| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,167,478 | T→C | T15A (ACA→GCA) | ogrK ← | prophage P2 late control protein OgrK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,167,478 | 0 | T | C | 99.5% | 674.1 / NA | 192 | T15A (ACA→GCA) | ogrK | prophage P2 late control protein OgrK |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (97/94); total (97/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 195 total aligned reads displayed.
GGCCTTACGACGTGGACTTCTCCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGTACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCATTATC > NC_000913/2167342‑2167613 | ggCCTTACGACGTGGACTTCTCTCGACTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCAcg < 1:1001261/140‑1 (MQ=255)ggCCTTACGACGTGGACTTCTCCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCAcg > 2:98175/1‑140 (MQ=255)ggCCTTACGACGTGGACTTCTCCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCAcg < 2:2452404/140‑1 (MQ=255) ttACGACGTGGACTTCTCCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCa > 2:2443527/1‑140 (MQ=255) tGGACTTCTCCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAGCGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGc > 2:1469586/1‑140 (MQ=255) tGGACTTCTCCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGc > 2:2094892/1‑140 (MQ=255) cTTCTCCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAGCGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGc < 1:1469586/140‑1 (MQ=255) cTTCTCCCGGCTTCACAATGTACCGCTGTACCGACTCATCAGTGATGATCGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGc < 2:902345/140‑1 (MQ=255) tcCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGc > 1:466926/1‑140 (MQ=255) tcCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCA‑GTGCGGCATGCTGGCa > 1:1998870/1‑140 (MQ=255) tcCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTATCGTGTCAATGAGATAGCGGCTTGCGCGCGAATGTGCGGCATGCTGGc > 2:1036943/1‑140 (MQ=255) cccGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTCGCAGGCGCCTTGGCGGCATTCTGGCa > 1:758549/1‑140 (MQ=255) cGGCTTCACAATGTATCCCTGTCCCGACTCACAAGTGATCAACGTGGCCCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATa < 2:657305/140‑1 (MQ=255) ggCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATaa > 2:1845897/1‑140 (MQ=255) ttCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGGGGCTTGCTCGCTCATGTGCGGCATGCTGGCATAAAgg > 1:657305/1‑140 (MQ=255) tCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGa < 1:583401/140‑1 (MQ=255) cacaATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAg < 1:362609/137‑1 (MQ=255) tATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGaa < 1:524058/139‑1 (MQ=255) tCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACa < 2:307692/140‑1 (MQ=255) cGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACAt > 1:1325142/1‑140 (MQ=255) gTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATcgcg < 2:2140372/140‑1 (MQ=255) tACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTACACGCGCATGTGGGGCATGCTGGCATAAAGAACAATGAAACATCGCGa > 2:784385/1‑140 (MQ=255) tACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTCATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGa > 1:319406/1‑140 (MQ=255) tACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCATGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGa > 1:2207957/1‑140 (MQ=255) aCCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAg < 2:1392055/140‑1 (MQ=255) ccGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGc > 2:212076/1‑140 (MQ=255) ccGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGc > 2:1261678/1‑140 (MQ=255) cGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCa < 2:1325142/140‑1 (MQ=255) aCTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCAcc > 1:2362167/1‑140 (MQ=255) aCTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCAcc > 1:1493876/1‑140 (MQ=255) aCTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCAcc > 2:556653/1‑140 (MQ=255) tAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTc > 1:1657013/1‑140 (MQ=255) tAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTc < 1:1261678/140‑1 (MQ=255) tAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTc < 2:606644/140‑1 (MQ=255) aGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTcc < 2:1303772/139‑1 (MQ=255) gTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCgg > 2:34777/1‑140 (MQ=255) gatgaACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGtt < 1:2064016/140‑1 (MQ=255) atgaACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGttt > 2:382875/1‑140 (MQ=255) tgaACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGtttt > 1:405619/1‑140 (MQ=255) gaACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCATGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTttg < 2:2207957/140‑1 (MQ=255) aaCGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACTTCGCGAGCACCTCTTCCGGTTttgt > 1:1079280/1‑140 (MQ=255) ggCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTttgtt > 1:117324/1‑136 (MQ=255) ggCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATg > 2:19226/1‑140 (MQ=255) ggCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATg > 1:1551045/1‑140 (MQ=255) ggCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATg > 2:1269782/1‑140 (MQ=255) ggCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACAACGCGAGAACCTCTGCCGGTTTTGTTGATg > 1:743297/1‑140 (MQ=255) cgcTGCAAATCACGTTCTGACAGTGGTGATCCCTCCCTTTTGTCGTGTAAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGt < 2:1187471/140‑1 (MQ=255) gcTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTg < 2:2127306/140‑1 (MQ=255) cTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCA‑GTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGcc < 2:1998870/140‑1 (MQ=255) aaTTCACGTTCTGACACGGGTGATAACGCTCCTTTGTCGCGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCAtt < 2:844256/140‑1 (MQ=255) tCACGTTCTGACACTGGGGATAGCGCTCTTTTGTCTTGTGAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTa < 2:813655/140‑1 (MQ=255) tCACGTTCTGACACTAGTGATAACGATCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCTCCTCTTCCGGTTTTGTTGATGGTGCCATTTTa < 1:1036943/140‑1 (MQ=255) cACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAg < 2:496560/140‑1 (MQ=255) cACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAg < 1:2081102/140‑1 (MQ=255) cACGTTCTGACACTGCTGATAATGCCCTTATGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAg < 1:803622/140‑1 (MQ=255) ttCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTaa < 1:2136609/140‑1 (MQ=255) tCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAAt > 1:2376480/1‑140 (MQ=255) gACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTa > 2:1737132/1‑140 (MQ=255) acacTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTAc < 2:2376480/140‑1 (MQ=255) gTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAg < 1:605860/125‑1 (MQ=255) gTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTac > 2:1877363/1‑140 (MQ=255) gTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTac > 2:2310223/1‑140 (MQ=255) gTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTac > 2:1826775/1‑140 (MQ=255) gATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTCATTTACCCTTacaa < 2:1551045/140‑1 (MQ=255) cGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTacaaaacaa < 2:440830/140‑1 (MQ=255) cGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTacaaaacaa < 1:61648/140‑1 (MQ=255) gCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTacaaaacaaa < 2:2362167/140‑1 (MQ=255) gCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTacaaaacaaa > 1:1407550/1‑140 (MQ=255) tctTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTacaaaacaa > 2:2320560/1‑137 (MQ=255) tctTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTacaaaacaa < 1:2320560/137‑1 (MQ=255) tctTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAaacaaaca > 2:1241982/1‑140 (MQ=255) tctTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAaacaaaca > 2:538088/1‑140 (MQ=255) tctTTTGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAaacaaaca > 1:546795/1‑140 (MQ=255) ttttGTCGTGTCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGa < 1:557456/140‑1 (MQ=255) gtgtCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTCTAGTTAACTTAGCCATACAAATCAAACAGataaaata > 1:1219049/1‑140 (MQ=255) tgtCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGataaaataa < 1:212466/140‑1 (MQ=255) tCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGAtaaaataaaa > 1:1875859/1‑140 (MQ=255) tCAGTGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAATTAATTTACCCATAGAAAACAGACAGAtaaaataaaa > 1:683986/1‑140 (MQ=255) aGTGATATAGCGGCTTGCACGCGCATGTGCGACATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGa < 1:1621026/128‑1 (MQ=255) aGTGATATAGCGGCTTGCACGCGCATGTGCGACATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGa > 2:1621026/1‑128 (MQ=255) gTGATATAGCGGCTTGCCCGCGTATGTGCGGTATGATGGGATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATTGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACa < 2:758549/140‑1 (MQ=255) gTGATATAGCGGCTTCCACGCGCATTTGCTGCATGCTCGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACa < 1:648395/140‑1 (MQ=255) tGATATAGCGGCTTGTACGCGCATGCGCGACATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACAt < 1:836381/140‑1 (MQ=255) tGATATAGCGGCTTGCACGCGCTTGTGCGGCTTGCTGGCCTAAAGGACCATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACAt < 2:683986/140‑1 (MQ=255) tGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACAt < 2:1418366/140‑1 (MQ=255) tGATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACAt < 2:604182/140‑1 (MQ=255) gATATAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATc < 2:1079280/140‑1 (MQ=255) atatAGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCa < 1:862938/140‑1 (MQ=255) tataGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCAc < 1:2115316/140‑1 (MQ=255) aGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTTGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCa > 2:639845/1‑140 (MQ=255) aGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCa > 1:1120795/1‑140 (MQ=255) aGCGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCa < 1:1737132/140‑1 (MQ=255) cGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCAtt > 1:2388443/1‑140 (MQ=255) cGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCAtt < 1:1826775/140‑1 (MQ=255) cGGCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCAtt < 2:1467040/140‑1 (MQ=255) cGGCTTGCACGCGCATCAGCGGGATGCTGGGATTAAGGATAATGAAACGTCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCAtt < 2:1136896/140‑1 (MQ=255) gCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTCCAAAACATACAAATAAAATAAGAACATCACTCATTAt > 1:903872/1‑140 (MQ=255) gCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACAt < 1:1302097/130‑1 (MQ=255) gCTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCATTAt < 1:1428857/140‑1 (MQ=255) cTTGCACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCATTAtc > 2:2026485/1‑140 (MQ=255) | GGCCTTACGACGTGGACTTCTCCCGGCTTCACAATGTATCGCTGTACCGACTCATAAGTGATGAACGTGGCGCTGCAATTCACGTTCTGACACTGGTGATAACGCTCTTTTGTCGTGTCAGTGATATAGCGGCTTGTACGCGCATGTGCGGCATGCTGGCATAAAGGACAATGAAACATCGCGAGCACCTCTTCCGGTTTTGTTGATGGTGCCATTTTAGTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCATTATC > NC_000913/2167342‑2167613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |