| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,999,680 | (G)7→8 | coding (212/756 nt) | ygeR ← | LysM domain‑containing putative peptidase lipoprotein YgeR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,999,673 | 1 | . | G | 93.2% | 240.5 / 8.8 | 74 | coding (219/756 nt) | ygeR | LysM domain‑containing putative peptidase lipoprotein YgeR |
| Reads supporting (aligned to +/- strand): ref base . (3/2); new base G (27/41); total (30/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGGCCAGGATGATTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTATCGGAT > NC_000913/2999534‑2999799 | gcggcCAGGATGATTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCACCAACCACTTTTAGTTGCTGAACAACTTCAATGGTGT‑aa > 2:745673/1‑140 (MQ=255) ggcCAGGATGATTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGATGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGG‑AA‑‑g‑g > 2:170723/1‑140 (MQ=255) gcCAGGATGATTTCGGTTCCGCCGATGACGGTGTATCCGCTGCGGTTTCGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑g‑gg < 2:768370/140‑1 (MQ=255) gcCAGGATGATTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑g‑gg < 1:2224123/140‑1 (MQ=255) gcCAGGATGATTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑g‑gg > 2:352706/1‑140 (MQ=255) cAGGATGATTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑g‑gggg < 2:525659/140‑1 (MQ=255) aGGATGATTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑g‑ggggg < 1:1727956/140‑1 (MQ=255) gatgatTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTGCTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑g‑ggggggg < 1:1708055/140‑2 (MQ=255) gatgatTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑g‑ggggggg < 2:2251632/140‑2 (MQ=255) gatgatTTCGGTACCGCGGATGGCGGTGTAACCGAGGCGTTTTTGGTCCTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑g‑ggggggg < 2:1013757/140‑2 (MQ=255) tgatTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTAGTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑G‑GGGGGGgaa > 2:1511995/1‑140 (MQ=255) gatTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑g‑gggggggaaa < 2:1252864/140‑5 (MQ=255) ggTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGt < 1:2162644/140‑1 (MQ=255) cGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGt > 2:312169/1‑140 (MQ=255) cGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGGTTATTTACGGGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGt > 2:513138/1‑140 (MQ=255) attaCGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCgcgc > 1:1592499/4‑140 (MQ=255) atgaCGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCgcgc < 1:1511995/140‑1 (MQ=255) tgaCGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGcc < 2:1939361/140‑1 (MQ=255) gcGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCCCCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAg < 2:2062488/139‑1 (MQ=255) aCGGTGTAACCGATGGGGTTTTGGTTGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAg < 1:975759/140‑1 (MQ=255) tgtAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCt > 2:403941/1‑140 (MQ=255) gtAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCtt < 1:403941/140‑1 (MQ=255) aaCCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTACAATGGTGC‑AA‑‑GTGGGCGGAAATGCTGTTCGGTCGCGCCAGTTCtttt > 2:837341/1‑140 (MQ=255) aaCCGATGCGGTTTTCGTCGTTCATATGGCGGTTGATGTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCtttt < 1:652120/140‑1 (MQ=255) cGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACg < 2:2139284/140‑1 (MQ=255) cGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACg < 1:312169/140‑1 (MQ=255) aTGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCt < 2:183153/140‑1 (MQ=255) aTGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCt < 1:352706/140‑1 (MQ=255) aTGCGGTTTTGGTCGTTGATTTAGCGGTTGACTTATGTGTAATACTGCGACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCt < 2:1088336/140‑1 (MQ=255) tGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTGCAGTCGCGCTAGTTCTTTTACGCTg > 1:819105/1‑140 (MQ=255) gCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTgg > 2:1511933/1‑140 (MQ=255) gCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTgg > 2:2107502/1‑140 (MQ=255) ttGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCg > 1:346453/1‑140 (MQ=255) ttGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTgcg < 1:178024/140‑1 (MQ=255) tGATTTGGCGGTTGATTGACGTATAATACTGGTACTTTTCGCCCCACCGAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTgcgc < 2:819105/140‑1 (MQ=255) tGATTTGGCGGTTGAGTTACGTTTATTACTGCTACTTGTCGCCCCACCCAG‑TTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGcgcg < 1:908026/140‑1 (MQ=255) gATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGcgcg < 2:346453/140‑1 (MQ=255) ttGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGaaa < 1:1871261/140‑1 (MQ=255) tGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAAt < 2:94514/140‑1 (MQ=255) ggtggTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATa < 2:551390/137‑1 (MQ=255) ggCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATa < 2:72465/140‑1 (MQ=255) ggCGGTTGATTTACGTGAAATAATGCTACTTGTCGCCCCCCCCAGTTTGAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATa < 2:961264/140‑1 (MQ=255) ttGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGata < 1:1804123/140‑1 (MQ=255) ttGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGata < 1:2107502/140‑1 (MQ=255) ttGATTTACGTGTAACACTGCTACTCTTCCCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGata < 1:1077334/140‑1 (MQ=255) tttACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGc < 1:170723/140‑1 (MQ=255) aCGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTa < 1:2023904/140‑1 (MQ=255) tgtAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATcc > 2:102986/1‑140 (MQ=255) tAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATcccc < 1:102986/140‑1 (MQ=255) aaTACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATccccc > 1:289529/1‑140 (MQ=255) gCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTc > 1:375561/1‑140 (MQ=255) cTACTTTTCGCCCCACCGAGTTTTAGTTTCTCACCTACTTCAATGGTGC‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCa < 2:759335/140‑1 (MQ=255) cTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAGGG‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTc > 1:2153288/1‑140 (MQ=255) cTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCa > 2:95085/1‑140 (MQ=255) cTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCa > 1:2269609/1‑140 (MQ=255) cTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCa > 1:1460908/1‑140 (MQ=255) tACTTTTCGCCCCACTCAGTTTTAGCTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCAc < 1:837341/140‑1 (MQ=255) tACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCAc > 1:1515399/1‑140 (MQ=255) tACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCAc < 2:1592499/140‑1 (MQ=255) tttCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGgtg > 2:459070/1‑140 (MQ=255) ttCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGgtgt > 2:1270428/1‑140 (MQ=255) cGCCCCACCCAATTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTaa > 2:1929232/1‑140 (MQ=255) ccccACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGTCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAGTACGATAAAGCGTACCCCCCCATTTCACGGTGTAAAc > 1:712739/1‑140 (MQ=255) ccacccaGTTTTAGTTTCTGACTAACTTCAACGGTCT‑AAC‑G‑GGGGGGACATGTCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACgg < 2:712739/140‑1 (MQ=255) ccacccaGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACgg < 2:604962/140‑1 (MQ=255) cacccaGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATATGATATAGGGTA‑GCCGCCGTTTGACGGTGTAAACGGAg > 1:707081/1‑140 (MQ=255) acccaGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AAGGG‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGa < 2:2153288/140‑1 (MQ=255) ttttAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCACGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGaa < 1:2099667/140‑1 (MQ=255) ttAGTTTCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATa < 2:375561/140‑1 (MQ=255) aGTTTCTGACCAACTTCAATGGTGT‑AAGGG‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGGATCCCCCAGTTTCATGGTGTAGACGGAGCCGGAATAc > 1:998863/1‑140 (MQ=255) ttCTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTc < 2:1350578/140‑1 (MQ=255) cTGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCt < 1:513138/140‑1 (MQ=255) tGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTg > 1:2320550/1‑140 (MQ=255) tGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTg > 1:2411357/1‑140 (MQ=255) tGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTg > 1:931301/1‑140 (MQ=255) tGACCAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTg > 2:1924981/1‑140 (MQ=255) cAACTTCAATGGTGTAAA‑‑G‑GGGTGGAAATGCGGTTGAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTATc < 2:874872/140‑1 (MQ=255) cAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTATc < 2:2411357/140‑1 (MQ=255) cAACTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTATc < 2:931301/140‑1 (MQ=255) aCTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTa < 1:1701302/136‑1 (MQ=255) aCTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTa > 2:1701302/1‑136 (MQ=255) cTTCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTATCGga > 2:1380297/1‑140 (MQ=255) ttCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTATCGgat < 1:1924981/140‑1 (MQ=255) ttCAATGGTGT‑AAG‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTATCGgat < 1:1511933/140‑1 (MQ=255) t‑AA‑‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTATc < 2:590588/125‑1 (MQ=255) t‑AA‑‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTATc > 1:590588/1‑125 (MQ=255) | GCGGCCAGGATGATTTCGGTACCGCTGATGACGGTGTAACCGATGCGGTTTTGGTCGTTGATTTGGCGGTTGATTTACGTGTAATACTGCTACTTTTCGCCCCACCCAGTTTTAGTTTCTGACCAACTTCAATGGTGT‑AA‑‑G‑GGGGGGAAATGCCGTTCAGTCGCGCCAGTTCTTTTACGCTGGTTCCCGTGGTGCGCGAAATACGATATAGCGTATCCCCCCGTTTCACGGTGTAAACGGAGCCGGAATACGTTCCTGTATCGGAT > NC_000913/2999534‑2999799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |