Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913646,7470TG23.4% 170.7 / 21.3 77T255P (ACC→CCC) citGtriphosphoribosyl‑dephospho‑CoA synthase
Reads supporting (aligned to +/- strand):  ref base T (1/58);  new base G (18/0);  total (19/58)
Fisher's exact test for biased strand distribution p-value = 1.16e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 108 total aligned reads displayed.

ATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCA  >  NC_000913/646614‑646886
                                                                                                                                      |                                                                                                                                             
aTCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AAt                                                                                                                                        >  1:2340092/1‑140 (MQ=255)
       gCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTATCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGG‑ATTGccccc                                                                                                                                  >  2:868737/1‑140 (MQ=255)
        cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGC‑AATGcccatt                                                                                                                                 >  1:566593/1‑137 (MQ=255)
        cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCtt                                                                                                                                >  1:2338415/1‑140 (MQ=255)
        cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTG‑AATGgccccct                                                                                                                                >  2:304618/1‑138 (MQ=255)
         ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCttt                                                                                                                               <  2:1282468/140‑1 (MQ=255)
         ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCttt                                                                                                                               <  2:627564/140‑1 (MQ=255)
         ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCttt                                                                                                                               <  2:1979990/140‑1 (MQ=255)
                atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑GATGCCCCCctttttttat                                                                                                                        >  2:1771557/1‑135 (MQ=255)
                 ttAAATCTGTGCTAAAACCCAGTTAAGGATCAGTAGGTCGGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCaata                                                                                                                       <  2:877769/140‑1 (MQ=255)
                 ttAAATCTGTGCTAAAAACCAGCTAAGGATCAGTAGGTCAGCACTGCCACCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCaata                                                                                                                       <  2:1036670/140‑1 (MQ=255)
                  tAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTG‑CATGGCCCCCTTTTTCaataa                                                                                                                      >  1:2039079/1‑140 (MQ=255)
                         gtgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGT‑GGGGGGTTG‑AACGCCCCCCTTTTTTAATAATGttttc                                                                                                               >  1:1002940/1‑138 (MQ=255)
                         gtgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTgc                                                                                                               <  1:1341563/140‑1 (MQ=255)
                         gtgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTG‑GATGCCCCCCTTTTTCtataaatttttt                                                                                                               >  2:320913/1‑133 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTG‑AATGCCCCCCTTTTTCAATAATGttttcc                                                                                                              >  1:1405097/1‑137 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑GATGCCCCCCTTTTTCCATAATTTTTtcg                                                                                                              >  2:226684/1‑140 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATGCCCCCCTTTTTTCATAAAGtttttt                                                                                                              >  2:2419427/1‑137 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATGCCCCCCTTTTTGAATGAAGttttgg                                                                                                              >  1:1802323/1‑137 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATGCCCCCCTTTTTCAATAATGTTTgcg                                                                                                              >  2:2244741/1‑140 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑AGGGGGTCG‑GAAACCACCTTTTATCAATAATGTTTtcg                                                                                                              >  1:693139/1‑140 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACAATCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATGCCCCCCTTTTTCAATAATGTTTtcg                                                                                                              >  1:1941059/1‑140 (MQ=255)
                           gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTG‑AATGCCCCCCTTTTTCAATAATGTTTtcgc                                                                                                             >  2:72854/1‑140 (MQ=255)
                           gCTAAAAACCAGGTAAGGATC‑‑‑AGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGCTGG‑CAAACCCCCCTTTTTCCATAAATTTTGCGCCTc                                                                                                          >  2:1765344/1‑140 (MQ=255)
                              aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                          <  2:1433386/140‑1 (MQ=255)
                              aaaaaCCAGGTAAGGACAAGTATGTCAGCACTGTCACCTTGACTGAGAATTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                          <  2:1113711/140‑1 (MQ=255)
                               aaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATTCCCCCCTTTTTTAATAATTTTTTTGCCTcc                                                                                                         >  2:186018/1‑139 (MQ=255)
                                      ggTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTG‑AACTTCCCCCTTTTGCAATAATGTTTTTGCTTCCCGCtttt                                                                                                  >  2:1980874/1‑137 (MQ=255)
                                       gTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AACGCCACCTCTTTGCAATGAAGTGTTCGCCTCGCGCTGTAg                                                                                                 >  2:866922/1‑140 (MQ=255)
                                       gTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTGCGTACTGCACCTTTTTTCCAAAAATTATTG‑GCCTCccgcctgac                                                                                                 >  2:739469/1‑135 (MQ=255)
                                       gTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTG‑GATGCCCCCCTTTTTCTATAAATTTTTCGCCTCCCGCCGttg                                                                                                 >  2:1257130/1‑138 (MQ=255)
                                        tAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGc                                                                                                <  2:2338415/140‑1 (MQ=255)
                                                aGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑GATGGCCCCCTTTTTCAATAAAGTTTTCGCCCCCCCCCGTTGCCCgcgccg                                                                                        >  2:1855712/1‑138 (MQ=255)
                                                 gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAgg                                                                                       <  1:226684/140‑1 (MQ=255)
                                                 gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATGCCCCCCTTTTTCCATAATGTTTTCGCCTCCCGCTGTAGCCAGCGCAgg                                                                                       >  1:1740284/1‑140 (MQ=255)
                                                 gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGATCT‑CATGCCCCCCTTATGCCATAGTATTTGCGTCTCGGGCTGGAGCCAgcgcccg                                                                                       >  2:735613/1‑137 (MQ=255)
                                                 gTAGGTCAGCACTGCCGCCTGGACTAAGATTTCGTTCCATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAgg                                                                                       <  1:962704/140‑1 (MQ=255)
                                                  tAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTG‑AATGCCCCCCTTTTTTAATAATGTTTTCGCCTCGCGCTGTAGCCAGCGCAGGc                                                                                      >  1:2007988/1‑140 (MQ=255)
                                                  tAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑GATGCCCCCCTTTTGCAATAAAGTTTTCGCCTCGCCCTGTAGCCAGCGCAGGc                                                                                      >  1:2121384/1‑140 (MQ=255)
                                                   agctCAGCTCTGCCGCCTGGACTGAGATTTCGTTCGATACACTCTCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCACCTTCTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAggac                                                                                     <  2:1597329/137‑3 (MQ=255)
                                                   acagcAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGcc                                                                                     <  1:1405376/136‑1 (MQ=255)
                                                   aGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGcc                                                                                     <  2:6146/140‑1 (MQ=255)
                                                   aGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGcc                                                                                     <  1:1855712/140‑1 (MQ=255)
                                                     gTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATGCCCCCCTTTTTCAATAATGTTTTCGCCTCGCGCTGTAGCCCGCGCAGGgccc                                                                                   >  1:2254849/1‑140 (MQ=255)
                                                     gTCAGCACTGCCGCCGGGACTGTGACTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGcccc                                                                                   <  1:1008208/140‑1 (MQ=255)
                                                      tCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTGG‑AATGCCCCCCCTTTTTTATAATGTTTTTTCCCCCCGCTGGTGCCACCGCAGGccccc                                                                                  >  2:245301/1‑140 (MQ=255)
                                                       cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑GATGGCCCCCTTTTTCAATAATGTTTTCGCCTCCCGCTGTTGCCAGCGCCGGcccccc                                                                                 >  2:2150949/1‑140 (MQ=255)
                                                          cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATGCCCCCCTTTTTCAATAATGTTTTCGCCTCCCGCCGTAGCCAGCGCAGGgcccccccc                                                                              >  1:1399819/1‑137 (MQ=255)
                                                            cTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTG‑AATGCCCCCCTTTTTTAATAATGTTTTCGCCCCGCGCTGTAGGCCGCGCCGGccccccccccc                                                                            >  1:1775153/1‑135 (MQ=255)
                                                               ccgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATGCCCCCCTTTTTCAATAATGTTTTTGCCCCCCGCCGTAGCCCGCGCCGGCCCCCCCCGCcccc                                                                         >  2:1511546/1‑140 (MQ=255)
                                                                  ccTGGACTGAGATTTCGTTCGATACCCTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                      <  1:1014542/140‑1 (MQ=255)
                                                                  ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                      <  1:2112895/140‑1 (MQ=255)
                                                                  ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                      <  1:1863490/140‑1 (MQ=255)
                                                                  ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑GGTGCCCCCCTTTTTTATTAAATTTTGTCCCTCGCGCTGTGGCCCACGCCGGCCCCccccgcccccgcc                                                                      >  2:1478619/1‑139 (MQ=255)
                                                                     ggACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGa                                                                   <  1:304618/140‑1 (MQ=255)
                                                                      gACTGAGATTTCGTTAGATACAGTCGCTGGCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGAt                                                                  <  1:1152681/140‑1 (MQ=255)
                                                                      gACTGAGATTTCGTTAGATACACTCGCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGAt                                                                  <  1:1056576/140‑1 (MQ=255)
                                                                          gagaTTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCaa                                                              <  1:1257130/140‑1 (MQ=255)
                                                                                   ttcgATGCACTCCCTGTTGAACTGCCGGTGTGACTTGAGATCGGC‑GGGTGTTCG‑ACTGCCCCCTTTTTGCATTAATGTTTCAGCCTCCCGCTCTAGCCAGCGCAGGACCCCCTCGCCATCGCGCGATGCAACG‑TTGGTAt                                                    <  2:1211563/140‑1 (MQ=255)
                                                                                   ttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTAt                                                    <  1:2089259/140‑1 (MQ=255)
                                                                                     cgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTG‑AATGCCCCCCTTTTTTAATAATGTTTTTGCCTCGCGCTGTAGCCAGCGCCGGCCCCCCCCCCCCCCCCCCGCGGCAACG‑TTGGTTTCg                                                  >  2:2455998/1‑140 (MQ=255)
                                                                                     cgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGGTG‑AATGCCCCCCTTTTTCAATAATATTTTCGCCCCCCCCCGTAGCCAGCGCAGGCCCCCCCCCCCCCCCCGCGGTGCCACGCTTGGttcg                                                   >  2:1986669/1‑137 (MQ=255)
                                                                                            cTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGa                                           <  1:1980874/140‑1 (MQ=255)
                                                                                            cTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGa                                           <  1:2232336/140‑1 (MQ=255)
                                                                                            cTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGa                                           <  2:1853532/140‑1 (MQ=255)
                                                                                             tCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGAt                                          <  1:1596568/140‑1 (MQ=255)
                                                                                             tCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGAt                                          <  1:507388/140‑1 (MQ=255)
                                                                                              cccTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCTCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATc                                         <  2:896187/140‑1 (MQ=255)
                                                                                               ccTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCg                                        <  1:1327299/140‑1 (MQ=255)
                                                                                                 tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGcc                                      <  1:1723244/140‑1 (MQ=255)
                                                                                                 tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGcc                                      <  1:72854/140‑1 (MQ=255)
                                                                                                 tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGcc                                      <  1:2466393/140‑1 (MQ=255)
                                                                                                 tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑GATGGCCCCCCTTTGTCAAAAAGTTTTGGCCCCCCCCTCTAGCCCGCGCAGGCCCCCCCCGACCCCCCCCGATGCGACG‑GTGGTGTTCCCGGTGAACGcc                                      >  2:598042/1‑140 (MQ=255)
                                                                                                 tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑GATGCCCCCCTTTTTTAATAATGTTTTCGCCCCGCGCCGGAGCCAGCGCACGCCCCCCCCCCCCCCCCCCGCTGCCACG‑TTGGTATCGCCGTTGGTCGcc                                      >  2:1441990/1‑140 (MQ=255)
                                                                                                  gTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCa                                     <  1:1937942/140‑1 (MQ=255)
                                                                                                  gTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATGCCCCCCTTTTTTAATAAAATTTTCGCCCCCCGCCGTAGCCAGCGCAGGCCCCCCCCCCCCCCCCCCGCTGCCACC‑GTGGTGTCGCCGTTGGTccccc                                     >  2:1410482/1‑139 (MQ=255)
                                                                                                   tCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCAt                                    <  1:1441990/140‑1 (MQ=255)
                                                                                                   tCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGATTGCGCCTCGCGTTGTAGCCAGCGCAGGCGCCCCTCGCCGCCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCAt                                    <  2:461525/140‑1 (MQ=255)
                                                                                                     gAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCG‑AATGCCCCCCTTTTTCAATAATGTTTTCGCCCCGCGCCGTAGCCCGCGCCGGCCCCCCCCCCCCCCCCCCGCGGCAACG‑GTGGGATCGCCGTTGATCGCCATCa                                  >  2:1931710/1‑140 (MQ=255)
                                                                                                      aaCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAg                                 <  1:2419427/140‑1 (MQ=255)
                                                                                                      aaCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAg                                 <  1:1771557/140‑1 (MQ=255)
                                                                                                       aCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGt                                <  1:186018/140‑1 (MQ=255)
                                                                                                           ccGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGa                            <  2:2482241/140‑1 (MQ=255)
                                                                                                            cGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAg                           <  2:2340092/140‑1 (MQ=255)
                                                                                                              gagaTAATCGAGATCGGC‑GGGGGTTGG‑AAGGCCCCCTGTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa                         <  1:866922/140‑1 (MQ=255)
                                                                                                              gagaTAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa                         <  1:2455998/140‑1 (MQ=255)
                                                                                                              gagaTAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa                         <  1:2150949/140‑1 (MQ=255)
                                                                                                              gagaTAATCGAGATCCGC‑GGGGCTTCG‑AACGCCCCCTGTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa                         <  1:738064/140‑1 (MQ=255)
                                                                                                                   aaTCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTa                    <  1:2363499/140‑1 (MQ=255)
                                                                                                                   aaTCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTa                    <  2:2007988/140‑1 (MQ=255)
                                                                                                                    aTCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTAt                   <  1:1276546/140‑1 (MQ=255)
                                                                                                                    aTCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTAt                   <  1:408270/140‑1 (MQ=255)
                                                                                                                       gagaTCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGa                <  1:2244741/140‑1 (MQ=255)
                                                                                                                              gc‑ggGGGTTCG‑AATGCCCCCTTTTTGCAATAGTGTTTGCACCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGc         <  2:782672/140‑1 (MQ=255)
                                                                                                                               c‑ggGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCCCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGAGCGCCATCAGTAGGAGCAAGGTATCGAGCAATGcc        <  2:1787869/140‑1 (MQ=255)
                                                                                                                                 gggggTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCa       <  1:1511546/140‑1 (MQ=255)
                                                                                                                                    ggTTCG‑AATGCCCCCCTTTTGCCATTATGCTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGtt    <  1:639513/140‑1 (MQ=255)
                                                                                                                                     gTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCGCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTc   <  2:2245924/140‑1 (MQ=255)
                                                                                                                                     gTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTc   <  2:2121384/140‑1 (MQ=255)
                                                                                                                                      ttCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCa  <  2:1399819/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                             
ATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCG‑AATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACG‑TTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCA  >  NC_000913/646614‑646886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑