| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,258,737 | T→C | N187S (AAC→AGC) | psuK ← | putative pseudouridine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,258,737 | 0 | T | C | 99.3% | 484.0 / NA | 141 | N187S (AAC→AGC) | psuK | putative pseudouridine kinase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (71/69); minor base A (1/0); total (72/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 153 total aligned reads displayed.
GCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGAT > NC_000913/2258601‑2258867 | gCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCAGGCCCTGACAGCGCAATACCACTCAGCGTTTCCGCTTCAAGGCGGCTTg > 2:668894/1‑140 (MQ=255)gCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTg < 2:1323974/140‑1 (MQ=255) cTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTg < 1:2156147/139‑1 (MQ=255) cTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTg > 2:2156147/1‑139 (MQ=255) gTAATAAACGCCGTCGCCGCCCATGCTCAATA‑CAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCggcttggctt > 2:67604/1‑140 (MQ=255) taataaACGCCGTCGTCGCCCACGCTCAACACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCggcttggctt < 1:818856/140‑1 (MQ=255) taataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCggcttggctt < 2:1444707/140‑1 (MQ=255) taataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCggcttggctt < 1:1284137/140‑1 (MQ=255) aataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCGGGGGTTCCGCTTCAAGGCGgcttggcttg > 1:1127003/1‑140 (MQ=255) aataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGgcttggcttg > 1:2285478/1‑140 (MQ=255) ataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTga < 1:74036/140‑1 (MQ=255) ataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCAAGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTga < 1:527220/140‑1 (MQ=255) aCGCCGTCGCCGCCCTTGCTCAATACCAGGCGGTTCAAGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAgt < 1:1107932/140‑1 (MQ=255) cGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAgtg < 2:2000635/140‑1 (MQ=255) gCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAgtgt < 2:2398809/140‑1 (MQ=255) gCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGAGCAATCCCAGTCAAGGTTCCCGCTTCGAGGCGGCTTGGCTAGAGAgtgt > 2:1195197/1‑140 (MQ=255) cGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTTCGCTTCAATGCGGATTGGCTTGAGActgtct > 2:779381/1‑138 (MQ=255) cGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTgg > 1:237349/1‑140 (MQ=255) cGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTgg > 1:1749917/1‑140 (MQ=255) tCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTga < 2:19618/130‑1 (MQ=255) tCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAgtgt > 2:99473/1‑136 (MQ=255) tCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAgtgt < 1:99473/136‑1 (MQ=255) tCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGtgtgtat < 1:1715806/140‑4 (MQ=255) tCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGAt > 1:1922581/1‑140 (MQ=255) tCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGAt > 1:1277848/1‑140 (MQ=255) tCGCCGCCAATGCTCATGACCACTCGGTTCAGGTCTTGTAGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGAt < 2:1127003/140‑1 (MQ=255) cgccgcCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATc < 2:534305/140‑1 (MQ=255) tGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGa < 1:2442711/140‑1 (MQ=255) tACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcgc > 1:1807571/1‑140 (MQ=255) aCCAGTCGGTTCAGGGCATGTTCATTGAACCAGGCAGGAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcgcg < 1:867445/140‑1 (MQ=255) aCCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcgcg < 2:447180/140‑1 (MQ=255) ccAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCgcgc < 1:1979449/140‑1 (MQ=255) gTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCTAGGCGGCTAGGCATCAGAGTGTGGAACTGATTTAGACGGTCGCGCACt > 2:1093825/1‑140 (MQ=255) gTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCGAGGCGGCTAGGCGTGATAGTGTGGAACTGATTTAGACGGTCGCGCACt > 2:713538/1‑140 (MQ=255) gTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACt > 1:35430/1‑140 (MQ=255) gTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACt > 1:873591/1‑140 (MQ=255) gTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACt > 1:1392968/1‑140 (MQ=255) gTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACt > 2:377948/1‑140 (MQ=255) gTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGAGTTAGACGGTCGCGCACt > 2:1818243/1‑140 (MQ=255) gTTCAGGCCATGTTGCTGGAACAAGACAGAAACTTTTCCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGa < 1:668894/140‑1 (MQ=255) aGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcgcg < 1:287709/128‑1 (MQ=255) aGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcgcg > 2:287709/1‑128 (MQ=255) tGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTAAGACGGTCGCGCAGTTTGACACATTTCCa > 1:1036995/1‑140 (MQ=255) gTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCAt > 2:1471280/1‑140 (MQ=255) gTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCAt > 1:2184319/1‑140 (MQ=255) gTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCAt > 2:1262670/1‑140 (MQ=255) gTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGAACTGATTTGGACGGTTGCGCACTTTGACACATTTCCAt > 1:1008823/1‑140 (MQ=255) aaCCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAAc < 2:628942/140‑1 (MQ=255) aGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGa < 1:2471725/140‑1 (MQ=255) cagcaACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCg < 2:2184319/140‑1 (MQ=255) gcaACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGAc < 2:2135991/140‑1 (MQ=255) agaaCTTTTGCCACAGCTTCACTCCTTGAAAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGAc < 1:787312/138‑1 (MQ=255) caACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACa > 2:239671/1‑140 (MQ=255) caACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACa > 2:234390/1‑140 (MQ=255) ttGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACg > 2:554840/1‑140 (MQ=255) gCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACggg < 2:1392968/140‑1 (MQ=255) acaTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTAc < 2:1062046/140‑1 (MQ=255) caTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGAACTTTGACGCATGTCCCTGCCGAAATCGGAACGACAAATACGGGTAct > 2:787312/1‑139 (MQ=255) aTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGt > 1:2320037/1‑140 (MQ=255) tCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCACGCCGAAACCGGATCGACAAATACGGGTACGtt > 1:1078997/1‑140 (MQ=255) ttCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTTCATGCCGCAACCGGATCGACAAATACGGGTACGTTgg > 1:1082869/1‑140 (MQ=255) cACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTggcg < 1:1471280/140‑1 (MQ=255) cGCCCTGACAGCGCACTCCCACTCACGGTATCCGCTTTAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTggcggc < 1:713538/140‑1 (MQ=255) gCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCa < 1:2146027/140‑1 (MQ=255) gCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCa < 2:873591/140‑1 (MQ=255) gCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCa < 2:1925725/140‑1 (MQ=255) gCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCa < 1:67604/140‑1 (MQ=255) gCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCa < 1:544679/140‑1 (MQ=255) cccTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCAt < 1:377101/140‑1 (MQ=255) ccTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCAtt < 2:100351/140‑1 (MQ=255) ccTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACCGGTACGTTGGCGGCAtt > 2:1049915/1‑140 (MQ=255) gACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATc > 2:2098951/1‑140 (MQ=255) cAGCGCAATCCCTCTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCa < 2:1492557/140‑1 (MQ=255) cAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCa < 2:1807571/140‑1 (MQ=255) cAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCa < 1:2098951/140‑1 (MQ=255) cgcAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACATATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGaa > 1:2181609/1‑140 (MQ=255) cgcAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCa > 2:1626628/1‑130 (MQ=255) cgcAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCa < 1:1626628/130‑1 (MQ=255) cgcAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGaa > 2:1344374/1‑140 (MQ=255) cAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATc > 1:1528026/1‑140 (MQ=255) aaTCCCACTCAGGGTCTCCGCTTCATGGCAGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATcc < 1:719049/140‑1 (MQ=255) aaTCCCACTCAGGGATTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATcc < 1:257131/140‑1 (MQ=255) ccACTCAGGGTTTCCCCTTCAATGCGGCTAGGCTTGATAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGc < 1:898758/140‑1 (MQ=255) aGGGTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGc < 2:425174/140‑1 (MQ=255) ggTTTCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGTCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCct > 1:200052/1‑140 (MQ=255) tCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATcc > 1:315653/1‑124 (MQ=255) tCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATcc < 2:315653/124‑1 (MQ=255) tCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTc < 2:2320037/140‑1 (MQ=255) tCCGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTc > 2:540471/1‑140 (MQ=255) cGCTTCAAGGCGGCTTGGCTTGTGAGTGTGGGTCTGATTTAGACGGTCTCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCAc < 2:857337/140‑1 (MQ=255) cGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCAc < 1:377948/140‑1 (MQ=255) cGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCAc < 2:1699148/140‑1 (MQ=255) cGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCAc < 1:1670657/140‑1 (MQ=255) cGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCAc < 1:2089649/140‑1 (MQ=255) cGCTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCAc < 2:161576/140‑1 (MQ=255) cGCTTCAAGGCGGCTTGACTTGGGAGTGTGGATCTGATTTAGACGGTCTCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCAc < 2:752025/140‑1 (MQ=255) cGCTTCAAGGCGGCTCGGCTTGTGACTGTAGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCAc < 1:721235/140‑1 (MQ=255) cTTCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTg < 1:1511762/140‑1 (MQ=255) cTTCAAGGAGGCTTGGCTTGAGAGTGTGGATCTAATTTAGACGGTAGCGTAGTTTGACAGATTTCAATGCCGATACCTGAACGACAAATACGGGTGCGTTGGCGGCGTTATCCAGAATCCATGCCAGTGGCTCTTCTCTg < 2:200052/140‑1 (MQ=255) tCAAGGCGGCTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGat > 1:1877743/1‑140 (MQ=255) | GCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTCCATGCCGAAACCGGATCGACAAATACGGGTACGTTGGCGGCATTATCCAGAATCCATGCCAGTGCCTCTTCACTGAT > NC_000913/2258601‑2258867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |