| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,646,583 | (G)6→5 | coding (743/2313 nt) | pbpC ← | peptidoglycan glycosyltransferase PbpC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,646,578 | 0 | G | . | 99.1% | 481.8 / ‑3.3 | 117 | coding (748/2313 nt) | pbpC | peptidoglycan glycosyltransferase PbpC |
| Reads supporting (aligned to +/- strand): ref base G (1/0); major base . (43/72); minor base T (0/1); total (44/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
ACCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGGGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATCCGGGCGAAGAC > NC_000913/2646443‑2646712 | aCCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCggggg > 2:2386539/1‑140 (MQ=255)aCCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCggggg > 1:251895/1‑140 (MQ=255) ccTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGgccagc < 2:2111694/140‑1 (MQ=255) ccTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGgccagc < 2:1842610/140‑1 (MQ=255) tttCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGgccagcca > 1:2049440/1‑140 (MQ=255) ttCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGccagccag < 2:527214/140‑1 (MQ=255) ttCCAGTTTTGCGCCAGCTCTTTCAGACGTCTTTGTAGATCGGCATCCGACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGccagccag < 2:721376/140‑1 (MQ=255) tCCAGTTTTGCGCCAGTTCTTCCAGGCGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGa < 1:867506/140‑1 (MQ=255) tCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGa < 1:1759241/140‑1 (MQ=255) tCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCAAGa < 2:1624176/140‑1 (MQ=255) tttGCTCCAGTTCTTCCAGACGTCGTTGACGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGtt < 1:1023091/140‑1 (MQ=255) tttGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGtt > 2:1451830/1‑140 (MQ=255) tttGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGtt > 2:2167682/1‑140 (MQ=255) tttGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGtt > 1:2409979/1‑140 (MQ=255) tGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGttct < 2:2409979/140‑1 (MQ=255) tGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGttct < 2:386336/140‑1 (MQ=255) tGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGttct < 2:1371043/140‑1 (MQ=255) cgcCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACTGCGGTGCCAGTTACGGGATTTGTC‑GGGGGCCAGCCAGATGGGttcttc > 2:866098/1‑140 (MQ=255) cgcCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGttcttc > 2:2223480/1‑140 (MQ=255) cgcCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGttcttc > 2:2041183/1‑140 (MQ=255) gTTCTTCCAGACGTCGTTGAAGCCCGGCATCCAACTTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTg < 2:810385/140‑1 (MQ=255) gTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGGGGCATCTG‑CCGGGGGCGAGCCGCGTGGGTTATTCCCTTg > 2:1212682/1‑140 (MQ=255) gTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTg < 2:2466253/140‑1 (MQ=255) gTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTg < 1:1451830/140‑1 (MQ=255) gTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTg < 1:1450602/140‑1 (MQ=255) gTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTg < 1:1311344/140‑1 (MQ=255) gTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTg < 1:2307858/140‑1 (MQ=255) gTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTACTAGTGCTTTTGTCGCTTTCGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTg < 1:1546315/140‑1 (MQ=255) tcCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGActct < 1:1267899/140‑1 (MQ=255) aCGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTAc > 2:227362/1‑140 (MQ=255) aCGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTAc < 1:1683040/140‑1 (MQ=255) cgtTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGc > 2:2170964/1‑140 (MQ=255) tGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCa < 1:1357210/140‑1 (MQ=255) tGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCa < 2:1794558/140‑1 (MQ=255) tGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCa < 2:488950/140‑1 (MQ=255) gAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCAc < 1:1857059/140‑1 (MQ=255) aaGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCatg < 1:349131/140‑3 (MQ=255) aaGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg < 2:395595/140‑1 (MQ=255) aaGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg < 2:1649115/140‑1 (MQ=255) aaGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg < 1:1772836/140‑1 (MQ=255) aGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACgg < 1:2159103/140‑1 (MQ=255) gACCGGTATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACggg < 2:1491988/140‑1 (MQ=255) gACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACggg < 2:461467/140‑1 (MQ=255) cGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGAcc > 1:531408/1‑140 (MQ=255) ggCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg > 1:348698/1‑134 (MQ=255) ggCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACg < 2:348698/134‑1 (MQ=255) ggCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACca < 1:1390197/140‑1 (MQ=255) gCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCGTTGACTGTTTTACGTGCTCACGGGACcac > 1:639151/1‑140 (MQ=255) tCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcacaca < 1:2167682/140‑1 (MQ=255) tCCAACGTAGTAGTGATTTTGTCGCTTTTGCGTTTACCGCGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACcacaca < 2:824910/140‑1 (MQ=255) aaCGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCATATGGGTTCGTCCATTGAATCTTTTAGCTGCGTACGGGACTACACACCt > 2:1152104/1‑140 (MQ=255) cGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTg < 1:1676204/140‑1 (MQ=255) cGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGAGGGGTTCTTTCCTAGACTCTTTTACCGGCTCCCGGGACCACACACCTTg > 2:686717/1‑140 (MQ=255) tagtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACgg > 1:2171165/1‑140 (MQ=255) tagtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACgg > 1:488527/1‑140 (MQ=255) tagtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGATCTCGGGACCACACACCTTGCACgg > 1:975960/1‑140 (MQ=255) tagtGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGAGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACgg > 1:474553/1‑140 (MQ=255) gtGATTTTTTCGCTTTTGCTTTTACCGAGCCTCATACGCTAAAACAGCTGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGcc < 2:1183181/140‑1 (MQ=255) tGATTTTGTCGCTTTAGCTTTTCCCTAGCTTCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCa < 1:1028160/140‑1 (MQ=255) aTTTTGTCGCTTTTGTTTTTACCGAGCATCATGCGCGTAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATc < 1:1079983/140‑1 (MQ=255) tttGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCg > 2:43021/1‑140 (MQ=255) tGTCGCTTTTGCTTTAACCGAGAATCATGGGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGtt < 1:1212682/140‑1 (MQ=255) gTCGCTTTTGCTTTTACCGAGCATCATGCGCGCAAACAGCGGTGCCAGTTGCCGCATTTGTC‑TGGGGCCAGCCAGATGGGTTCGTCACTTGCCTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGGCATCCGttg > 2:1538194/1‑139 (MQ=255) gTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTc > 1:611812/1‑140 (MQ=255) gTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTc < 1:2426181/140‑1 (MQ=255) gTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTc > 2:2426181/1‑140 (MQ=255) gTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTc > 2:2298884/1‑140 (MQ=255) gTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTc < 1:2298884/140‑1 (MQ=255) gTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGCGACCACACACCTTGCACGGCCATCCGTTc > 2:603747/1‑140 (MQ=255) cGCTTTTGCTTTTACTGAGCATCATACGCAAAAACAGAGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 1:1152104/140‑1 (MQ=255) cGCTTTTGCTTTTACCGCGCATCATGCGCGACAACCGCGCTGCCAGTTTCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 2:639151/140‑1 (MQ=255) cGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 2:2049440/140‑1 (MQ=255) cGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 1:1538194/140‑1 (MQ=255) cGCTTTTGCTTATACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCATATGTGTTCTTCCCTTGACACTTTTACCTGCTCACGGGACCACACTCCTTGCACGGCCATCCGTTCGa < 2:123713/140‑1 (MQ=255) tttgcttttACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCATGGGACCAGACATCTGGCACGGTCATCCGTTCGAGCAc > 1:742339/1‑140 (MQ=255) gAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa > 2:87640/1‑124 (MQ=255) gAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 1:87640/124‑1 (MQ=255) aGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGTGACCACACACCTAGCACGGCCATCCGTTCGGGCACTTTATTAcgcgcg > 2:642668/1‑140 (MQ=255) aGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa > 1:477267/1‑123 (MQ=255) aGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGa < 2:477267/123‑1 (MQ=255) aGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTAcgcgcg > 1:14317/1‑140 (MQ=255) tcatGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCtt < 1:2225892/140‑1 (MQ=255) catGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTc > 1:1263321/1‑140 (MQ=255) tGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCgg > 2:2263036/1‑140 (MQ=255) gcgcGAAAACAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGc > 1:1880880/1‑140 (MQ=255) aaaaCAGCGGTGCCAGTTGCGGGATTTGT‑TGGGGGCCGGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTGTTACGCGCGGCTTCGGCACGCt < 1:866098/140‑1 (MQ=255) aaaaCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCt < 2:251895/140‑1 (MQ=255) aaaaCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCt < 1:2263036/140‑1 (MQ=255) aaaaCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCt < 2:2268846/140‑1 (MQ=255) aaaaCAGCGGTGCCACTTGCGGTATCTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCt < 1:642668/140‑1 (MQ=255) aaCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTcc < 2:1997329/140‑1 (MQ=255) aCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGAGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTAcgcg > 2:1488440/1‑122 (MQ=255) aCAGCGGTGCCAGTTGCGGCATTTGTC‑GGGAGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTAcgcg < 1:1488440/122‑1 (MQ=255) gCGGTGCCAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCAAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGcc < 1:603747/140‑1 (MQ=255) cAGTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATc < 1:106925/140‑1 (MQ=255) gTTGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATCCg > 2:1998329/1‑140 (MQ=255) ttGCGGCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATCCgg < 1:2041183/140‑1 (MQ=255) tGCGGCATTTGTC‑GGGACCCAGTCAGATGGGCTGTTCCCCTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATCCggg < 2:1096575/140‑1 (MQ=255) gCATTTGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATCCGGGCGaa < 2:2171165/140‑1 (MQ=255) tttGTC‑GGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATCCGGGCGAAGAc > 2:1362019/1‑140 (MQ=255) | ACCGCCCTTTCCAGTTTTGCGCCAGTTCTTCCAGACGTCGTTGAAGACCGGCATCCAACGTAGTAGTGATTTTGTCGCTTTTGCTTTTACCGAGCATCATGCGCGAAAACAGCGGTGCCAGTTGCGGCATTTGTCGGGGGGCCAGCCAGATGGGTTCTTCCCTTGACTCTTTTACCTGCTCACGGGACCACACACCTTGCACGGCCATCCGTTCGAGCACTTTATTACGCGCGGCTTCGGCACGCTCCGGCCAACGATCCGGGCGAAGAC > NC_000913/2646443‑2646712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |