| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,597,313 | (C)7→8 | pseudogene (774/5422 nt) | yneO ← | AIDA‑I family autotransporter YneO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,597,306 | 1 | . | C | 94.3% | 349.1 / 11.2 | 107 | pseudogene (781/5422 nt) | yneO | AIDA‑I family autotransporter YneO |
| Reads supporting (aligned to +/- strand): ref base . (5/1); new base C (57/42); total (63/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 118 total aligned reads displayed.
GAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAA‑C‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATA > NC_000913/1597170‑1597438 | gAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAA‑c‑cc > 2:519917/1‑140 (MQ=255)gAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAA‑c‑cc > 2:2018116/1‑140 (MQ=255)gAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAA‑c‑cc > 1:2186379/1‑140 (MQ=255) tatTGACTGTGCCATTACCGAATTATCCATTTTAGGGTCGGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAA‑c‑ccc‑cc‑c < 2:913550/140‑1 (MQ=255) aCTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAA‑c‑ccc‑cc‑ccccgc > 2:2136040/1‑135 (MQ=255) tgCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCCAACC‑CCC‑CC‑CTCGCGaa > 1:174628/1‑140 (MQ=255) tgCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAAt > 2:606038/1‑140 (MQ=255) tgCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAAt > 2:572059/1‑140 (MQ=255) tgCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTACAGACGAAA‑CCAATC‑CCC‑CC‑CTCGCGAAt > 1:1056640/1‑140 (MQ=255) tgCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAACCGTATTTGCAGACGCAA‑CCAATC‑CCC‑CC‑CTCGCGAAt > 1:1146450/1‑140 (MQ=255) gCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATa > 1:406041/1‑140 (MQ=255) gCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGACACCGATAATCGCATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATa > 2:932025/1‑140 (MQ=255) ttACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCg > 1:283182/1‑140 (MQ=255) ttACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCg > 1:1417340/1‑140 (MQ=255) tACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCCATAATCGTCTTTTCAGACGTAA‑CCAT‑C‑CCC‑CC‑CTCGCGAATAGTCGcc > 2:1041590/1‑140 (MQ=255) aaTATCCATTATAGATTCTGCGTACCGTGTTGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTcccc < 1:786533/140‑1 (MQ=255) tatCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAg < 1:2483398/140‑1 (MQ=255) tCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATa < 2:182559/125‑1 (MQ=255) tCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGtt > 1:1761116/1‑140 (MQ=255) tCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTAATTTCAGCCGTAA‑GCAATC‑CCC‑CC‑CTAGCGACTAGTCGCCTCCCCAGtt > 2:794153/1‑140 (MQ=255) cATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTcc > 1:122452/1‑140 (MQ=255) aTTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTCCAGCCGTAA‑CCAT‑CACCC‑CC‑CTCGCTAATAGGCGCCTCCCCAGTTCCt > 2:1123843/1‑140 (MQ=255) ataGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGa < 1:250863/140‑1 (MQ=255) ataGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGa < 2:1865047/140‑1 (MQ=255) agTCTGCGTACCGTGTTGACAGCGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAc < 1:919150/140‑1 (MQ=255) agTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAc > 1:2486219/1‑140 (MQ=255) gTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAcc < 2:1761116/140‑1 (MQ=255) tCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAT‑CCAA‑C‑CCCTCC‑CCCGCGAATAGTCGGCTCCCCAGTTCCTTGATTACCa > 2:919150/1‑140 (MQ=255) tCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCa > 2:1504436/1‑140 (MQ=255) tCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCa > 1:1374478/1‑140 (MQ=255) tCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCa < 1:1699700/140‑1 (MQ=255) tCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCa > 2:2225140/1‑140 (MQ=255) tGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CGAA‑C‑CCC‑CCACTCCCCACGAGTCGCCGCCCCAGTTCCTTGCTTACCAAt > 2:1202683/1‑140 (MQ=255) tGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAt > 2:2405586/1‑140 (MQ=255) tGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAt < 1:2225140/140‑1 (MQ=255) tGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAt > 2:1412092/1‑140 (MQ=255) tGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAt > 1:73134/1‑140 (MQ=255) tGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAt > 2:1711024/1‑140 (MQ=255) gCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAtt > 1:1929943/1‑140 (MQ=255) cGTACCGTGCTGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACTGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCGAttt > 2:1684666/1‑140 (MQ=255) cGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAAttt > 2:1737155/1‑140 (MQ=255) gTACCGTGCTGACAGAGTCTTGTTCCTGCATGTTCGGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTg < 2:1146450/140‑1 (MQ=255) gTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTg < 2:283182/140‑1 (MQ=255) gTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAAtt > 2:2204394/1‑140 (MQ=255) gTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAAtt < 1:1333593/140‑1 (MQ=255) gTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAAtt < 1:1504436/140‑1 (MQ=255) tgatgaCAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTc > 2:320076/1‑140 (MQ=255) tgatgaCAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTc > 2:2014643/1‑140 (MQ=255) tgaCAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCTCAGTTCCTGGATTTCCAATTTGAAATTCAAt > 2:895040/1‑140 (MQ=255) tgaCAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAAt > 1:1993617/1‑140 (MQ=255) gaCAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAAtt < 1:1737155/140‑1 (MQ=255) agagTCTTGATCCTGAACATTCAGGGTTCCGATACCGCTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAg < 1:1202683/140‑1 (MQ=255) gagTCTTGATCCTGCGCATTCAAGGATCCGATACCGGAGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAA‑C‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGa < 1:1041590/140‑1 (MQ=255) agTCTTGATCCTGCACATTCAGTGTCCCGATACCGGTTGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGa < 1:895040/140‑1 (MQ=255) gTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGaa > 1:29055/1‑140 (MQ=255) gTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGa > 1:1848853/1‑139 (MQ=255) gTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGa < 2:1848853/139‑1 (MQ=255) cTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATc > 1:1993743/1‑140 (MQ=255) ttGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCa < 1:2204394/140‑1 (MQ=255) ccTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCattatt < 1:606038/140‑1 (MQ=255) cTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTCATTACCACTTTGAAGTTCAATCGAGGAATCATTAttt > 1:1163935/1‑140 (MQ=255) tGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTAtttt < 1:2018116/140‑1 (MQ=255) tCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAg > 2:322444/1‑140 (MQ=255) tCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAg > 2:424567/1‑140 (MQ=255) tCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAg > 2:579798/1‑140 (MQ=255) tCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAg > 2:43633/1‑140 (MQ=255) cAGGGTTCAGATACCGGTGGCATTGCCACCGTTGACCGTTTTTTCAGCAGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGc < 2:1163935/140‑1 (MQ=255) tCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCg < 2:1929943/140‑1 (MQ=255) cGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGcc > 2:1731010/1‑140 (MQ=255) gATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCa > 1:431968/1‑140 (MQ=255) gATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCa > 1:2008844/1‑140 (MQ=255) gTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCtttt < 2:1993617/140‑1 (MQ=255) tGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCAGTATTTTTTATTAGCTACTCGCTACCCTTTTCAACGAc > 1:887177/1‑140 (MQ=255) cACCGATAATCGTATTTTCAGCTGTAA‑CCAATC‑CCG‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAAc < 2:1056640/140‑1 (MQ=255) cACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAAc < 2:1324641/140‑1 (MQ=255) cACCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAAc < 1:417801/140‑1 (MQ=255) aCCGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAAcc > 2:2177214/1‑140 (MQ=255) cGATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTg > 1:2420422/1‑140 (MQ=255) gATAATCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTgg < 1:424567/140‑1 (MQ=255) tCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACg > 2:1779952/1‑126 (MQ=255) tCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACg < 1:1779952/126‑1 (MQ=255) tCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCAtt > 2:2046482/1‑140 (MQ=255) tCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCAtt > 1:1519442/1‑140 (MQ=255) tCGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCAtt > 1:2269644/1‑140 (MQ=255) cGTATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTa > 2:2134838/1‑140 (MQ=255) tATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACt < 2:2486219/140‑1 (MQ=255) tATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACt < 1:378817/140‑1 (MQ=255) tATTTTCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACt < 1:1412092/140‑1 (MQ=255) ttCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGccc < 2:322075/140‑1 (MQ=255) ttCAGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGccc < 2:1519442/140‑1 (MQ=255) aGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGcc > 1:7239/1‑140 (MQ=255) aGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGcc > 2:267181/1‑140 (MQ=255) aGCCGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGcc < 2:2008844/140‑1 (MQ=255) cGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGa < 2:2269644/140‑1 (MQ=255) cGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGa < 2:2186379/140‑1 (MQ=255) cGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGa < 2:1993743/140‑1 (MQ=255) cGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGa < 1:579798/140‑1 (MQ=255) cGTAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACACTTTTCAGCGAGAAGCTGGCCGTTACTGCCCGCCTGa > 1:664947/1‑140 (MQ=255) tAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATa > 2:2388160/1‑140 (MQ=255) tAA‑CCAACC‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATa > 1:268574/1‑140 (MQ=255) | GAAATATTGACTGTGCCATTACCGAAATATCCATTATAGAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAA‑CCAA‑C‑CCC‑CC‑CTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATA > NC_000913/1597170‑1597438 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |