| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,474,275 | (C)6→7 | coding (152/594 nt) | bdcR → | putative transcriptional regulator BdcR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,474,269 | 1 | . | C | 91.2% | 452.8 / 29.6 | 138 | coding (146/594 nt) | bdcR | putative transcriptional regulator BdcR |
| Reads supporting (aligned to +/- strand): ref base . (4/8); new base C (62/63); total (67/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 154 total aligned reads displayed.
ACTAAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑A‑‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGCCTGG > NC_000913/4474130‑4474403 | aCTAAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAGAGGTTTCGATGTTGTCAGTGTTGCTGAAGTTACGGATTATCTTGGTATTa‑a > 2:1032740/1‑140 (MQ=255)aCTAAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGTTGTCACTATTGCTGAAGTTACTGATTATCTTGGTATTa‑a > 2:1081447/1‑140 (MQ=255)aCTAAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTa‑a < 1:1457243/140‑1 (MQ=255) tAAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTATCAGTGTTGCTGAAGTAACTGTTTATCTTGGTATTA‑A‑‑cc > 2:1125986/1‑140 (MQ=255) tAAAAAACAATCTCGCGTCCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGGTGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑A‑‑cc > 1:1499308/1‑140 (MQ=255) aaTCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCCCCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATTTTGGTATTA‑A‑‑cc‑c‑cc‑ccgag < 1:1942489/140‑5 (MQ=255) aaTCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGCATTA‑A‑‑cc‑c‑cc‑ccgag > 1:863100/1‑136 (MQ=255) tctcGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATGATGTTGGTAGTA‑AC‑CC‑C‑CC‑C‑GAGcc > 1:1140070/1‑140 (MQ=255) ctcGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTAGC‑‑CC‑C‑CC‑C‑GAGCct < 1:1774304/140‑1 (MQ=255) gcgTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTa > 1:1271532/1‑140 (MQ=255) gTTCCAGGTCGTCCCAGTCGTTTCGCTCCTGCGCACGCATTCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTAcg < 2:801572/140‑1 (MQ=255) gTTCCAGGTCGTCCCAGACGTTTCGATCCTGAGCAGGGAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCCCTAcg < 1:1177777/140‑1 (MQ=255) tcgtcCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCtttt < 2:2156590/140‑1 (MQ=255) tcgtcCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCtttt < 2:1818935/140‑1 (MQ=255) tcgtcCCAGACGTTTCGCTCCTCAGCAGGCAATCTCTGCCGCAAAAGTTCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCtttt < 2:863100/140‑1 (MQ=255) tcgtcCCAGACGTTTCGCTCCTCAGCAGGAAATCTCTTCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCtttt < 1:632654/140‑1 (MQ=255) gtcCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGGTGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTgg < 2:1499308/140‑1 (MQ=255) tcCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGc > 2:610075/1‑140 (MQ=255) tcCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTCGGTATTA‑A‑‑CC‑C‑CC‑CAGAGCCTCTACGCGGCTTTTGGc > 1:888418/1‑140 (MQ=255) cccAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AT‑CC‑C‑TC‑C‑TAGCCTCCACGCGGCTTTTGGcc > 1:801572/1‑139 (MQ=255) cccAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTAcg < 2:2256806/128‑1 (MQ=255) cccAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCa > 1:1418443/1‑140 (MQ=255) cccAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCa > 2:2109570/1‑140 (MQ=255) cAGACGTTTCGCTCCTGGGCAGGCAATCTCTTCGGCAAACGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGt < 2:888418/140‑1 (MQ=255) cAGACGTTGCGCTCCTGAGCAGACAATCTCTGCGGCAAATGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGt < 2:1140070/140‑1 (MQ=255) gACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTaa > 2:1566436/1‑140 (MQ=255) aCGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATGATCTTGGTATTA‑T‑‑CC‑CACC‑C‑GAGCCACTACACGGCTTTTGGCAGTaaa > 2:707765/1‑140 (MQ=255) cGTTTCGCGCCTGAGCAGGCAAACTCTGCGCAATACGTGCTTTTTCACGAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAg < 2:1154020/140‑1 (MQ=255) ttCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTg < 2:2427812/140‑1 (MQ=255) ttCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTg < 1:1724470/140‑1 (MQ=255) tCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTgg > 2:1502046/1‑140 (MQ=255) tCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTgg > 2:2130891/1‑140 (MQ=255) cGCTCCTGAGCAGGCAATCTCTTCGTCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTggg < 1:854044/140‑1 (MQ=255) tCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTa < 2:386683/140‑1 (MQ=255) cTGAGCAGGCAATCTCTGCGGCCAATGTGATTTTTCATCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTAtt < 1:645759/140‑1 (MQ=255) cTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTACC‑‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTAtt < 2:1846080/140‑1 (MQ=255) tGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTAttt > 1:1749188/1‑140 (MQ=255) gAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTa < 2:1608896/140‑1 (MQ=255) aGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAg > 2:1224088/1‑140 (MQ=255) cAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑ACCCC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGc < 1:1631093/140‑1 (MQ=255) gCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTa < 2:1744647/134‑1 (MQ=255) gCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCgtg > 2:370893/1‑140 (MQ=255) gCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑A‑‑CC‑C‑CCAC‑GAGCCTCGACGCGGCTTTTGGCAGCAAAGGTGGGTTATTTAGCCgtg > 2:1046889/1‑140 (MQ=255) cAATCTCTGCGGCAATAGTGCTTTTACACCAAAAAGGGTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCgtgt < 1:1046889/140‑1 (MQ=255) aaTCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTa < 2:2210765/140‑1 (MQ=255) ctctGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTc > 2:2189351/1‑140 (MQ=255) tctGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCa < 2:1631115/140‑1 (MQ=255) tGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAAt > 2:83222/1‑140 (MQ=255) cGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAACGCTGGGTTATTTAGCCgtgt > 1:1020106/1‑131 (MQ=255) cGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCgtgt < 2:1020106/131‑1 (MQ=255) cGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGa > 1:1763799/1‑140 (MQ=255) aaaaGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATAc > 2:1970285/1‑140 (MQ=255) aaaGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACg > 2:2081315/1‑140 (MQ=255) aaGTGCTTTTTCACCGAAGAGGGTTAGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGCACTCAATGAATACGt < 1:1032740/140‑1 (MQ=255) gTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTGTTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCg < 1:166996/140‑1 (MQ=255) tGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑A‑‑‑‑‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTAc < 2:2023148/140‑1 (MQ=255) ttttCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACg > 1:1864115/1‑140 (MQ=255) ttttCACCAAAAAGGATTCGATACTTTCACTGTTGCTTAAGTTACTGATTATCTTGGTATTA‑ACCCC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTAc < 1:711223/140‑1 (MQ=255) tCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTAATTAGCCGTGTACACAATAAATACGTCGGTACGGaa > 2:657499/1‑140 (MQ=255) aCCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGc > 1:202779/1‑140 (MQ=255) ccAAAAAGGTTTCGGTGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCt > 2:1529076/1‑140 (MQ=255) aGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCg < 2:1271532/140‑1 (MQ=255) gTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCt < 2:534223/140‑1 (MQ=255) gTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCt < 1:2109570/140‑1 (MQ=255) tCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGc > 1:1540669/1‑140 (MQ=255) tCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGAACTTAATGAATACGTCAGTACGCAAGCTATGCCGCTTGc > 2:1181646/1‑140 (MQ=255) aTGCTGTCAGTGTCGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGa > 2:241430/1‑140 (MQ=255) tGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGat < 2:1749188/140‑1 (MQ=255) tGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTACC‑‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATAtt < 2:374762/140‑1 (MQ=255) tgtTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGt < 1:2359933/140‑1 (MQ=255) gtTGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGtg > 1:229934/1‑140 (MQ=255) ttGCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTGTTACGCTTGACGATATTCTTCGtga > 1:1172676/1‑140 (MQ=255) gCTGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGtgatg > 1:2473832/1‑140 (MQ=255) tGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTgatgat > 2:1589533/1‑140 (MQ=255) tGAAGTTACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTgatgat < 1:2015013/140‑1 (MQ=255) tGAAGTTACTGATTAGCTTGGTATTA‑A‑‑CCTC‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTgatgat < 1:1112451/140‑1 (MQ=255) tACTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCg > 2:1640542/1‑140 (MQ=255) aCTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCgg > 1:1558184/1‑140 (MQ=255) aCTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCgg < 1:1628360/140‑1 (MQ=255) aCTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCgg > 1:2230346/1‑140 (MQ=255) aCTGATTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCgg < 1:2189351/140‑1 (MQ=255) aTTATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAgg < 2:1558184/140‑1 (MQ=255) ttATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGc < 2:93056/140‑1 (MQ=255) ttATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGc < 1:228973/140‑1 (MQ=255) tATCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCg > 1:1248574/1‑140 (MQ=255) aTCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCAGCTAGCCGATATTCTTAGTGAGGATCGTCCGGTAGGCGa > 2:712658/1‑140 (MQ=255) tCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAg > 1:2395917/1‑140 (MQ=255) tCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAg > 1:2142299/1‑140 (MQ=255) tCTTGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAg > 1:1657794/1‑140 (MQ=255) ttGGTATTACC‑‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTg < 2:2264045/140‑1 (MQ=255) tGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGc > 2:1101655/1‑140 (MQ=255) tGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGc < 1:386630/140‑1 (MQ=255) tGGTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGc > 1:1709053/1‑140 (MQ=255) gTATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGCCt > 1:41293/1‑140 (MQ=255) tATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGTTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTAGTGATGGTCGTCCGGTAGGCGAGTGCCTg > 1:699999/1‑140 (MQ=255) tATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGGTATTCTTAGTGCTGATCGTCCAGTAGGCGAGTGCCTg > 1:1026564/1‑140 (MQ=255) tATTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGCCTg > 1:1811232/1‑140 (MQ=255) aTTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGCCTgg > 1:2131165/1‑140 (MQ=255) aTTA‑AC‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGCCTgg > 2:1952231/1‑140 (MQ=255) aTTA‑AC‑CC‑C‑CC‑C‑GAGCCCCTACCCGGCTTTTCGCAATAATGCTGGGTTTTTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGCCTgg < 2:660511/140‑1 (MQ=255) | ACTAAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTA‑A‑‑CC‑C‑CC‑C‑GAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGCCTGG > NC_000913/4474130‑4474403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |