| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,871,508 | G→A | W375* (TGG→TAG) | cdgI → | putative c‑di‑GMP binding protein CdgI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,871,508 | 0 | G | A | 98.8% | 563.9 / NA | 168 | W375* (TGG→TAG) | cdgI | putative c‑di‑GMP binding protein CdgI |
| Reads supporting (aligned to +/- strand): ref base G (1/0); major base A (89/76); minor base T (1/1); total (91/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 174 total aligned reads displayed.
CATGATGTGCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATGGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCAATAGTGCCCAG > NC_000913/1871372‑1871644 | cATGATGTGCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATaggg > 2:40985/1‑140 (MQ=255)cATGATGTGCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGATGATATTCATCAGTTCAAACGCATCAATGCCCAATaggg > 2:930021/1‑140 (MQ=255) atgatgTGCTGACCAATATTTAGAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGa < 1:930021/140‑1 (MQ=255) atgatgTGCTGACCAATATTTACAATCGGGGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGa < 1:1011762/140‑1 (MQ=255) tgatgTGCTGACCAATATTTATAATCGGCGCTACTTTTTCAATAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGAc < 2:1548760/140‑1 (MQ=255) atgTGCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACAt > 1:2398830/1‑140 (MQ=255) gtgCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGa < 1:1654510/135‑1 (MQ=255) tgCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCgt < 2:510193/140‑1 (MQ=255) gCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATTAATGCCCAATAGGGACATCgtg > 1:1651314/1‑140 (MQ=255) gCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCgtg > 1:250413/1‑140 (MQ=255) gCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAAACAGTTCAGACGAATCAATGCCGAATAGGGACATCgtg > 1:754123/1‑140 (MQ=255) cTGACCAATATTTATAATCGGTGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATTAGTTCAATCGCTTCAATGCCCTATAGGGACATCgtgt > 1:939074/1‑140 (MQ=255) cTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCgtgt > 2:1940866/1‑140 (MQ=255) cTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCgtgt < 1:2380094/140‑1 (MQ=255) cTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCgtg > 2:358178/1‑139 (MQ=255) aCCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTggg < 1:1733655/140‑1 (MQ=255) aCCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTggg > 2:1581747/1‑140 (MQ=255) ataATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTg > 1:1261408/1‑140 (MQ=255) ataATCGGCGCTACTTTTTCAACAGCGTACAGTCATTCTTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTg < 1:742750/140‑1 (MQ=255) aaTCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAGTAGGGAAATCGTGCGGGTGATAAAGTGCt > 1:1206381/1‑140 (MQ=255) cGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTggg < 1:1855743/125‑1 (MQ=255) cGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTggg > 2:1855743/1‑125 (MQ=255) cGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGt > 2:2114186/1‑140 (MQ=255) cGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGt > 2:578121/1‑140 (MQ=255) ggCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATTGGGACATCGTGTGGGTGATAAAGTGCTGGtt > 2:1054051/1‑140 (MQ=255) cgcTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGt > 1:373428/1‑137 (MQ=255) tttttCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGt < 1:2039926/140‑1 (MQ=255) tttttCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGt < 2:2398830/140‑1 (MQ=255) tttttCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGt < 1:1397086/140‑1 (MQ=255) cAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGAtatta < 1:318673/140‑1 (MQ=255) aGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGAtattat > 1:1543077/1‑140 (MQ=255) gCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACACATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATc > 1:1932869/1‑140 (MQ=255) cGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGCTTCAATTGTCGATATTATcc > 2:2094648/1‑140 (MQ=255) agagTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGc < 2:250413/140‑1 (MQ=255) ttattGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTATCAGTTGTCGATACTATCCAGCAAAGCAt > 1:642962/1‑140 (MQ=255) tGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACACATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGc < 2:1932869/140‑1 (MQ=255) gTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGcc > 2:2444844/1‑140 (MQ=255) cgcgACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGcccc > 2:527517/1‑140 (MQ=255) cgcgACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGcccc < 2:2295289/140‑1 (MQ=255) cgcgACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGcccc > 1:2215511/1‑140 (MQ=255) cgcgACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATC‑ATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCg > 2:588398/1‑140 (MQ=255) cgACCTGTTGTTAAGGATTTCTTTGTCATGATGCTTGATATTAATCAGGTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCga < 2:1206381/140‑1 (MQ=255) tAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAg > 1:1279759/1‑140 (MQ=255) aGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAATCGCATCAATGCCCAATAAGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTGGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAgcg < 2:1606684/140‑1 (MQ=255) aGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTGTCCAGCAAAGCAGCCGCGCCGATGATATTTTAgcg > 2:840024/1‑140 (MQ=255) aGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAgcg > 2:1686168/1‑140 (MQ=255) aGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAgcg < 1:2150270/140‑1 (MQ=255) gACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCga > 1:540979/1‑125 (MQ=255) gACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCga < 2:540979/125‑1 (MQ=255) aCTTCTGTGTCATGCTGGTTGATATTAATCATTTCAAACGCATCAATGTCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGa < 2:1014237/140‑1 (MQ=255) aCTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATC‑‑CCCCGATGATATTTTAGCGCGACt < 1:1864850/140‑1 (MQ=255) cTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGAc > 2:2275619/1‑140 (MQ=255) cTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGAc > 2:2279333/1‑140 (MQ=255) cTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGAc > 2:221789/1‑140 (MQ=255) cTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGAc > 2:153302/1‑140 (MQ=255) cTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTgg > 1:466022/1‑140 (MQ=255) cTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTgg > 1:97960/1‑140 (MQ=255) cTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTgg > 2:1720558/1‑140 (MQ=255) cTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTgg > 2:1666346/1‑140 (MQ=255) cTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTgg < 2:258697/140‑1 (MQ=255) tgtgTCATGCTGGTTGATATTACTCAGTTCACACGAATCCATGCCCAACAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGa < 2:871700/140‑1 (MQ=255) tgtCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAgg > 2:2172886/1‑140 (MQ=255) tCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAgggg > 2:214482/1‑139 (MQ=255) cATGCTGGTTGATATTATTCAGCTCAAACGCTTCACTGCCCAATAGGGTCATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTg < 2:733643/140‑1 (MQ=255) cATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTg < 2:1459760/140‑1 (MQ=255) gCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAgg < 2:1261408/140‑1 (MQ=255) cTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGgt > 1:2047749/1‑140 (MQ=255) ggTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGgtgt < 1:221789/140‑1 (MQ=255) gTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGtt < 1:2188441/140‑1 (MQ=255) gTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGtt > 1:1461097/1‑140 (MQ=255) gTTGATATTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGtt > 2:1271087/1‑140 (MQ=255) atatTAATCAGTTCAAACGCATTAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGc < 2:1651314/140‑1 (MQ=255) tatTAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGAGGATATTTGAGCCCGGCTGGAGTGTGAGGTGTTTGGCt > 1:717408/1‑140 (MQ=255) ttAATCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTg < 1:1581747/140‑1 (MQ=255) aTCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTg > 2:80242/1‑123 (MQ=255) aTCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGgtgt < 2:221116/129‑1 (MQ=255) aTCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTa > 2:1721242/1‑140 (MQ=255) aTCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTa > 2:1736676/1‑140 (MQ=255) aTCAGTTCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTa > 1:56457/1‑140 (MQ=255) ttCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAATCATCCGCCCCGATGATATTTGAGCGCGAATGGAGGGTAAGGTCTTTGGCTTGCTATTTAc > 2:1031347/1‑140 (MQ=255) ttCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAc > 2:2010073/1‑140 (MQ=255) ttCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAc > 1:1973057/1‑140 (MQ=255) ttCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAc > 1:2283631/1‑140 (MQ=255) ttCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAc > 1:2428686/1‑140 (MQ=255) ttCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAc > 2:2040039/1‑140 (MQ=255) ttCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAACGCGACTCGAGCGTAAGGTGTTTGGCTTGCTATTTAc > 1:797294/1‑140 (MQ=255) tCAAACGCATCAATGTCCAATAAGGACATGGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAATCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAcc < 1:1031347/140‑1 (MQ=255) tCAAACGCATCAATGTCCAATAAGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAcc < 1:840024/140‑1 (MQ=255) tCAAACGCATCAATGCCTAATAAGGACATCGTGTGCGTGCTAAAGTGCCGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAcc < 2:642962/140‑1 (MQ=255) tCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAcc < 1:2444844/140‑1 (MQ=255) tCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAcc < 1:2172886/140‑1 (MQ=255) tCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAcc < 1:2114186/140‑1 (MQ=255) tCAAACGCATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAcc < 1:1683467/140‑1 (MQ=255) tCAAACGCATCAATGCCAAATACGGACATCGGGTGGGTGATAAAGTGCGGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTAcc < 2:939092/140‑1 (MQ=255) cGCATCAATGCCCAATAGGGACATCGTGTGGGTGACAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACt < 2:1409787/140‑1 (MQ=255) cATCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCa > 1:1241489/1‑140 (MQ=255) tCAATGCCCAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCAAt > 1:293638/1‑140 (MQ=255) cccAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCAATAGTGcc < 1:1008916/140‑1 (MQ=255) ccAATAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCAATAGTGccc < 1:2010073/140‑1 (MQ=255) aaTAGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCAATAGTGCCCAg > 2:1645336/1‑140 (MQ=255) | CATGATGTGCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATGGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCAATAGTGCCCAG > NC_000913/1871372‑1871644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |