| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,157,712 | (C)6→7 | coding (63/927 nt) | yqhG → | DUF3828 domain‑containing protein YqhG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,157,706 | 1 | . | C | 95.1% | 486.8 / 13.8 | 142 | coding (57/927 nt) | yqhG | DUF3828 domain‑containing protein YqhG |
| Reads supporting (aligned to +/- strand): ref base . (6/1); new base C (61/74); total (67/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.20e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
Only 100 of 172 total aligned reads displayed.
ATCATCATGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑C‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTG > NC_000913/3157570‑3157841 | atcatcatGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑c‑cc > 1:2292600/1‑140 (MQ=255)atcatcatGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTCAGCAGCCCTGGGAAGTTTTACAGTACACGCACA‑G‑c‑cc > 1:809829/1‑140 (MQ=255) tcatcatGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑c‑cc‑c > 1:1988912/1‑140 (MQ=255) tcatcatGAAGAGCCGTAAGCTCTTAAAAGGTCAACTCATCTATATCCCGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑c‑cc‑c < 2:1177191/140‑1 (MQ=255) catcatGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑g < 2:265120/135‑1 (MQ=255) catcatGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑c‑cc‑cc > 2:1920994/1‑140 (MQ=255) catcatGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑c‑cc‑cc > 2:1487577/1‑140 (MQ=255) catcatGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACGTCTGTTTTGAGCAGCCTTGGCAAGTTTTACAGTACACGCACA‑G‑c‑cc‑cc > 2:812554/1‑140 (MQ=255) atcatGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑c‑cc‑ccc > 1:1933348/1‑140 (MQ=255) tcatGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑c‑cc‑cccc < 1:1684445/140‑2 (MQ=255) tGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑c‑cc‑cccctca > 2:1561784/1‑136 (MQ=255) tGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCACTGGCAAGTTTGACGGTACACGCACA‑G‑c‑cc‑cccctca > 1:693929/1‑136 (MQ=255) cAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑Tcaca < 2:2181438/140‑1 (MQ=255) cAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑Tcaca < 2:1383712/140‑1 (MQ=255) cAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑Tcaca < 2:1937806/140‑1 (MQ=255) cAGAGCCGGAAGCTCATAAAAGAACCACTCATCTATAACCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑Tcaca < 1:1185655/140‑1 (MQ=255) agCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGGAAGTTTTACCGTACTCGCACACC‑C‑CC‑CCC‑TCACAGAc > 1:773860/1‑140 (MQ=255) agCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGAc > 1:1270334/1‑140 (MQ=255) agCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGAc > 2:2331159/1‑140 (MQ=255) agCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGAc > 1:469458/1‑140 (MQ=255) agCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATG‑AAATAATACTTCTGTTTTTAGCAGCCCTGCCAATTTTGACCGTACACGCACC‑GCC‑CC‑CCC‑TCACAGAcc > 2:799896/1‑140 (MQ=255) gCCGGAAGCTCTTAAAAGAACAACTTATCTATATCCGTGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGAcc < 1:950615/140‑1 (MQ=255) gCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGGTAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGAcc > 1:287042/1‑140 (MQ=255) gCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGAcc > 1:2238533/1‑140 (MQ=255) ccGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACGGTATACGCACA‑G‑CACC‑CCC‑TCACAGACCg > 1:1049309/1‑140 (MQ=255) ccGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑c‑c > 2:1908972/1‑125 (MQ=255) ccGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑c‑c < 1:1908972/125‑1 (MQ=255) cGGAAGCTCTTAAAAGAGCAACACATCTATACCCGGGATTAACGCAACAGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGt < 2:809829/140‑1 (MQ=255) cGGAAGCTCTTAAAAGAACAACTCAACTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGt < 1:1017676/140‑1 (MQ=255) ggAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGCTTTACCGTACACGCACA‑G‑C‑CCACCC‑TCACAGACCGTa > 1:1011502/1‑140 (MQ=255) gAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGAcc > 2:1536905/1‑136 (MQ=255) gAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGAcc < 1:1536905/136‑1 (MQ=255) gAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAg > 1:2345801/1‑140 (MQ=255) gAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAg > 2:1315230/1‑140 (MQ=255) tAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGaacaaaca < 1:1385682/140‑1 (MQ=255) aaaGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGt < 1:498120/140‑1 (MQ=255) aaaGAACAACTCATCTACATCCAGGATAAACCCAAGGGAAAGGTGAAACACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGt < 2:773860/140‑1 (MQ=255) gAACAACTCATCTATATCCGGGATAGACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCg < 1:892813/140‑1 (MQ=255) gAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCg < 2:1988912/140‑1 (MQ=255) aacaacTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCgg > 2:1703919/1‑140 (MQ=255) acaacTCATCTATATCCGGGATAAAGGCATCGGAGAGTTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGc < 1:812554/140‑1 (MQ=255) aacTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGt < 2:287366/133‑1 (MQ=255) aacTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCat > 2:2301974/1‑140 (MQ=255) aacTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCat > 2:109932/1‑140 (MQ=255) acTCATCTATATCCGGGTTAAACGCAACGGACAGGCGAATAACAGATGCAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCata < 2:656698/140‑1 (MQ=255) acTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCata < 2:1270334/140‑1 (MQ=255) cTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCatat > 2:380722/1‑140 (MQ=255) cATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATAttt > 1:1581513/1‑140 (MQ=255) aTCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTa > 1:385483/1‑140 (MQ=255) tCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTAt < 1:1315230/140‑1 (MQ=255) tCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTAt > 1:262106/1‑140 (MQ=255) tCTATATCCGGGATAAACGCAAAGGAGAGGTGAAACACACATGAAAATTATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTAt < 2:693929/140‑1 (MQ=255) tataTCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAG‑CCGGCATATTTATCAg < 1:1920994/140‑1 (MQ=255) atatCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAg < 1:380722/140‑1 (MQ=255) atatCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAg < 2:469458/140‑1 (MQ=255) atatCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAg < 1:1339518/140‑1 (MQ=255) atatCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAg < 2:2292600/140‑1 (MQ=255) tCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACGGACCGTAAAACTAATAGTCCGACATATTTATCAGAAc > 1:1168232/1‑140 (MQ=255) ccGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACt > 2:2232654/1‑140 (MQ=255) gggATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCata > 1:215733/1‑126 (MQ=255) gggATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACtat > 2:1634646/1‑140 (MQ=255) ggATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACtata > 1:2385341/1‑140 (MQ=255) gATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATaa > 2:300510/1‑140 (MQ=255) gATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAATCAGGCATATTTATCAGAACTATaa > 1:658714/1‑140 (MQ=255) aTAAACGCAACGGAGAGGTGAAGAACAGACGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATaaa < 1:858682/140‑1 (MQ=255) aTAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATaaa > 1:156773/1‑140 (MQ=255) tAAACGCAACGGAGACGTGAAACACCGAT‑CAAATAATCCTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATc < 1:799896/140‑1 (MQ=255) aCGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGACCAAACAGGCCGGCAAATTTATTAGAACTATAAATCAg > 1:1085229/1‑140 (MQ=255) cGCAACGGGGAGGTGACAAACACATGAAAAAGAGACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGa < 2:1157655/140‑1 (MQ=255) aCGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAAt > 1:19482/1‑132 (MQ=255) aCGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAAt < 2:19482/132‑1 (MQ=255) aCGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGcc > 2:1678963/1‑140 (MQ=255) aCGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAAAAGTCCGGTATAGTTATCAGAATTATAAATCAGATGcc > 1:928592/1‑140 (MQ=255) cGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCa < 2:1967015/140‑1 (MQ=255) gagaGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACt < 2:1581513/140‑1 (MQ=255) gagaGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACt < 2:1364550/140‑1 (MQ=255) agagGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTg < 1:2331159/140‑1 (MQ=255) agGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGcc < 2:237222/140‑1 (MQ=255) ggTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGCCATATTTCTCATAAGTATAAATCAGATGCCACTGccc > 1:1138870/1‑140 (MQ=255) gTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGcccc < 1:300510/140‑1 (MQ=255) aCAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑tttt < 2:2345801/140‑1 (MQ=255) aGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTgg < 1:109932/140‑1 (MQ=255) aTGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTg < 1:22222/140‑1 (MQ=255) aataCTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGga < 1:1678963/140‑1 (MQ=255) cTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGc < 1:1634646/140‑1 (MQ=255) tCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCgg < 2:2385341/140‑1 (MQ=255) cTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGACGCCACTGGCCCTTA‑CTTTGGTGAAACCGGAGAGCggg > 1:698507/1‑140 (MQ=255) ttttAGCAGCCCTGGCATGTTTTACCGTACACGCACA‑G‑CGCC‑CCC‑TCATAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGAt < 2:698507/140‑1 (MQ=255) tttAGCAGCCCTGGCAAGTTTTCCCGTACACGCACG‑GCC‑CC‑CCC‑TCACTGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATa < 2:928592/140‑1 (MQ=255) agcagcCCTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACt > 2:2098097/1‑140 (MQ=255) cccTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTATTTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTg > 2:1823549/1‑140 (MQ=255) cccTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTgc > 1:296214/1‑140 (MQ=255) ccTGGCAAGTTTTACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTgcg < 1:171569/140‑1 (MQ=255) ttttACCGTACACGCACT‑GCC‑CC‑CCC‑TCACAGACCATAGAACAAACAGCCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGAATTCaa < 2:905048/140‑1 (MQ=255) ttttACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACTGGAGAGCGGGCGATAACTTCTGCGCGTATTCaa > 2:391561/1‑140 (MQ=255) ttttACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCaa > 2:2176860/1‑140 (MQ=255) ttACCGTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACa > 2:1965584/1‑140 (MQ=255) gTACACGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGgcgc > 1:1342919/1‑140 (MQ=255) cacGCACA‑GCC‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTa > 2:540607/1‑140 (MQ=255) cacGCACA‑G‑C‑CC‑CCCATCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTa > 1:20607/1‑140 (MQ=255) | ATCATCATGCAGAGCCGGAAGCTCTTAAAAGAACAACTCATCTATATCCGGGATAAACGCAACGGAGAGGTGAAAAACAGATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACA‑G‑C‑CC‑CCC‑TCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTA‑TTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTG > NC_000913/3157570‑3157841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |