| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 218,835 | (A)8→9 | intergenic (‑60/+52) | proS ← / ← trmO | proline‑‑tRNA ligase/tRNA m(6)t(6)A37 methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 218,827 | 1 | . | A | 94.3% | 292.0 / 8.0 | 88 | intergenic (‑52/+60) | proS/trmO | proline‑‑tRNA ligase/tRNA m(6)t(6)A37 methyltransferase |
| Reads supporting (aligned to +/- strand): ref base . (2/3); new base A (45/38); total (47/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
GCGCGCAGCATCAGCTGATGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATCATGTAGCCAG > NC_000913/218690‑218962 | gcgcgcAGCATCAGCTGTTGGCGGATCACCTTGGCCTCGACAGGTGTCCCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑a < 2:720073/140‑1 (MQ=255) cgcgcAGCATCAGCTGATGGCTGATCACCTCGGCGTCGGCGGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa > 1:537359/1‑140 (MQ=255) cgcAGCATCAGCTGATGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa‑a‑a > 2:433706/1‑140 (MQ=255) cagcaTCAGCTGATGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCCAGGCGATCCTGGGAC‑‑a‑aa‑a‑aaa > 1:1063557/1‑140 (MQ=255) cagcaTCAGCTGATGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa‑a‑aaa > 1:549828/1‑140 (MQ=255) agcaTCAGCTGATGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa‑a‑aaaa > 2:2145565/1‑140 (MQ=255) tCAGCTGATGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa‑a‑aaaaagtg > 1:391166/1‑136 (MQ=255) cAGCTGATGGCTGATCACCTCGGCGTCGGCGGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa‑a‑aaaaagtga < 2:537359/140‑6 (MQ=255) cAGCTGATGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa‑a‑aaaaagtga < 1:2040148/140‑6 (MQ=255) cAGCTGATGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa‑a‑aaaaagtga < 2:514225/140‑6 (MQ=255) tGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGtt > 1:2306175/1‑140 (MQ=255) tGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGtt > 1:1325174/1‑140 (MQ=255) tGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa‑a‑aaaaagtga < 1:1660851/133‑6 (MQ=255) ggCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa‑a‑aaaaagtga > 1:302502/1‑127 (MQ=255) ggCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑a‑aa‑a‑aaaaagtga < 2:302502/132‑6 (MQ=255) gCTGATCACCTCGGCGTGGGCACGTGTCTCCTTGACAGTAGAGAGCAGCTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑A‑AA‑A‑AAAAGTGATTTAGTTTAc < 2:744088/140‑1 (MQ=255) cTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTAc < 1:1956082/140‑1 (MQ=255) cTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTAc < 2:495244/140‑1 (MQ=255) cTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTAc < 2:549828/140‑1 (MQ=255) cTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCGTGGGAC‑‑ACAA‑A‑TAACGTGATTCAGTTTACCAGTGCaa > 1:1167150/1‑140 (MQ=255) ggCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGCGAC‑‑A‑AA‑ATAAAGGTTATTTAGATTACCAGTGCAAAAg > 1:657214/1‑140 (MQ=255) gCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGa < 2:1325174/140‑1 (MQ=255) cGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGa > 1:1702775/1‑139 (MQ=255) cGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGa < 2:1702775/139‑1 (MQ=255) gTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGaaa < 2:2487966/140‑1 (MQ=255) cAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCa < 1:1603046/140‑1 (MQ=255) ctcCTTGAGAGTGGAGATCAGGCATTGGCTATTACTCATCTTGTTACGTTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAgaga < 2:712991/140‑1 (MQ=255) cTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAgg > 1:2339901/1‑140 (MQ=255) ttGAGAGTGGAGAGCAGGTATTGGCTAGTACGTATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAggg < 1:2145565/140‑1 (MQ=255) gagTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGaa > 2:407846/1‑133 (MQ=255) gagTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGaa < 1:407846/133‑1 (MQ=255) tGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAgaga < 1:26875/129‑1 (MQ=255) tGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAgaga > 2:26875/1‑129 (MQ=255) tGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAAt > 2:1754600/1‑140 (MQ=255) gagaGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACAAA‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAAtt > 1:352271/1‑140 (MQ=255) gagaGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCCGTGCAAAAGAAGTGGCAAAAGCGAAGGGCGTGAAttt > 1:830846/1‑140 (MQ=255) gagaGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAAttt > 2:2466148/1‑140 (MQ=255) gagaGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAAttt > 1:1229011/1‑140 (MQ=255) aTTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTc < 2:1912138/140‑1 (MQ=255) aGTACGCATGTTGTTACGGTTCCAGTTGGAATGTATAACGGGCTCAAGCCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCa < 2:830846/140‑1 (MQ=255) aGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCa < 1:433706/140‑1 (MQ=255) aGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCa > 1:43612/1‑140 (MQ=255) gTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCaa < 2:2339901/140‑1 (MQ=255) tACGCATGTTGTTACGTTTCCAGTTGGAAGGGAGAGCAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCaaa < 2:1063557/140‑1 (MQ=255) tACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAGAGAGAAGAGCGTGACTTTAACACGGTTCCAGCGCaaa > 1:1191057/1‑140 (MQ=255) tACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCaaa > 2:413217/1‑140 (MQ=255) tACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCa > 2:1582043/1‑138 (MQ=255) tACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCa < 1:1582043/138‑1 (MQ=255) aCGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAg < 2:43612/140‑1 (MQ=255) aCGCATGTTGTTACGGTTCCAGCTGGAAGGTCGAACAGGTTCAAGGCGCGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAg < 2:657214/140‑1 (MQ=255) cGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGa > 1:2375040/1‑140 (MQ=255) aTGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACtt > 2:366525/1‑140 (MQ=255) aTGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACtt > 1:2089378/1‑140 (MQ=255) aTGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACtt > 2:1290119/1‑140 (MQ=255) tgttgtTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAAAAGAGCGTGAATTTAAAGCGGATCCAGCGCAAAGACTTc > 2:1041310/1‑140 (MQ=255) tgttACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCaaa < 2:2089378/140‑1 (MQ=255) gttACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCaaa > 2:909220/1‑130 (MQ=255) gttACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCaaa < 1:909220/130‑1 (MQ=255) tACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAAcc < 2:1617885/140‑1 (MQ=255) ttCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGt > 1:1562457/1‑140 (MQ=255) ttCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGt > 1:2277013/1‑140 (MQ=255) ccAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGt < 2:1598515/138‑1 (MQ=255) ccAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGt > 1:1598515/1‑138 (MQ=255) ccAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCg > 1:117854/1‑140 (MQ=255) ccAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTGCCAACGCAAAGACTTCAAAACCTGCGTCg > 1:1125250/1‑140 (MQ=255) ttGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGa < 1:366525/140‑1 (MQ=255) gAAGGTAGAACAGGCGCAAGGCTAGGCTGCGAC‑‑A‑AA‑AGAAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGAcgc < 1:717696/140‑1 (MQ=255) aaGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGAcgcg > 2:76913/1‑140 (MQ=255) aaGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGAcgcg > 2:2157282/1‑140 (MQ=255) aaGGTAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGAGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGAcgcg > 2:1578460/1‑140 (MQ=255) tAGAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAg > 1:2191483/1‑140 (MQ=255) gAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCg < 2:147329/140‑1 (MQ=255) gAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCg < 1:76913/140‑1 (MQ=255) gAACAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCg < 2:487870/140‑1 (MQ=255) aaCAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGa < 2:1229011/140‑1 (MQ=255) aaCAGGCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGa < 1:413217/140‑1 (MQ=255) ggCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACg > 2:2023042/1‑139 (MQ=255) ggCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACg < 1:2023042/139‑1 (MQ=255) gCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCg > 2:1716716/1‑134 (MQ=255) gCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCg < 1:1716716/134‑1 (MQ=255) gCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGtt > 1:246011/1‑140 (MQ=255) gCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCACCAGCGAACGtt > 2:1958157/1‑140 (MQ=255) gCTCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAAAGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGtt > 1:581957/1‑140 (MQ=255) tCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGGCTTGAAAACCTGCGTCCGTGAGGCGCCAGCGAACGTTaa > 2:637435/1‑140 (MQ=255) tCAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACGTCAAAACGTGCATCAGTGACGTGCCAGCGAACGTTaa > 1:1081615/1‑140 (MQ=255) taaGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTaaa < 2:222288/139‑1 (MQ=255) cAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTaaa < 1:2157282/140‑1 (MQ=255) cAAGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTaaa < 2:2375040/140‑1 (MQ=255) aGGCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAAt > 2:42115/1‑140 (MQ=255) ggCGAGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATc < 2:1763424/140‑1 (MQ=255) ggCGAGCCTGGGAC‑‑A‑AACA‑AAATGTGATTTATTTTTCCACTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATc < 2:715330/140‑1 (MQ=255) gCGAGCCTTGGAC‑‑A‑AACT‑AAAAGTGATTTACTTCACCAGCGCAAAAGACATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATCa < 2:1191057/140‑1 (MQ=255) aGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATCATGt > 1:54299/1‑140 (MQ=255) aGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATCATGt > 1:1461211/1‑140 (MQ=255) aGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATCATGt > 2:1792910/1‑140 (MQ=255) aGCCTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGGGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACATGCGTCGTTGATGCTCCAGCGTACGTTAAAATCATGt > 1:1153485/1‑140 (MQ=255) ccTGGGACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATCATGTAg > 1:2475384/1‑140 (MQ=255) gggACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATCATGTAGCCa < 1:1754600/140‑1 (MQ=255) gggACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTG‑ATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATCATGTAGCCAg < 2:2306175/140‑1 (MQ=255) gggACA‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAAAGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATCATGTAGCCa < 2:581957/140‑1 (MQ=255) | GCGCGCAGCATCAGCTGATGGCTGATCACCTCGGCGTCGGCAGGTGTCTCCTTGAGAGTGGAGAGCAGGTATTGGCTAGTACGCATGTTGTTACGGTTCCAGTTGGAAGGTAGAACAGGCTCAAGGCGAGCCTGGGAC‑‑A‑AA‑A‑AAAAGTGATTTAGTTTACCAGTGCAAAAGAAATGTCAAAAGAGAAGGGCGTGAATTTAACGCGGTTCCAGCGCAAAGACTTCAAAACCTGCGTCGGTGACGCGCCAGCGAACGTTAAAATCATGTAGCCAG > NC_000913/218690‑218962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |