| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,639,896 | A→G | G54G (GGT→GGC) | rrrQ ← | Qin prophage; putative lysozyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,639,896 | 0 | A | G | 98.8% | 286.3 / NA | 82 | G54G (GGT→GGC) | rrrQ | Qin prophage; putative lysozyme |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (33/48); minor base C (1/0); total (34/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGAC > NC_000913/1639762‑1640031 | tCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCg > 2:251680/1‑140 (MQ=255) tCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAg < 2:97968/140‑1 (MQ=255) tCAGTGGTACTTTAATATTGCGATCCACCAATGCCAGAGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAg < 1:838507/140‑1 (MQ=255) cAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGa < 1:347444/140‑1 (MQ=255) cAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGa < 2:37871/140‑1 (MQ=255) cAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCATTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGa < 2:1518764/140‑1 (MQ=255) gTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATg < 2:62753/140‑1 (MQ=255) tcTTTAATATTGCGCTCCACCCCTGTCAGGGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCa < 1:1190029/139‑1 (MQ=255) aCTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCa < 2:1856345/140‑1 (MQ=255) cTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGCAAAACGGTTTTTACATCCACCACTGTGGCGGCCCGACAGATGGTCCat > 2:838507/1‑140 (MQ=255) cTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCat < 1:2116067/140‑1 (MQ=255) cTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCat < 2:1406758/140‑1 (MQ=255) atatTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGcc > 2:1914166/1‑140 (MQ=255) atatTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGcc > 2:108381/1‑140 (MQ=255) atatTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGcc > 2:2071960/1‑140 (MQ=255) atatTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATCGCGGTGACCTAGTCCCATTTTTCCTTCGACAGTTTCATATTGGGAAAAAGGGTTTTTCCATCAACCTCTGTGGCGACCCGACAGATGGTCCATATGcc > 2:1024648/1‑140 (MQ=255) atTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAg < 2:1622054/140‑1 (MQ=255) ttGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGa > 2:215574/1‑140 (MQ=255) gcgcTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATg < 2:1671487/124‑1 (MQ=255) gcgcTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATg > 1:1671487/1‑124 (MQ=255) cgcTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCTGACAGATGGACCATATGCCAGAAcc > 1:946116/1‑140 (MQ=255) cgcTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCa > 1:1888078/1‑128 (MQ=255) cgcTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCa < 2:1888078/128‑1 (MQ=255) cgcTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAAcc > 2:943991/1‑140 (MQ=255) cgcTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAAcc > 1:91828/1‑140 (MQ=255) cgcTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCCCCCAGAAAGATGGTCCATATGCCAGAAcc > 1:1208617/1‑140 (MQ=255) cTCCACCCATGCCAGGGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCAt < 1:943991/140‑1 (MQ=255) cagaCCCATGCCAGCGCCTTATAACGCTCAATGGCTTTGGCCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATc < 2:792038/137‑1 (MQ=255) ccACCCATGCCAGCGCCTTATCGCGCTCAATTGCGCTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATcg < 2:683086/140‑1 (MQ=255) ccACCCATCCCAGCGCCTTATCACGCTCAATCGGGGTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATcg < 2:1208617/140‑1 (MQ=255) cACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATcgc > 2:1364519/1‑140 (MQ=255) cACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATcgc > 1:2000702/1‑140 (MQ=255) cACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATcgc > 2:1779811/1‑140 (MQ=255) aCCCATGCCAGCGCCTTGTCACTCTCAATGGTGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATcgcg < 2:887315/140‑1 (MQ=255) aCCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATcgcg < 2:563440/140‑1 (MQ=255) cccATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCgg > 2:143320/1‑140 (MQ=255) ccATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGt < 2:2131091/140‑1 (MQ=255) ccATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATG‑CAGAACCATCGCGGTa < 1:1238908/140‑1 (MQ=255) tGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATg < 2:211887/140‑1 (MQ=255) tGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATg < 2:1237258/140‑1 (MQ=255) ccAGCGCCTTATCACGCTCAATAGCATTGACCTGGTCCCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGcc < 1:1143507/140‑1 (MQ=255) aGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGAGAGATGGTGCATGTGACAGAACAATCGCGGTATGCCAt > 1:683086/1‑140 (MQ=255) aGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGGGGCGCCCCTACAAATGGTCCATATGTCAGAACCATCGCGGTATGCCAt > 2:917896/1‑140 (MQ=255) gcgcCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCGATATGCTAGAACCGTCGCGGTATGCCAtt > 1:708799/1‑140 (MQ=255) gcgcCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCAtt < 1:2055526/140‑1 (MQ=255) gcgcCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCAtt < 1:203616/140‑1 (MQ=255) gcgcCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCAtt < 1:1779811/140‑1 (MQ=255) cgcCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATtg > 2:1326951/1‑140 (MQ=255) cgcCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATtg > 2:2227795/1‑140 (MQ=255) cgcCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATtg > 1:423308/1‑140 (MQ=255) cgcCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCAGCGCGGTATGCCACtg > 1:792038/1‑140 (MQ=255) tATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTgg > 2:1436966/1‑140 (MQ=255) tCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGtt < 1:1436966/140‑1 (MQ=255) tCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGtt < 1:143320/140‑1 (MQ=255) aCGCTCAATGGCGTTCACCTGGTCGTATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTAc < 1:1048307/140‑1 (MQ=255) cTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACctt > 1:1667259/1‑140 (MQ=255) ggCGTTGACCTGGTCGCGTTTTTCCTTCGACCGTTTCATATTGGGAAAGACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCttttt < 2:708799/140‑1 (MQ=255) ggCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCttttt < 2:1965412/140‑1 (MQ=255) ttGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACGATCGCGGTATGCCATTATGTGGTTACCTTCTTTTTCGTc > 2:985642/1‑140 (MQ=255) tGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGaaa < 2:1667259/140‑1 (MQ=255) gTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACt < 2:1714866/140‑1 (MQ=255) gTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACt > 2:573037/1‑140 (MQ=255) gTCGCATTTTTACTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCttttt > 2:464811/1‑128 (MQ=255) gTCGCATTTTTACTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCttttt < 1:464811/128‑1 (MQ=255) aTTTTTCCTTCGACACTTTCATTTTAGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCa < 1:917896/140‑1 (MQ=255) tttCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGt < 1:1914166/140‑1 (MQ=255) tttCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGt < 1:2071960/140‑1 (MQ=255) tttCCTTCGACAGTTCCATATTTGGAAAAGCGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGt < 1:796191/140‑1 (MQ=255) tCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTAt < 2:423308/140‑1 (MQ=255) tCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTAt > 2:538152/1‑140 (MQ=255) ccTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATc < 2:2000702/140‑1 (MQ=255) ccTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTCGTTACCTGCTTATTGGTCCAGAAACTGGTCAAGTATc > 1:845171/1‑140 (MQ=255) tttCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGt > 2:1344517/1‑122 (MQ=255) tttCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGt < 1:1344517/122‑1 (MQ=255) cGGTTTTTCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATc < 1:573037/140‑1 (MQ=255) tttttCCATCCACCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAgc < 1:108381/140‑1 (MQ=255) ccatccaCCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAg < 1:2227795/140‑1 (MQ=255) atccaCCACTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGaa < 1:215574/140‑1 (MQ=255) cacTGTGGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAg < 1:2229860/140‑1 (MQ=255) gtgGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGTGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGa < 1:538152/140‑1 (MQ=255) tgGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATGTGAGGAGCGGATGCGCGAGCACCAAGCAGCGCCAGAACGGCAGCCGAc > 2:761698/1‑140 (MQ=255) tgGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGAc > 1:2108976/1‑140 (MQ=255) tgGCGCCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGAc > 2:411360/1‑140 (MQ=255) | TCGGTCAGTGGTACTTTAATATTGCGCTCCACCCATGCCAGCGCCTTATCACGCTCAATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGAC > NC_000913/1639762‑1640031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |