BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,974,645	T→C	E227G (GAA→GGA)	cheA ←	chemotaxis protein CheA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,974,645	0	T	C	100.0%	391.1 / NA	108	E227G (GAA→GGA)	cheA	chemotaxis protein CheA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (47/61); total (47/61)

Only 100 of 109 total aligned reads displayed.

GATCAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTCACCACGTCAGTTAACGTTGTCA  >  NC_000913/1974508‑1974780

gATCAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGGTTATGCAGTGGTGGGGAGGATATTTTTGGCGAGACTCCt                                                                                                                                       >  2:651138/1‑140 (MQ=255)

gATCAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGGTTAAGAAATGGTGGGGGGGATACTTTTGGCGAGACTCCt                                                                                                                                       >  2:1152093/1‑140 (MQ=255)

gATCAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCCGCTGCCAGTTTAGGTAGTGGTGGGGGGGATATTTTTGGCGAGACTCCt                                                                                                                                       >  2:1098241/1‑140 (MQ=255)

 aTCAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTa                                                                                                                                      <  1:65031/140‑1 (MQ=255)

 aTCAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTa                                                                                                                                      <  2:1663036/140‑1 (MQ=255)

  tCAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTAc                                                                                                                                     <  1:1596245/140‑1 (MQ=255)

   cAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACt                                                                                                                                    <  1:15971/140‑1 (MQ=255)

   cAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCCGCCAGTTTAAGCACGGGTGGGGTGGCTATTCTTGGCGAGACTCCTACt                                                                                                                                    >  2:1184260/1‑140 (MQ=255)

   cAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCAGCCAGTTTGAGCCCTGTTGGGGTGGATATTGTTGGCGAGGCTCCTACt                                                                                                                                    >  2:1181735/1‑140 (MQ=255)

       cTTTTCTACCGCTACTCGGATGTTGTTGGCTTCATTGTTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGttt                                                                                                                                <  1:764108/140‑1 (MQ=255)

       cTTTTCTACCGCTACCCGGATGCTGGTGGTTTCATTGTTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGttt                                                                                                                                <  1:1098241/140‑1 (MQ=255)

         tttCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTAc                                                                                                                                     <  2:1798799/133‑1 (MQ=255)

         tttCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTAc                                                                                                                                     >  1:1798799/1‑133 (MQ=255)

          ttCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCaa                                                                                                                             <  1:1701829/140‑1 (MQ=255)

            cTACCGCTACACGGACGCTGGTAGACTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAg                                                                                                                           <  1:1152093/140‑1 (MQ=255)

                cGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTTGATATTTATGGGGAAACTCCTACTGTTTCAAAGGTaa                                                                                                                       >  1:711324/1‑140 (MQ=255)

                cGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGCTATCTTTGGCGAGACTCCTACTGTTTCAAAGGTaa                                                                                                                       >  2:1035632/1‑140 (MQ=255)

                cGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGttt                                                                                                                                <  1:2344011/131‑1 (MQ=255)

                cGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGttt                                                                                                                                >  2:2344011/1‑131 (MQ=255)

                cGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTaa                                                                                                                       >  2:1317175/1‑140 (MQ=255)

                cGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTaa                                                                                                                       >  2:1771766/1‑140 (MQ=255)

                cGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTCGATATTTTTGGTGAAACTCCTACTGTTTCAAAggctg                                                                                                                       >  1:989093/1‑137 (MQ=255)

                 gCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTTGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAAt                                                                                                                      >  2:1584569/1‑140 (MQ=255)

                 gCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAAt                                                                                                                      >  1:1325634/1‑140 (MQ=255)

                 gCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTAATGTTTCAAAGGTAAt                                                                                                                      >  1:937355/1‑140 (MQ=255)

                  cTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTc                                                                                                                               <  2:382814/130‑1 (MQ=255)

                  cTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTc                                                                                                                               >  1:382814/1‑130 (MQ=255)

                  cTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATc                                                                                                                     >  2:405787/1‑140 (MQ=255)

                    acacGGATGCTGGTGGATTCATTGCTGCGCGTCGTTTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCt                                                                                                                    >  1:101171/1‑140 (MQ=255)

                      acGGATGCTGGTGGATTCATTGCTGCGCGTCC‑TTTGTTCACGCTCCACTCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGAt                                                                                                                 <  2:711324/140‑1 (MQ=255)

                       cGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATc                                                                                                                >  1:2029117/1‑140 (MQ=255)

                            gCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCtt                                                                                                           >  1:280548/1‑140 (MQ=255)

                             cTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTc                                                                                                          >  1:46978/1‑140 (MQ=255)

                             cTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTc                                                                                                          <  1:405787/140‑1 (MQ=255)

                                gtggATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAAt                                                                                                       >  1:2287456/1‑140 (MQ=255)

                                gtggATTCATTGCTGAGCGTCG‑ATTATTCTCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTTAAAGGTAATCTGATCGGCTTCAAt                                                                                                       <  1:1163731/140‑1 (MQ=255)

                                  ggATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATca                                                                                                     <  1:1664913/140‑1 (MQ=255)

                                  ggATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATca                                                                                                     <  2:1325634/140‑1 (MQ=255)

                                    aTTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATcaca                                                                                                   >  1:2217094/1‑140 (MQ=255)

                                    aTTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATcaca                                                                                                   <  1:1236161/140‑1 (MQ=255)

                                    aTTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATcaca                                                                                                   <  2:628903/140‑1 (MQ=255)

                                    aTTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATcaca                                                                                                   >  2:1930895/1‑140 (MQ=255)

                                    aTTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATcaca                                                                                                   <  2:280548/140‑1 (MQ=255)

                                    aTTCATTGCTGCGCGTCG‑TTTTTTCCCGCCCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATcaca                                                                                                   >  1:1912003/1‑140 (MQ=255)

                                       cATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACaaaa                                                                                                <  1:263163/140‑1 (MQ=255)

                                        aTTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAAc                                                                                               >  1:590599/1‑140 (MQ=255)

                                        aTTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAAc                                                                                               >  1:1753943/1‑140 (MQ=255)

                                         ttGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACa                                                                                              <  1:2331282/140‑1 (MQ=255)

                                         ttGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACa                                                                                              <  1:2328472/140‑1 (MQ=255)

                                          tgctgcGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACa                                                                                              >  2:1542458/1‑139 (MQ=255)

                                          tgctgcGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACa                                                                                              <  1:1542458/139‑1 (MQ=255)

                                            ctgcGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACagag                                                                                           <  2:585813/140‑1 (MQ=255)

                                            ctgcGCGTCG‑TTTTTTCCCGCCCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACagag                                                                                           <  2:1912003/140‑1 (MQ=255)

                                              gcgcGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTa                                                                                         <  1:1262947/140‑1 (MQ=255)

                                               cgcgTCG‑TTTTTTCCGGCTCCACGCAGCCCGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTAc                                                                                        <  1:865435/140‑1 (MQ=255)

                                                 cgtcg‑tTTTTTCCCGCTCCACGCGGTCGGGTGGCGCTAGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCg                                                                                      <  1:1198203/140‑1 (MQ=255)

                                                 cgtcg‑tTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCg                                                                                      >  1:1601990/1‑140 (MQ=255)

                                                 cgtcg‑tTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCg                                                                                      <  1:1845058/140‑1 (MQ=255)

                                                    cg‑tTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCtg                                                                                   >  2:1577861/1‑140 (MQ=255)

                                                                 cTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCtt                                                                       >  1:2476140/1‑140 (MQ=255)

                                                                 cTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCtt                                                                       >  1:74579/1‑140 (MQ=255)

                                                                     aCGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGc                                                                   >  2:248486/1‑140 (MQ=255)

                                                                        cgGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGAt                                                                <  2:2029117/140‑1 (MQ=255)

                                                                          gCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGt                                                              <  2:2287456/140‑1 (MQ=255)

                                                                          gCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGt                                                              <  2:937355/140‑1 (MQ=255)

                                                                           ccGGTTGGCGCTTGTTCGGCTGGCAGTTTAAACACGGGTTGGGTGGATGTTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTc                                                             <  2:817621/140‑1 (MQ=255)

                                                                            cGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCg                                                            <  2:1753943/140‑1 (MQ=255)

                                                                            cGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCg                                                            <  2:101171/140‑1 (MQ=255)

                                                                             ggTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGc                                                           <  1:1577861/140‑1 (MQ=255)

                                                                              gTTGGCGCTTGTTTGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGcc                                                          <  1:1584569/140‑1 (MQ=255)

                                                                              gTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGcc                                                          >  1:2426557/1‑140 (MQ=255)

                                                                               ttGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGccc                                                         <  2:2217094/140‑1 (MQ=255)

                                                                               gtGGCGCTTGTTCGGCTCCCAGTTTAAGCACCGGTTGGGAGGATATTTCTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGccc                                                         <  2:754239/139‑1 (MQ=255)

                                                                                 ggCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCgg                                                       <  2:590599/140‑1 (MQ=255)

                                                                                 ggCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCgg                                                       <  1:2048246/140‑1 (MQ=255)

                                                                                 ggCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCgg                                                       <  2:2426557/140‑1 (MQ=255)

                                                                                        gTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAGCAGAGTACGGCTGTGAAGTCATCTTAGGCGGTGTCGCCCGGTAATAtt                                                >  2:645111/1‑140 (MQ=255)

                                                                                         ttCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACTGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTg                                               >  1:2162147/1‑140 (MQ=255)

                                                                                         ttCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTg                                               >  2:453885/1‑140 (MQ=255)

                                                                                           cGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGcc                                             <  1:1771766/140‑1 (MQ=255)

                                                                                           cGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCAGCTTGGGAGATGTCACCCGGTAATATTGcc                                             >  1:754239/1‑140 (MQ=255)

                                                                                                gCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGagag                                        <  1:1317175/140‑1 (MQ=255)

                                                                                                gCCAGTTTAAGCACTAGTGGGGCGGATATGTTTGGCGGGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGagag                                        <  1:1035632/140‑1 (MQ=255)

                                                                                                   aGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGa                                     <  1:453885/140‑1 (MQ=255)

                                                                                                        aaGCACTGGTGGGGTTGATATTTTTGGCGTGACTCCTTCTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCg                                <  1:1181735/140‑1 (MQ=255)

                                                                                                        aaGCACTGGTGGGGTGGATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCg                                <  2:181130/140‑1 (MQ=255)

                                                                                                          gCACTGGTGGGGTGGTTATTTTCGGTGAGTCTCCTACAGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGcc                              <  1:645111/140‑1 (MQ=255)

                                                                                                               ggtggggtggATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGcc                              >  2:1525088/1‑135 (MQ=255)

                                                                                                                gtggggtggATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGGCCGGTAATATTGGCGAGTGCGAATCCGCCCCTTTc                        >  2:825494/1‑140 (MQ=255)

                                                                                                                gtggggtggATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGagag                                        >  2:2391703/1‑124 (MQ=255)

                                                                                                                gtggggtggATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGagag                                        <  1:2391703/124‑1 (MQ=255)

                                                                                                                     gtggATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTcaccac                   >  2:1768810/1‑140 (MQ=255)

                                                                                                                     gtggATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTcaccac                   >  2:1314652/1‑140 (MQ=255)

                                                                                                                      tggATATTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTCACCACg                  <  1:1768810/140‑1 (MQ=255)

                                                                                                                          tatTTTTGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTCACCACGTCAg              >  1:622424/1‑140 (MQ=255)

                                                                                                                             ttttGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTCACCACGTCAGTTa           <  1:1314652/140‑1 (MQ=255)

                                                                                                                              tttGGCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTCACCACGTCAGTTaa          >  2:424288/1‑140 (MQ=255)

                                                                                                                                 gacaggaCTCCTACTGTATCAATGGTAATCTTATCTGCTCCAATCACATAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTCACCACGTCAGTTAACGt       <  2:985713/135‑1 (MQ=255)

                                                                                                                                  gCGAGACTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTCACCACGTCAGTTAACGtt      >  2:286997/1‑140 (MQ=255)

                                                                                                                                      gaCTCCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTCACCACGTCAGTTAACGTTGTCa  <  2:2476140/140‑1 (MQ=255)

GATCAACCTTTTCTACCGCTACACGGATGCTGGTGGATTCATTGCTGCGCGTCG‑TTTTTTCCCGCTCCACGCGGCCGGTTGGCGCTTGTTCGGCTGCCAGTTTAAGCACTGGTGGGGTGGATATTTTTGGCGAGACTTCTACTGTTTCAAAGGTAATCTGATCGGCTTCAATCACAAAACAGAGTACCGCTGTGATGTCATCTTCGGCGATGTCGCCCGGTAATATTGCCGAGAGCGAATCCGCCCCTTTCACCACGTCAGTTAACGTTGTCA  >  NC_000913/1974508‑1974780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`