCTGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTGCCCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGA > NC_000913/2320161‑2320434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |