| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,727,494 | (G)6→8 | coding (836/1098 nt) | nemA → | N‑ethylmaleimide reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,727,488 | 1 | . | G | 94.6% | 442.1 / 14.3 | 130 | coding (830/1098 nt) | nemA | N‑ethylmaleimide reductase |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base G (63/60); total (67/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
| * | NC_000913 | 1,727,488 | 2 | . | G | 94.6% | 438.4 / 14.3 | 130 | coding (830/1098 nt) | nemA | N‑ethylmaleimide reductase |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base G (63/60); total (67/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
Only 100 of 159 total aligned reads displayed.
ATTGGCATTCGCGTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑G‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTTAATTGATGCG > NC_000913/1727349‑1727618 || tGGCATTCGCGTTTCGCCAATCTGTTCTTTCCAGAACGCAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑g < 1:849727/140‑1 (MQ=255) tGGCATTCGCGTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑g > 1:1264885/1‑140 (MQ=255) tGGCATTCGCGTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑g < 2:1834150/140‑1 (MQ=255) cATTCGCGTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggg > 2:2215544/1‑140 (MQ=255) ttCGCGTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGGATGAAGAAGCCGATGCCCTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggggg > 1:2468862/1‑139 (MQ=255) cgcgTTTCACCAATCTGTACTTCCCCGAACACAGATACCGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggggggt < 1:1115878/140‑4 (MQ=255) cgcgTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggggggt < 1:380834/140‑4 (MQ=255) cgTTTCACCAATCGGTACTTTCCAGCACACAGATAACCGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggggggtga < 1:686829/140‑6 (MQ=255) cgTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggggggtga < 2:1309950/140‑6 (MQ=255) cgTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggggggtga < 1:1273721/140‑6 (MQ=255) gTTTCACCAATCGGTCCTTTCCCGATCACCGATAACGCCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggggggtgaa < 1:649850/140‑7 (MQ=255) gTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggggggtgaa < 1:1837032/140‑7 (MQ=255) aCCAATCGGTACTTTCCAGAACGCAGATAACGGCCCGAATGAAGAAGCGGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGta < 2:1048018/140‑1 (MQ=255) aCCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGta < 1:619380/140‑1 (MQ=255) tACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggggggt > 1:2398631/1‑120 (MQ=255) tACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑g‑‑gggggggt < 2:2398631/123‑4 (MQ=255) aCTTTCCAGAACACATATAACGCCCTGAACGAAGAAGTCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCg < 1:640949/140‑1 (MQ=255) tttCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCTGATTGGGTGG‑‑G‑‑GGGGGTGAACCGTATACTGATGCGtt > 1:1002818/1‑140 (MQ=255) aGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGt > 1:1366299/1‑140 (MQ=255) aTAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAc > 2:2098474/1‑140 (MQ=255) aTAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAc > 1:1574894/1‑140 (MQ=255) aCGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAcgcg > 2:139561/1‑140 (MQ=255) ggCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGcc > 2:327942/1‑140 (MQ=255) cccGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCg > 1:1416700/1‑140 (MQ=255) ccGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACTGTATACTAATGGGTTCCGCGAAAAAGTACGCGCCCGt > 1:883080/1‑140 (MQ=255) ccGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGt > 2:166752/1‑140 (MQ=255) ccGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑GGAGGGGGTGACCCGCATAATGATGCGTCCCGCGAAAAAGTACGCGCCCGt > 2:831275/1‑140 (MQ=255) gAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGttt > 2:2061906/1‑140 (MQ=255) gAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGttt > 2:288294/1‑140 (MQ=255) aaTGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTc > 1:826548/1‑140 (MQ=255) tGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCa < 2:1574894/140‑1 (MQ=255) gaagaaGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCAc > 2:2358662/1‑140 (MQ=255) ccGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGa > 1:2093058/1‑140 (MQ=255) tGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATAGTGATGCGTGCCGAGAACAAGTACGCGCCCGTTTCCACGGTCCGATTAt > 2:864863/1‑140 (MQ=255) aCTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCgg < 1:2215544/140‑1 (MQ=255) tGTATCTGTTTGAACAGCTGGGTAAACGCGGGATTTCTTTTCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg < 2:1207140/140‑1 (MQ=255) tGTATCTGTTTGAACAACTGGGTAAACGCGATATTTCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg < 2:1137521/140‑1 (MQ=255) tGTATCTGATTGAACAATTGGGTAAACGCGGAATTTCTTTTCTGCATAGGTCAGAACCAGATTGGGTGG‑‑G‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg < 2:796204/140‑1 (MQ=255) tGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg < 1:1775177/140‑1 (MQ=255) tGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg < 1:122289/140‑1 (MQ=255) tGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg < 1:327942/140‑1 (MQ=255) gTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGGGAACCGTATACTGATGCGTTCCGCGAACAAGTACGGGCCTGTGTCCACGTTCCGATTATCGgcgc > 1:805111/1‑140 (MQ=255) gTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGGGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcgc > 2:2436205/1‑140 (MQ=255) tATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTAt < 2:471271/133‑1 (MQ=255) tATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCa < 2:1591012/140‑1 (MQ=255) tATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCa < 1:615802/140‑1 (MQ=255) tATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCa < 2:435217/140‑1 (MQ=255) tATCTGATCGAACAACTCGGTAGACGCGGCGATTCTTATATGCATATGGCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCa < 2:1210595/140‑1 (MQ=255) cTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCTGTTCCCCCGGTCCAATTATCGGCGCAGGt > 1:1207140/1‑140 (MQ=255) cTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGt < 1:166752/140‑1 (MQ=255) cTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGCACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGt > 1:1782130/1‑140 (MQ=255) cTGATTGAACAACTGGGTAAACGCGGCATGGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGt < 1:831275/140‑1 (MQ=255) tGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg > 1:2373143/1‑130 (MQ=255) tGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg < 1:2357418/130‑1 (MQ=255) tGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg > 2:2357418/1‑130 (MQ=255) tGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCa > 1:1749705/1‑132 (MQ=255) tGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATa < 1:172008/140‑1 (MQ=255) tGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCAGAAAAGTACTCGCGCGTTTCCACGGTGCGATTATCGGCGCAGGTGCATa > 2:690227/1‑140 (MQ=255) gAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATac < 2:19724/140‑1 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGTGG‑‑G‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCCCCCATTTCCACGGTCCCATTATCGGCGCAGGTGCATaca > 2:981628/1‑140 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg > 1:177405/1‑128 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg < 2:177405/128‑1 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAgg > 1:1307952/1‑132 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGt < 2:1883312/133‑1 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATaca > 2:1993255/1‑140 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATaca > 2:2482342/1‑140 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATaca > 2:2441690/1‑140 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATaca < 1:1978033/140‑1 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATaca < 1:2098474/140‑1 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATaca > 1:1564457/1‑140 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATaca > 2:1293038/1‑140 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATa > 2:1759751/1‑138 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATa > 1:2352812/1‑138 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATa < 2:2352812/138‑1 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCACGTTTCCCCGGACCCATTATCTGCGCAGGTGCATaca > 1:970856/1‑140 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCCCCCCTTTCCACGGTCCGATTAACGGCGCAGGTGCATaca > 2:1037969/1‑140 (MQ=255) aacaacTGGGTAAACGCGGCATTGCTTATCTACATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGt > 1:1883312/1‑133 (MQ=255) acaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATacac < 2:1264885/140‑1 (MQ=255) tGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAg > 2:354141/1‑140 (MQ=255) gggTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGa < 1:1813840/140‑1 (MQ=255) ggTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGaa > 2:1542908/1‑140 (MQ=255) aCGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGc > 1:462008/1‑140 (MQ=255) cTTATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGa < 2:1564457/140‑1 (MQ=255) ttATCTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGAt > 1:1794659/1‑140 (MQ=255) cTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGc < 1:520230/140‑1 (MQ=255) cTGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGCAGCAAAAGCAGAAACGCTGATCGGc > 1:1137477/1‑140 (MQ=255) tGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCa < 2:1794659/140‑1 (MQ=255) tGCATATGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCATATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCa < 1:101029/140‑1 (MQ=255) gCATATGTGAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCaa < 1:2436205/140‑1 (MQ=255) atatGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAg > 2:2351582/1‑140 (MQ=255) tatGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCa > 2:594256/1‑136 (MQ=255) tatGTCAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAgg > 2:480108/1‑140 (MQ=255) cAGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGCAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTGaa > 2:1487873/1‑140 (MQ=255) aGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTTAAt > 1:1990048/1‑140 (MQ=255) aGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTTAAt > 2:2127229/1‑140 (MQ=255) aGAACCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTTAAt < 1:480108/140‑1 (MQ=255) aaCCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGGTGAAACGCTGATCAGCAAAGGGTTAATTg > 1:989933/1‑140 (MQ=255) aaCCAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTTAATTg > 1:115559/1‑140 (MQ=255) aaCCAGATTGG‑‑GC‑‑GGAGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTTAATTg > 2:2276592/1‑140 (MQ=255) ccAGATTGG‑‑GCGGG‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTTAATTGAt < 1:354141/140‑1 (MQ=255) || ATTGGCATTCGCGTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGG‑‑GC‑‑G‑‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTTAATTGATGCG > NC_000913/1727349‑1727618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |