| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,157,840 | (A)7→6 | intergenic (+266/‑29) | ycfH → / → ptsG | putative metal‑dependent hydrolase YcfH/glucose‑specific PTS enzyme IIBC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,157,834 | 0 | A | . | 98.2% | 677.7 / 6.3 | 167 | intergenic (+260/‑35) | ycfH/ptsG | putative metal‑dependent hydrolase YcfH/glucose‑specific PTS enzyme IIBC component |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base . (88/75); minor base G (0/3); total (89/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 188 total aligned reads displayed.
TCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATTCTGCTGGGCGTCGGT > NC_000913/1157695‑1157967 | tctcCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTa > 2:172778/1‑140 (MQ=255) ctcCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACTGCGAGGCTCTCCCCCCTTGCCGCGCGTGAGAACGTaa > 1:821177/1‑140 (MQ=255) ctcCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAAATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGGGAGAACGTaa > 2:1362655/1‑140 (MQ=255) ccAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGGGGCTCTCCCCCCTTGCCACGCGTGAGAACGTaaaa > 2:1576441/1‑140 (MQ=255) cAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTaaaaa < 2:2152583/140‑1 (MQ=255) cAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTaaaaa < 1:2340761/140‑1 (MQ=255) cAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTaaaaa < 1:1308460/140‑1 (MQ=255) aTGATCTGAAGTTGAAACGTGATAGCCGTCAAACAATTTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGATTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTaaaaaag < 1:1896167/140‑2 (MQ=255) gATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTaaaaaagca > 1:1838549/1‑137 (MQ=255) aTCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTaaaaaagcac < 1:172778/140‑5 (MQ=255) cTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCAccc > 2:1428626/1‑140 (MQ=255) tGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTTCCCCCTTGCCAGGCATGAGAAGGT‑AAAAAAGCACCCa > 1:637604/1‑140 (MQ=255) tGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCa < 1:1377995/140‑1 (MQ=255) tGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCa < 2:2111242/140‑1 (MQ=255) aacttGAAACGCGATAGCCGTCACACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCCCTTAGACGCCCTGCACACGGCCAGCCTCTCCCCCCTCGCCACCCGCCAGAACCT‑CAAAAAGCACCCacc > 2:277834/4‑138 (MQ=255) aaGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATa < 1:1430144/140‑1 (MQ=255) aaGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATa < 2:239379/140‑1 (MQ=255) gAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGTGTGAGAACGTaaaaaag > 2:1531373/1‑126 (MQ=255) gAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCa > 1:2142274/1‑133 (MQ=255) aaaCGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAgg > 2:428533/1‑140 (MQ=255) aaCGTGATAGCCGTCAAACAAAGTGGCACGGAATTATGTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGa < 1:1209436/140‑1 (MQ=255) aCGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCTCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAg < 2:1630550/140‑1 (MQ=255) aCGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAg < 2:127025/140‑1 (MQ=255) aCGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAg < 1:2320743/140‑1 (MQ=255) cGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGc < 2:2079328/140‑1 (MQ=255) gTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTaaaaaagcac < 1:546303/125‑5 (MQ=255) gATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCAct < 1:428533/140‑1 (MQ=255) gATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCAct < 2:253005/140‑1 (MQ=255) aTAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCActc > 2:506239/1‑140 (MQ=255) aGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACtctc < 1:383424/140‑1 (MQ=255) ccGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTAAGAACGT‑GAAAAACCATCCATGCTCAGGAGCACTCTCaa > 2:1007668/1‑140 (MQ=255) tCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTa > 1:1082015/1‑140 (MQ=255) caaacaaaTTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCa < 2:2273613/129‑1 (MQ=255) caaacaaaTTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCAc < 1:1324924/130‑1 (MQ=255) aaacaaaTTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATg > 2:622638/1‑140 (MQ=255) tGAATTATTTTACTCCGTGTAACAACTAACGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCAtt < 1:749700/140‑1 (MQ=255) attattTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGc > 1:494601/1‑140 (MQ=255) ctctGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCAGTCTCAATAATGATTCAGAATGGATTTGCTAACCTGCa > 1:1195776/1‑140 (MQ=255) ctctGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGc < 1:1844371/125‑1 (MQ=255) ctctGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGc > 2:1844371/1‑125 (MQ=255) ctctGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCa > 1:1418339/1‑140 (MQ=255) ctctGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCa > 1:328503/1‑140 (MQ=255) ctctGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCa > 1:1904425/1‑140 (MQ=255) tctGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCaa < 2:1904425/140‑1 (MQ=255) ctGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCaaa < 2:1838549/140‑1 (MQ=255) tgtAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCAt > 2:10983/1‑122 (MQ=255) tgtAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAgg > 1:1872617/1‑140 (MQ=255) tgtAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAgg > 1:1586630/1‑140 (MQ=255) ataaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTGTCAATTATGTTTGAGAATGCATTTGATAACGTGCAAAAGGTCGGTaaa > 2:656815/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGGACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 1:95455/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTCAGAATGCTTTTGCTAACCTGCCAAAGGTCGGTAAATc > 1:909731/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCGTTTACTCACCTGCTAAAGGTCGGTAAATc > 1:1002119/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 2:2039161/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 2:2245113/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 1:2273838/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 1:2258935/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 2:2416900/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 2:2471340/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 2:358263/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 1:1527421/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 1:1273998/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATc > 1:1241645/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTCTAACAATGCATTTGCTGACCTTCAAAAGGTCGGTAAATc > 2:777225/1‑140 (MQ=255) aaaGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTAAATTATGTATAAGAATCCATTTGCTAACCTTCAAAAGGTCGGTAAATc > 2:955343/1‑140 (MQ=255) gggCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGCATGCATTAGCTGACGTGCAAAGGGTCGGTAAATCGCt > 1:973768/1‑140 (MQ=255) gcTTAGATGCCCTGTATGCGGCTAGGCTCTCCCCCTTTGCCACGCGTGGGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGAtg < 2:1062617/140‑1 (MQ=255) cTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGAtgc > 2:1316101/1‑140 (MQ=255) cTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGAtgc > 1:2490880/1‑140 (MQ=255) tAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGAtgctg < 1:1496430/140‑1 (MQ=255) gATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGcc < 2:1418339/140‑1 (MQ=255) aTGCCCTGTACACGGTGAGGCTTTCTCCCCTTGCCACACGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCg < 1:682681/140‑1 (MQ=255) tGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCgg > 1:1483134/1‑140 (MQ=255) gCCGTGTACACGGCGAGGCTGTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCGCTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGt < 2:555342/140‑1 (MQ=255) cccTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTa < 2:494601/140‑1 (MQ=255) ccTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTAt < 2:1586630/140‑1 (MQ=255) ccTGTACACGGCGAGGCACTCCCCCCTTGCCACGCGTGATAACGT‑AAACAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTAt < 2:809394/140‑1 (MQ=255) tGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCGTTTGCTAAACTGAAAACGGTCGGTATATCGATGATGCTGCTGGTATcc > 2:847127/1‑140 (MQ=255) tACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGt > 1:1822234/1‑140 (MQ=255) acacGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTa < 2:1822234/140‑1 (MQ=255) acacGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTa < 1:2416900/140‑1 (MQ=255) ggCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGc > 1:310140/1‑140 (MQ=255) ggCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGc > 1:1563864/1‑140 (MQ=255) cGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCt > 1:2458090/1‑140 (MQ=255) aGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTAt < 2:1241645/140‑1 (MQ=255) aGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTAt < 1:2089323/140‑1 (MQ=255) aGGCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTAt < 2:328503/140‑1 (MQ=255) ggCTCTCCCCCCTTGCCACGCGTGAGAACGT‑GAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTAt > 2:2356149/1‑126 (MQ=255) ggCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTa < 1:1693734/131‑1 (MQ=255) ggCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTa > 2:1693734/1‑131 (MQ=255) ggCTCTCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATc > 1:458714/1‑140 (MQ=255) gCTCTCCCCCCTTGCGACGCGTCAGCACG‑GAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCg < 1:777225/140‑1 (MQ=255) gCTCTCCCCCCTTGCCACGCGTCAGGACG‑GAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCg < 1:1002345/140‑1 (MQ=255) ctctCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGc < 2:1482250/140‑1 (MQ=255) ctctCCCCCCTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGc < 1:152908/140‑1 (MQ=255) ctctCCCCCCTTGCCAATCGTGAGAACGT‑AAAAGAGCACCCATACTCATGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGc < 2:1195776/140‑1 (MQ=255) cccccTTGCCACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCACTGATGCTGCCAGTATCCGTAGTGCCTATCGCAGGTa > 1:1057599/1‑140 (MQ=255) ccACGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATTctgctg > 1:1225393/1‑140 (MQ=255) aCGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATTCTGCTggg > 1:1754109/1‑140 (MQ=255) aCGCGTGAGAACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATTCTGCTggg > 1:2430764/1‑140 (MQ=255) agaACGT‑AAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATTCTGCTGGGCGTCGGt > 2:1999682/1‑140 (MQ=255) | TCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATTCTGCTGGGCGTCGGT > NC_000913/1157695‑1157967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |