| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,221,495 | (G)5→6 | pseudogene (1895/2648 nt) | ycgH → | putative transporter component, N‑terminal fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,221,490 | 1 | . | G | 95.5% | 227.1 / 2.0 | 67 | pseudogene (1890/2648 nt) | ycgH | putative transporter component, N‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base . (3/0); new base G (30/34); total (33/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAAACGCGCTACATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑A‑GGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATCGTTCGAAAGGGAGTGTCAGA > NC_000913/1221353‑1221622 | gAAACGCGCTACATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑A‑gg < 1:501109/140‑1 (MQ=255) gcgcTACATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑A‑gggg‑ggc < 1:1683324/140‑3 (MQ=255) gcgcTACATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAATT‑A‑gggg‑ggc < 2:382561/140‑3 (MQ=255) cgcTACATCGATCCTGTAACTGAACCGGACCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑A‑gggg‑ggcg < 1:756782/140‑4 (MQ=255) cgcTACATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑A‑gggg‑ggcg < 2:1947462/140‑4 (MQ=255) cTACATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑A‑gggg‑ggcgat < 1:2344659/140‑6 (MQ=255) cTACATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑A‑gggg‑ggcgat < 1:2048521/140‑6 (MQ=255) cATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCCGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTg > 2:2067946/1‑140 (MQ=255) tCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAAcc > 2:612432/1‑140 (MQ=255) tCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑A‑gg > 1:1997982/1‑123 (MQ=255) tCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑A‑gg < 2:1997982/123‑1 (MQ=255) cTGTAACTGAACAGGCGCGTTCTAGCCGACTTTGGCTCCGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCgg < 1:709539/140‑1 (MQ=255) cTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCgg < 1:1421151/140‑1 (MQ=255) gTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGAGCTCGCATCTCTAAGTCTCGCAGTTAA‑GGGG‑ACGATCTGTTAACCggtg > 2:982910/1‑140 (MQ=255) gTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCggtg < 1:1733029/140‑1 (MQ=255) gTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCggtg > 1:1582179/1‑140 (MQ=255) gTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCggtg > 2:1315585/1‑140 (MQ=255) tAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTGCGTCTCGAAGTC‑AGGGGG‑GCGATCTGTTAACCggtgg > 1:883941/1‑140 (MQ=255) tAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCggtgg > 2:2096592/1‑140 (MQ=255) cTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GTGATCTGTTAACCGGTGGttt < 2:1656052/140‑1 (MQ=255) gAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTa > 1:2032777/1‑140 (MQ=255) aaCAGGAGCGTTCAAGCCGAC‑TAGGCTACGTAAAATTGGTGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTAcc < 2:846387/140‑1 (MQ=255) aCAGGAGCGTTCAAGTCGACTTCGGATACTTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTAcc < 1:1146326/140‑1 (MQ=255) aCAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTAcc < 2:2032777/140‑1 (MQ=255) aCAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTAcc > 1:144570/1‑140 (MQ=255) aCAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTAcc < 1:93811/140‑1 (MQ=255) aCAGGAGCGTTCAAGCCGACTTTGGATACCTCAAATTAGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAGCCGGTGGTTTTAcc < 1:1216604/140‑1 (MQ=255) aGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGa < 2:1582179/140‑1 (MQ=255) aGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGa < 1:1294476/140‑1 (MQ=255) ggAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGa > 1:1872730/1‑139 (MQ=255) ggAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGa < 2:1872730/139‑1 (MQ=255) ggAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCCACGTCTCGTAGTT‑AGGGGG‑GCGATCCGTTAACCGGTGGTTTTACCGAt > 2:996397/1‑140 (MQ=255) aGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTAGGTCTCGCAATT‑A‑GGGGCGCGATCTGATAACCGGTGGTTTTACCGATAg > 2:880589/1‑140 (MQ=255) gCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTGCCGATAGt < 2:2375773/140‑1 (MQ=255) cGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTg > 2:2444738/1‑140 (MQ=255) gTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGa < 1:1315585/140‑1 (MQ=255) ttCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTAcc < 1:256876/131‑1 (MQ=255) ttCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTAcc > 2:256876/1‑131 (MQ=255) ttCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGAc > 1:417461/1‑140 (MQ=255) ttCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGAc > 1:1968391/1‑140 (MQ=255) ttCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCACGCAGTTAA‑GGGG‑GGGCGCTGTTAGCCGGTGGGTTTACCGATAGTGAc > 2:1216604/1‑140 (MQ=255) gCCGACTTTGGCTACGTGAAATTGGCGGGCATAATCCCTTGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTg < 2:1011888/140‑1 (MQ=255) gCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTg < 1:1958918/140‑1 (MQ=255) ttGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTg < 1:1436280/140‑1 (MQ=255) tGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTgg < 2:2469458/140‑1 (MQ=255) gCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTATTAGCGCTAGTGATAGTTGGCGTTTGGGa > 1:1138417/1‑140 (MQ=255) aCGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTg < 2:1934534/140‑1 (MQ=255) aCGTCAAATTGGCGGGCATAATCCCTGGCGTTACATCAAGGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTg < 2:710542/140‑1 (MQ=255) cGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGGTTTACCGATAGTGACGGGTGGGGTTTGGTAGTGa > 2:2306790/1‑140 (MQ=255) cAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATgg < 1:377188/140‑1 (MQ=255) cAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATgg < 2:144570/140‑1 (MQ=255) cGGGCATTATGCCTGGGGTGACAGCAACGGAGAGGTGAGAACGACCTTGCCTCGCTACGGCTCGGAGTT‑AGGGGG‑GCAATCCGTTAACCGGTGGCTTTACCGATCGTGACAGTTGGCGTTTGGGAGTTATGGCTGGCTAt > 2:2224635/1‑140 (MQ=255) cGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTAt > 1:1341047/1‑140 (MQ=255) gCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGcc < 2:1235203/140‑1 (MQ=255) cATAATGCCTGGCGTGACAGCAACGGACATTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGccc < 1:880589/140‑1 (MQ=255) cATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGccc < 1:2306790/140‑1 (MQ=255) tAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCcgc < 1:612432/140‑1 (MQ=255) ccTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTa < 1:311045/140‑1 (MQ=255) tGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACa > 2:2445194/1‑140 (MQ=255) ggCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACaa > 1:322314/1‑140 (MQ=255) gCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGGGACAGTTGGCGTTTGGGAGTGATGGGTGGTTATGCCCGCGACTACAAc > 2:784673/1‑140 (MQ=255) cGTGACAGCAACGGACGGTTGAGAACGACCACGCACCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCAACTACAACt < 2:1138417/140‑1 (MQ=255) aCAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATAGCTCGTGATGCCCCCGACTACAACTTAAc > 1:832684/1‑140 (MQ=255) ggACAGTTGAGAACGACCTCGCTTCGCTACGACTCACAGGT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGGTAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCa < 2:696724/140‑1 (MQ=255) gTTGAGAACGACCTCGCATCGCTACTTCTGGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCgtg < 1:950599/140‑1 (MQ=255) ttGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCgtgt > 1:2290290/1‑140 (MQ=255) tGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTc > 2:243561/1‑140 (MQ=255) agaACGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCgg > 1:1443152/1‑140 (MQ=255) aaCGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGAt > 1:276732/1‑140 (MQ=255) aaCGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATAGCTGGTTAAGCCAGCGGCTACAACTAAACTGATTCCAGCGTGTCGGAt > 2:677705/1‑140 (MQ=255) cGACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTa < 2:2290290/140‑1 (MQ=255) gACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTAt > 1:2012306/1‑140 (MQ=255) gACCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCAGGTTATGCTCGCTACTACAACTTAACTCATTCCAGCGTGTCGGATTAt > 2:950599/1‑140 (MQ=255) acttCGCATCGCTACGCCTCGAAGTT‑AGGGGG‑GCGAACTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGCCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATc < 2:1973775/137‑1 (MQ=255) aCCTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATc < 1:2067946/140‑1 (MQ=255) ccTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTATCTCATTCCATCGTGTCGGATTATCg > 1:1054041/1‑140 (MQ=255) ccTCGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATCg > 1:1467076/1‑140 (MQ=255) cGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATCGTTc > 1:290213/1‑140 (MQ=255) cGCATCGCTACGTCTCGCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATCGTTc > 2:1764022/1‑140 (MQ=255) gCAGTT‑AGGGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATCGTTCGAAAGGGAGTGTCaga < 2:1467076/140‑1 (MQ=255) | GAAACGCGCTACATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTT‑A‑GGGG‑GCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATCGTTCGAAAGGGAGTGTCAGA > NC_000913/1221353‑1221622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |