| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 267,569 | A→G | V146A (GTG→GCG) | yafZ ← | CP4‑6 prophage; conserved protein YafZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 267,569 | 0 | A | G | 99.1% | 374.8 / NA | 108 | V146A (GTG→GCG) | yafZ | CP4‑6 prophage; conserved protein YafZ |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (61/46); minor base C (0/1); total (61/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 116 total aligned reads displayed.
AGCGGTATGTGAGGGCGGCTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCACCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAGTAGAATAA > NC_000913/267432‑267704 | gCGGTATGTCAGCGCGGCTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGTATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTcgcca < 2:1541383/140‑1 (MQ=255) gTATGTGAGGGCGGCTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGt < 2:2078848/140‑1 (MQ=255) tATGTGAGGGCGGCTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTc > 2:2412861/1‑140 (MQ=255) tgtgAGGGCGGCTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTccc > 2:1632579/1‑140 (MQ=255) gggCGGCTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCGTACACGCCTTCAATCAACTGCCTCGCCACGTCCCCCTtg > 2:843477/1‑140 (MQ=25) ggcggcTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTtgt > 2:1921993/1‑140 (MQ=255) cggcTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTtgtgt > 2:140061/1‑140 (MQ=255) cggcTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTtgtgt < 2:1252575/140‑1 (MQ=255) cggcTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGAGCCTTCAATCAGCTGACTCGCTACGTCCCCCTtgtgt > 1:1162448/1‑140 (MQ=255) gcTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATGACCTGAGTCGCCAAGTCCCCCTTGTGTgg > 1:1117073/1‑140 (MQ=255) gcTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTccccc > 2:1448524/1‑132 (MQ=255) gcTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTgg > 1:1271765/1‑140 (MQ=255) tGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCGTACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCt > 2:2026188/1‑140 (MQ=255) ccTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCg < 1:1632579/140‑1 (MQ=255) tgtgCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCaaa < 1:2332248/140‑1 (MQ=255) tgtgCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCaaa < 1:1280701/140‑1 (MQ=255) gCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGa > 1:70592/1‑140 (MQ=255) gCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCAACTGACTCGGCACGTCCGCCTTGTGTGGCACGCGCACCTCGCCAAACGa > 2:665160/1‑140 (MQ=21) ccGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGAc < 1:2101059/140‑1 (MQ=255) cGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACt < 1:1585743/140‑1 (MQ=255) cGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACt < 1:366579/140‑1 (MQ=255) acagggTGGCAACAGTAACGACTGCCTGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACt < 1:681898/137‑1 (MQ=255) ggTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCAcc > 1:310386/1‑140 (MQ=255) ggTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCAcc > 1:2032595/1‑140 (MQ=255) ggCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACTTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCa > 2:258561/1‑140 (MQ=255) cAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGa > 2:149706/1‑140 (MQ=255) gCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGc > 1:1816599/1‑140 (MQ=255) cAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCTCCTTGTGTGGCAGCCGAACCTCGCCGAACGTATCACCGCAGACGAGcc > 2:1078315/1‑140 (MQ=18) cAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGTACCCGCAACTCCCCGAACGACTCACCGCAGACGAGcc > 1:662579/1‑140 (MQ=21) cAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCACCTTGTGTCGCAGCCGAACCTCGCCTAACGACTCACCGCAGACgctgt > 2:681898/1‑136 (MQ=21) aCGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCg > 2:169063/1‑140 (MQ=255) aCGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCg < 2:166029/140‑1 (MQ=255) cGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTTGCCTAATGACTCATCGCAGACGAGCCCGt > 1:1140232/1‑140 (MQ=21) gACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGtt > 2:1674209/1‑140 (MQ=255) aCTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCGCCTCGCCAAACGACTCACCGCAGACGAGCCCGTTc > 2:1415945/1‑140 (MQ=255) cATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGAc > 2:1861315/1‑140 (MQ=255) cATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGAc > 2:2103525/1‑140 (MQ=255) aTGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACa > 1:1433050/1‑140 (MQ=255) aTGGCATCCCGTTTCACCTCCACCCTGTCCAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACa < 1:665160/140‑1 (MQ=255) cccGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGTCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCa < 1:588195/140‑1 (MQ=255) cccGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCa > 2:1274155/1‑140 (MQ=255) cccGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCa > 2:1449554/1‑140 (MQ=255) ccGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCAc < 1:1674209/140‑1 (MQ=255) cGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACg > 1:553086/1‑140 (MQ=255) tttCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGaa > 1:1582023/1‑140 (MQ=255) tctcCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAAt > 2:2146112/1‑140 (MQ=255) tcctccACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAg > 2:2494077/1‑140 (MQ=255) ctccACCCTGTCAAAAACCCCCCGCACCTCATAGGGGCCGTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTc < 2:1162448/140‑1 (MQ=21) ctccACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACa > 1:1678924/1‑123 (MQ=255) ctccACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACa < 2:1678924/123‑1 (MQ=255) cACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCg > 1:42378/1‑140 (MQ=255) cccGGTCAAACATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGc < 1:2485000/140‑1 (MQ=255) cccGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGc < 2:73925/140‑1 (MQ=255) cccGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGc < 2:1271765/140‑1 (MQ=255) ccGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCa < 1:1507105/140‑1 (MQ=255) gTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACa > 1:1673349/1‑140 (MQ=255) tCAAAAATCCCCAGTACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACAt < 2:2198506/140‑1 (MQ=255) tCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCTCGTTCTGCCAATCCTCACGAAATAGTCCCGGCAACAt > 1:1188216/1‑140 (MQ=21) tCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACAt < 2:119548/140‑1 (MQ=255) tCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACAt > 2:389266/1‑140 (MQ=255) tCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACAt < 1:389266/140‑1 (MQ=255) aaaaTCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTg < 1:1225468/140‑1 (MQ=255) aTCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATa < 1:1996233/140‑1 (MQ=255) cccAGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGa > 2:1277467/1‑140 (MQ=255) ccAGCACCGCATACGCGACTTCCATCACCTCCCTCCCCAAGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGaa < 2:1188216/140‑1 (MQ=25) aGCACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAGCCGCACGAAATAGTCCCGGCAACATCTGATACGAACt > 1:1093403/1‑140 (MQ=255) cACCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTgg > 1:2332559/1‑140 (MQ=255) aCCTCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGt < 1:169063/140‑1 (MQ=255) aCCTCATACGCGCCTCCAATCAGCTGACTCGCCACGTTCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGt < 1:843477/140‑1 (MQ=255) aCCTCATACGCGCCTACAATCGGCTGACTCGCCACGTTCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGt < 1:1078315/140‑1 (MQ=25) tCATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTcc < 2:1675606/140‑1 (MQ=255) cATACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACCAAATAGTCCCGCCAACATCTGATACGAACTGGTTCCa > 1:993906/1‑140 (MQ=255) aTACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCAt < 2:2332559/140‑1 (MQ=255) aTACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCAt < 1:2103525/140‑1 (MQ=255) tACGCGCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATc > 1:2236336/1‑140 (MQ=255) cgcgCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGt < 2:2185510/140‑1 (MQ=255) cgcgCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGt < 1:1277467/140‑1 (MQ=255) cgcgCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGt < 2:2236336/140‑1 (MQ=255) cgcgCCTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGt < 1:499330/140‑1 (MQ=255) ccTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCAt < 2:1895310/133‑1 (MQ=255) ccTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCAt > 1:1895310/1‑133 (MQ=255) ccTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTgaga > 2:137828/1‑140 (MQ=255) ccTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTgaga > 2:1577307/1‑140 (MQ=255) ccTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCACACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTgaga > 2:37594/1‑140 (MQ=255) cTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGagag < 1:149706/140‑1 (MQ=255) cTTCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGagag < 2:310386/140‑1 (MQ=255) tCAATCACCTGACTCTCCACGTACCGCTTCTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGtt < 1:1142405/140‑1 (MQ=255) tCAATCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGtt > 1:1920052/1‑140 (MQ=255) tCAATCACCTGACTCGCAACGTCCCCCTTGTTTGGAACCAGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGtt < 2:1011077/140‑1 (MQ=21) aaTCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGa < 1:2014583/140‑1 (MQ=255) aTCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAg < 1:2412861/140‑1 (MQ=255) aTCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAg < 2:553086/140‑1 (MQ=255) aTCACCTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAg < 1:1622834/140‑1 (MQ=255) cTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAGTAGaa > 1:1438206/1‑140 (MQ=255) cTGACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAGTAGaa > 1:2459337/1‑140 (MQ=255) gACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCGGGCAACATTTGACACGGACTGGTTCAATCGTGAGAGCTGAGTAGaata > 2:711478/1‑140 (MQ=25) gACTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAGTAGaata > 2:25525/1‑140 (MQ=255) aCTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAGTAGaataa > 1:1809755/1‑140 (MQ=255) aCTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAGTAGaataa > 1:2448450/1‑140 (MQ=255) aCTCGCCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAGTAGaataa > 2:1846310/1‑140 (MQ=255) | AGCGGTATGTGAGGGCGGCTTTTGCCAGTGCCTGCTGTGCCGGGGGTGGCAACAGCAACGACTGCATGGCATCCCGTTTCTCCTCCACCCGGTCAAAAATCCCCAGCACCTCATACGCGCCTTCAATCACCTGACTCACCACGTCCCCCTTGTGTGGCACCCGCACCTCGCCAAACGACTCACCGCAGACGAGCCCGTTCTGACAAACCGCACGAAATAGTCCCGGCAACATCTGATACGAACTGGTTCCATCGTGAGAGTTGAGTAGAATAA > NC_000913/267432‑267704 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |