| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,922,549 | (C)5→4 | intergenic (‑109/+508) | atpI ← / ← rsmG | ATP synthase accessory factor/16S rRNA m(7)G527 methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,922,545 | 0 | C | . | 98.9% | 723.4 / ‑0.3 | 174 | intergenic (‑105/+512) | atpI/rsmG | ATP synthase accessory factor/16S rRNA m(7)G527 methyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (84/88); minor base T (1/1); total (85/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 182 total aligned reads displayed.
CGAGCAACGTTTCGACTCACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTG > NC_000913/3922406‑3922675 | cGAGCAACGTTTCGACTCACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTgcgc < 1:74742/140‑1 (MQ=255) tttCGACTCACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGAtt > 1:2064067/1‑140 (MQ=255) ttCGACTCACGAGCGACGCAGACATCACGTTCTTCCCTCTTGCTCCCTACGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGAttt < 2:710837/140‑1 (MQ=255) ttCGACTCACGAGCGACCCAGACATCACGTTTTTCTCTCTTGCTCCCTCCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGAttt < 2:731439/140‑1 (MQ=255) ttCGACTCACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGAttt < 1:1329322/140‑1 (MQ=255) tCGACTCACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTc < 2:425070/140‑1 (MQ=255) tCGACTCACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTc < 2:1245828/140‑1 (MQ=255) cGACTCACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGATTCAAGCATCAAAAAGCGGTCAAATTGTACGGTGCG‑CCCCGTGATTTCa > 2:923246/1‑140 (MQ=255) cGACTCACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCa > 2:1761321/1‑140 (MQ=255) tCACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACa < 2:1666438/140‑1 (MQ=255) cACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTtcaatcaa > 1:325138/1‑140 (MQ=255) cACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACaa > 1:1449498/1‑140 (MQ=255) aCGAGCGACACAGACGTCACGTATTACACGCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAAt < 1:1148074/140‑1 (MQ=255) aCGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAAc > 2:1920149/1‑137 (MQ=255) aCGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAAt < 2:2491673/140‑1 (MQ=255) aCGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAAt < 2:2350569/140‑1 (MQ=255) aGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAg < 1:1761321/140‑1 (MQ=255) aGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAg < 1:350132/140‑1 (MQ=255) acacAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAGAGCGGTCAGATTGTACGGTGCG‑CCCGGTGAATTCAAACAATAAGTAGc > 2:645091/1‑140 (MQ=255) cacaGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGcc < 1:478178/140‑1 (MQ=255) acaGACATCACGTTTTTCACTCGTGCTCCCTTCGAAGTATGCCGCGTGGCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCa < 2:851301/140‑1 (MQ=255) caGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCaa < 2:2214190/140‑1 (MQ=255) caGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCaa > 1:1408291/1‑140 (MQ=255) aGACATCACGTTTTTCACTCCTGCTGCCTTCGAGGTACGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCaaa < 1:1053972/140‑1 (MQ=255) aGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCaaa < 2:265143/140‑1 (MQ=255) aGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCaaa < 2:1752573/140‑1 (MQ=255) aCGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCaaa < 2:383283/133‑1 (MQ=255) aCGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGaa > 2:2038509/1‑140 (MQ=255) aCGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGaa > 2:1517931/1‑140 (MQ=255) aCGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGaa > 2:1109739/1‑140 (MQ=255) aCGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGC‑TCCCCGTGATTTCAACCAATAACTAGCCAAAAGGTGaa > 1:855551/1‑140 (MQ=255) gTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATa < 2:357060/140‑1 (MQ=255) gTTTTTCACTCCTGCTCCCTTCGAGGTATACCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATa < 1:1063158/140‑1 (MQ=255) tttttCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATaa < 2:405928/140‑1 (MQ=255) tttttCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATaa > 2:2198529/1‑140 (MQ=255) tttCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAAt > 2:378510/1‑140 (MQ=255) tCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCCAACAATAAGTAGCTTAAAGGTGAATAAATGt > 2:1063158/1‑140 (MQ=255) cTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTa < 2:457566/140‑1 (MQ=255) ccTGCTCCCTTCGAGGTATGCCTCGTGTCGTATAAAAATTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTaaa < 1:886597/140‑1 (MQ=255) ccTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTaaa > 1:609092/1‑140 (MQ=255) tGCTCCCTTCGAGGTATGCCGCGTGTCGCATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAata > 2:1903330/1‑140 (MQ=255) cTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTc < 1:198588/140‑1 (MQ=255) cTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTc < 2:1623002/140‑1 (MQ=255) ttCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTcc > 2:148362/1‑140 (MQ=255) ttCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGAAGCGAAAAGGTGTATAAATGTTTAAATATTTTTcc > 2:886597/1‑140 (MQ=255) ttCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGGCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGCAGCCAAAAGGTGAATAAATGTTTAAATATTTTTcc > 1:2084411/1‑140 (MQ=255) tCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCa < 1:368144/140‑1 (MQ=255) cGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAg > 2:2247949/1‑140 (MQ=255) cGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAg > 2:2104109/1‑140 (MQ=255) cGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAg > 1:1498764/1‑140 (MQ=255) cGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAAT‑AATGTTTAAATATTTTTCCAGt > 2:1338911/1‑140 (MQ=255) ggTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGc > 1:2130795/1‑140 (MQ=255) ggTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGc > 2:630704/1‑140 (MQ=255) aTGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAACTGCTTAAATCTTTTTCCAGTGCATa > 1:975610/1‑140 (MQ=255) aTGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATCTTTTTCCAGTGCATa > 1:907794/1‑140 (MQ=255) aTGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTc > 1:2386278/1‑131 (MQ=255) aTGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATa > 1:2308720/1‑140 (MQ=255) aTGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATa > 2:1883733/1‑140 (MQ=255) tGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATAc > 1:1925813/1‑140 (MQ=255) gCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACa > 1:1659818/1‑140 (MQ=255) gtgtCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGc < 1:381460/140‑1 (MQ=255) gtCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGa < 1:2247949/140‑1 (MQ=255) gtCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAAGAAATGTTGAAATATATTTCCAGTGCATACAATTGCGa > 1:720933/1‑140 (MQ=255) tataAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACttt < 1:1883733/140‑1 (MQ=255) tataAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACttt < 2:2126561/140‑1 (MQ=255) tataAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACttt < 1:421994/140‑1 (MQ=255) aaaCTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTg < 1:170104/140‑1 (MQ=255) tttctttAAGGCTTATAGTCAAGCAACAACAAGCGGTTAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTaa < 1:1177278/140‑1 (MQ=255) tttctttAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTaa < 2:1925813/140‑1 (MQ=255) ttctttAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAc < 2:2388721/140‑1 (MQ=255) tctttAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGc < 1:2489530/135‑1 (MQ=255) tctttAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAACATTATTCCAGTGCATATAATTACGACTTTTCTGCTAAcc > 2:776190/1‑140 (MQ=255) aaGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTGAAATATTTATCCGGTGGATACAATTACGACCGTTCTGCTAACCCTGtt > 2:1177278/1‑140 (MQ=255) ggCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAA‑TGCGACTTTTCTGCTAACCCTGTTCGa > 1:432675/1‑140 (MQ=255) gCTTAGAGTCAAGCATCAAAGAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGa > 2:1565294/1‑140 (MQ=255) gCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGa > 2:2058532/1‑140 (MQ=255) gCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGa < 2:2308720/140‑1 (MQ=255) gCTTAGAGTCAAGCACCAAAAATCGCTCAAATTATACCGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGa < 1:634588/140‑1 (MQ=255) gTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaa < 2:1479811/140‑1 (MQ=255) gTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaa < 1:630704/140‑1 (MQ=255) gTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTATTCGATCATGaa < 1:1389204/140‑1 (MQ=255) aaGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaaaaa > 2:2263470/1‑140 (MQ=255) aaGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaaaaa > 2:2487150/1‑140 (MQ=255) aaGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaaaaa > 1:392755/1‑140 (MQ=255) aaGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaaaaa > 1:2311562/1‑140 (MQ=255) aaGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaaaaa > 1:1801896/1‑140 (MQ=255) aaGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaaaaa > 1:70418/1‑140 (MQ=255) aaGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaaaaa > 1:562331/1‑140 (MQ=255) aaGCATCAAAAAGCGGTCAAATTATACGGTGCG‑CCACGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaaaaa > 2:2356551/1‑140 (MQ=255) aGCATCAAAAAGCGGTCAAATTTTACGGTGC‑TCCCCGTGATTTCAAACCATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAAc < 2:744087/140‑1 (MQ=255) aaaaGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATATAATTGCGACTTTCCTGTTAACCCTGCTCGAGGATGAAAAACTGTAAAt > 2:1083800/1‑140 (MQ=255) aaGCGGTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATaa < 2:1801896/140‑1 (MQ=255) gTCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGt < 2:562331/140‑1 (MQ=255) tCAAATTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTCACCCTGTTCGATCATGAAAAATTGTAAATAACGCGTa > 1:927813/1‑140 (MQ=255) aaTTATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAac < 1:242211/140‑1 (MQ=255) ttATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAacac < 2:476696/140‑1 (MQ=255) ttATACGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAacac < 1:203009/140‑1 (MQ=255) ttATACGGTGCG‑CCCAGTGATTTCAAACAATAAGTAGTCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAacac < 1:776190/140‑1 (MQ=255) ataCGGTGCG‑CCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTg < 1:1367232/140‑1 (MQ=255) ataCGGTGCG‑CCACGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTg < 1:2356551/140‑1 (MQ=255) | CGAGCAACGTTTCGACTCACGAGCGACACAGACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTG > NC_000913/3922406‑3922675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |