BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,668,544	(C)_6→7	coding (645/1398 nt)	ccp ←	cytochrome c peroxidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,668,538	1	.	C	96.9%	556.8 / 7.0	164	coding (651/1398 nt)	ccp	cytochrome c peroxidase
Reads supporting (aligned to +/- strand): ref base . (3/2); new base C (99/58); total (103/61)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 171 total aligned reads displayed.

GTCCACCAGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑G‑C‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCAC  >  NC_000913/3668399‑3668672

gTCCACCAGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑g                                                                                                                                            <  2:2279977/140‑1 (MQ=255)

           tGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑G‑c‑ccc‑cccgcat                                                                                                                              >  1:623877/1‑135 (MQ=255)

             aTCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGGGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTc                                                                                                                            >  1:21522/1‑140 (MQ=255)

                   cAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCa                                                                                                                      >  1:1252920/1‑140 (MQ=255)

                   cAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑G‑c‑ccc‑ccc                                                                                                                                  <  2:1309555/128‑2 (MQ=255)

                   cAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑G‑c‑ccc‑ccc                                                                                                                                  >  1:1309555/1‑127 (MQ=255)

                     aTGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGAGGTTTTTCAGCCATAGAA‑GCC‑CCC‑CC‑GCATTCAACGCATg                                                                                                                    >  2:984756/1‑140 (MQ=255)

                        ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCCATCGATGTATTTATACACTCGAC‑G‑CTCCC‑CA‑ACATTCAAGGCATGGCa                                                                                                                 >  2:1137176/1‑140 (MQ=255)

                        ttGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCa                                                                                                                 >  2:2281000/1‑140 (MQ=255)

                                cGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAgcgc                                                                                                         >  1:1879501/1‑140 (MQ=255)

                                  aCCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCAt                                                                                                       >  2:331282/1‑140 (MQ=255)

                                      tCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGaaa                                                                                                   <  1:219278/140‑1 (MQ=255)

                                       cccAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAAt                                                                                                  <  1:2386935/140‑1 (MQ=255)

                                       cccAGAACTGCTCAACGTTAAATACTAAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTACCATCGAC‑GCC‑CCC‑CC‑ACATTCAACACATGGCAATGAGCGCATGAAAt                                                                                                  >  2:924416/1‑140 (MQ=255)

                                        ccAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATg                                                                                                 <  1:2446427/140‑1 (MQ=255)

                                            aaCTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑G‑C‑CCC‑CCGGCATTCATCGCGTGACAATGAGCGCATGAAATGGTGc                                                                                             >  1:700863/1‑140 (MQ=255)

                                               tGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTAt                                                                                          <  1:1566547/140‑1 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGACGG‑C‑CCC‑CC‑GCATTCGACGTATGGCAATCAGCGTATGAAATGGTGCTATCa                                                                                        >  2:727695/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTAt                                                                                          >  2:127551/1‑138 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTAt                                                                                          <  1:127551/138‑1 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:424561/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:461608/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:25801/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:383568/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:310201/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:1222826/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:1763027/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  1:1660394/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:1684508/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:237200/1‑140 (MQ=255)

                                                 cTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCa                                                                                        >  2:251961/1‑140 (MQ=255)

                                                  tCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAg                                                                                       <  2:1763027/140‑1 (MQ=255)

                                                      cGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGa                                                                                   <  2:623877/140‑1 (MQ=255)

                                                         tAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATaa                                                                                >  2:1732346/1‑140 (MQ=255)

                                                           aaTACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGCCAATGAGCGCACGAAATGGTGCTATCAGCCGATAAAc                                                                              >  1:1057569/1‑140 (MQ=255)

                                                              gacaggTTAAATACCCTCGGCGTGTGAATTGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:705772/135‑1 (MQ=255)

                                                              aCTGAGTTAAATCCCGTCGGTGCGTTACTCGGCCCAACTGCGCCTCCAACACCAATCGATGTTTTTGTGCCATCGAC‑GCC‑CCC‑CC‑GCATACACGTCATGGCAACGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:592382/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:59777/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:1252920/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:1684508/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:1553549/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:1911545/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:2206257/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:1479506/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:2281000/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCGTCGGCGCGTTAATCGACCCGACTACGCCACCACCACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:700863/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCCTCGGCGCGTTAATGGGCCCAAATGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:921188/140‑1 (MQ=255)

                                                              aCTGAGTTAAATACCATCGGCGAGTCAATAGGCCCAATTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:1137176/140‑1 (MQ=255)

                                                                tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa                                                                         >  1:1345986/1‑140 (MQ=255)

                                                                tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa                                                                         <  2:444312/140‑1 (MQ=255)

                                                                tGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACAACAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGa                                                                         >  1:1405285/1‑140 (MQ=255)

                                                                 gAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           >  2:2464883/1‑137 (MQ=255)

                                                                 gAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:2464883/137‑1 (MQ=255)

                                                                 gAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGAt                                                                        >  2:1548960/1‑140 (MQ=255)

                                                                 gAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGAt                                                                        >  2:348552/1‑140 (MQ=255)

                                                                 gAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATCGTGCTATCAGCCGATAAACGGGGAt                                                                        >  1:1091728/1‑140 (MQ=255)

                                                                  aGTTAAATACCGTCGGCGCGTTATTCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:2166355/136‑1 (MQ=255)

                                                                   gTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCg                                                                      >  1:337216/1‑140 (MQ=255)

                                                                    ttAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  2:2083754/134‑1 (MQ=255)

                                                                       aaTACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGAt                                                                  >  1:1576841/1‑140 (MQ=255)

                                                                            cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           <  1:1459334/126‑1 (MQ=255)

                                                                            cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACggg                                                                           >  2:1459334/1‑126 (MQ=255)

                                                                            cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgc                                                             >  1:2426127/1‑140 (MQ=255)

                                                                            cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgc                                                             >  1:1985911/1‑140 (MQ=255)

                                                                            cGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTAGCAGGCGTTAAACGGGGATCGTGATACAgc                                                             >  1:811929/1‑140 (MQ=255)

                                                                             gTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAACTGGGGCTGTCAGCCGACAAACGGGGATCGTGATACAgcg                                                            >  2:906635/1‑140 (MQ=255)

                                                                              tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGGGCATGAAAAGGTGCTAGCAGCCGATAAACGGGGATCGTGATAcctgtc                                                           >  2:705772/1‑135 (MQ=255)

                                                                              tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgcgc                                                           >  2:1400697/1‑140 (MQ=255)

                                                                              tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgcgc                                                           >  1:323247/1‑140 (MQ=255)

                                                                              tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgcgc                                                           >  2:1953543/1‑140 (MQ=255)

                                                                              tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAgcgc                                                           >  1:104651/1‑140 (MQ=255)

                                                                              tCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGAGCATGAAAAGGTGCTAACAGCCGATGAACGTGGATCGTGATACAgcgc                                                           >  2:799892/1‑140 (MQ=255)

                                                                                ggCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTTTCAGCCGATAAACGGGGATCGTGATACAGCGCaa                                                         >  1:2094092/1‑140 (MQ=255)

                                                                                 gcgcGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCGGATAAACGGGGATCGTGATACAGCGCaaa                                                        >  1:1183513/1‑140 (MQ=255)

                                                                                                cAACTGCGCCACCAACAACAATGGATGTTTCTCCGCCATCGAC‑G‑C‑CCCACC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACttt                                         <  2:1183513/140‑1 (MQ=255)

                                                                                                     gcgcCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTgcg                                    <  2:1576841/140‑1 (MQ=255)

                                                                                                     gcgcCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTgcg                                    <  1:1821733/140‑1 (MQ=255)

                                                                                                       gcCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCa                                  <  2:1877956/140‑1 (MQ=255)

                                                                                                        ccaccaACACCAATCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGAGCGTCATAAAGCGCAAACCCCACCGCCACTTTTTGCGCAt                                 >  2:852962/1‑140 (MQ=255)

                                                                                                          accaacaccaaTCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCg                               <  2:1580540/140‑1 (MQ=255)

                                                                                                           ccaacaccaaTCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTTATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCgg                              <  1:2057337/140‑1 (MQ=255)

                                                                                                           ccaacaccaaTCGATATTTTTCCGCTATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCgg                              <  1:945783/140‑1 (MQ=255)

                                                                                                                   aaTCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGGGCAAAACTCAACGCCAGTTTTGGCGCATCGGTAGGCAGt                      >  2:631296/1‑140 (MQ=255)

                                                                                                                   aaTCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGt                      >  2:2084927/1‑140 (MQ=255)

                                                                                                                   aaTCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGt                      >  1:624891/1‑140 (MQ=255)

                                                                                                                   aaTCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGt                      >  1:2149939/1‑140 (MQ=255)

                                                                                                                   aaTCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGt                      >  1:1852515/1‑140 (MQ=255)

                                                                                                                     tCGATGTTTTTCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGttt                    >  1:7451/1‑140 (MQ=255)

                                                                                                                            ttttCTGCCATCGACTC‑C‑CCC‑CC‑GCATTCCACGCATGACAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg             <  1:906635/140‑1 (MQ=255)

                                                                                                                            ttttCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg             >  1:2460825/1‑140 (MQ=255)

                                                                                                                            ttttCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg             <  1:1282849/140‑1 (MQ=255)

                                                                                                                            ttttCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg             <  1:595510/140‑1 (MQ=255)

                                                                                                                            ttttCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCATGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCggg             >  1:1605043/1‑140 (MQ=255)

                                                                                                                              ttCTGCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGAAAAACCCAACGCCACTTTTTGCGCACCGGTAGGCAGTTTTTGCGGGAt           >  2:1051291/1‑140 (MQ=255)

                                                                                                                                  gCCATCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGc       <  2:1985911/140‑1 (MQ=255)

                                                                                                                                  gCCATCGAC‑GCC‑CCC‑CC‑ACATTTAACGCATGGCAATGAGGGCATGAAAGGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGc       <  2:1091728/140‑1 (MQ=255)

                                                                                                                                     aTCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGc    >  2:1843031/1‑140 (MQ=255)

                                                                                                                                      tCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCa   <  2:461608/140‑1 (MQ=255)

                                                                                                                                      tCGAC‑GCC‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCa   <  1:1953543/140‑1 (MQ=255)

                                                                                                                                       cGAC‑GCC‑CCC‑CC‑GCAGTCAACGCATAGCAATGAGCGCCTGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCAc  <  1:767628/140‑1 (MQ=255)

GTCCACCAGCCTGATCCTGCAATGTTGCCGCACGACCATCCCAGAACTGCTCAACGTTAAATACTGAGTTAAATACCGTCGGCGCGTTAATCGGCCCAACTGCGCCACCAACACCAATCGATGTTTTTCTGCCATCGAC‑G‑C‑CCC‑CC‑GCATTCAACGCATGGCAATGAGCGCATGAAATGGTGCTATCAGCCGATAAACGGGGATCGTGATACAGCGCAAAACCCAACGCCACTTTTTGCGCATCGGTAGGCAGTTTTTGCGGGATGGGCTGCAC  >  NC_000913/3668399‑3668672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`