| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 293,637 | T→C | Q94Q (CAA→CAG) | yagL ← | CP4‑6 prophage; resolvase‑like catalytic domain‑containing protein YagL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 293,637 | 0 | T | C | 99.7% | 1014.6 / NA | 286 | Q94Q (CAA→CAG) | yagL | CP4‑6 prophage; resolvase‑like catalytic domain‑containing protein YagL |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (117/167); minor base G (1/0); total (119/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 296 total aligned reads displayed.
TAAACATTTCTTTTTGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGTTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGG > NC_000913/293501‑293770 | tAAACATTTCTTTTTGTAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGc > 2:907816/1‑140 (MQ=255) aaaCATTTCTTTTTGAAGGCAATAAAATAAAATATACTGGAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACgctgct < 2:817535/140‑1 (MQ=255) aaaCATTTCTTTTTGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACgctgct > 2:2489492/1‑140 (MQ=255) aaaCATTTCTTTTTGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACgctgct < 2:120171/140‑1 (MQ=255) aaaCATTTCTTTTTGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACgctgct < 2:49911/140‑1 (MQ=255) tttCTTTTTGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGaa > 2:1970426/1‑140 (MQ=255) tttCTTTTTGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGaa > 2:609039/1‑140 (MQ=255) tCTTTTTGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTGCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAaac > 2:1559648/1‑140 (MQ=255) tCTTTTTGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAaac < 2:2222985/140‑1 (MQ=255) tCTTTTTGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAaac > 1:2226054/1‑140 (MQ=255) ttttGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAaacaac < 2:19460/140‑1 (MQ=255) ttttGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAaacaac < 2:2314044/140‑1 (MQ=255) ttttGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAaacaac < 1:568904/140‑1 (MQ=255) ttttAAAGGCAAAAAAAAAAAATATCCT‑TTAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAAcc < 1:1259207/140‑1 (MQ=255) tttGAAGGCAAAAAAATAAAATCTTGTGTCAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAAcc < 1:901133/140‑1 (MQ=255) tGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACctc > 2:1737288/1‑140 (MQ=255) tGAAGGCAAAAAAATAAAATATTCTGT‑AGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGAAAAGCCGGGCCCGCCGGTTCATTTTATGATTAATCAATTGTCTTGGTAAACGCTGCTCTGAAACAACctct > 2:1259207/1‑140 (MQ=255) aaGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCtt < 1:1500352/140‑1 (MQ=255) aaGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCtt < 1:79840/140‑1 (MQ=255) aaGGCAAAAAAATAAAACATTCAGTAAGTCCGCCACAGTCCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCtt < 2:1045861/140‑1 (MQ=255) aGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTTATGATGAATCAAGTGTCTGAGTAAAAGCTGATCTGAAACAACCTCttt > 2:756098/1‑140 (MQ=255) ggCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTa < 1:2243972/140‑1 (MQ=255) cAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAat > 2:1809145/1‑140 (MQ=255) aaaataaaatATTCTCTAAGTCGTCCACAGTTCTGCCCAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCt < 1:634001/140‑1 (MQ=255) aataTTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCt < 1:27417/140‑1 (MQ=255) tCTGTAAGTCCTCCACGTTTCTGCCAAGACAGCTTCGATCTGGAATGATAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATc < 2:1101983/140‑1 (MQ=255) tCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATc > 2:534292/1‑140 (MQ=255) tCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATc > 1:304608/1‑140 (MQ=255) gTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACAt > 1:172556/1‑140 (MQ=255) cctccACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGGTGCTCTGAAACAACCTCTTTAATATTTACCTGCTCGATCACAACATGt > 2:982709/1‑140 (MQ=255) cctccACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTAcc > 1:1864831/1‑122 (MQ=255) ctccACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGATTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGtt > 1:425855/1‑140 (MQ=255) tccACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCacaa > 2:569925/1‑133 (MQ=255) tccACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTc < 1:609039/140‑1 (MQ=255) tccACAGTTCTGCCAAGACAGCATAGATCTGTAATAACATGCGTGTCTCGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTc < 2:726853/140‑1 (MQ=255) ccACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCa > 2:1276963/1‑140 (MQ=255) agctCTGCCAAGACAGCCTAGACCTGGAATGGCTATCGTCTCCTGCCGTTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTa < 2:1087938/137‑1 (MQ=255) aGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTa < 1:1478871/140‑1 (MQ=255) aGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTa < 1:1971116/140‑1 (MQ=255) gTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAg < 2:304608/140‑1 (MQ=255) ttCTGCCAAGACAGCTTAGATCTGGAATGACAAGTGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGa > 1:586012/1‑140 (MQ=255) ttCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCacaaca > 2:2041092/1‑128 (MQ=255) ttCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCacaaca < 1:2041092/128‑1 (MQ=255) ttCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGa > 2:281762/1‑140 (MQ=255) ttCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTCAATATCTTCCTACTCGATCACAACATGTTCAGGTAGa > 1:1183975/1‑140 (MQ=255) ttCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCATTATTATGTACCTGCTAGATCCCAACATGTTCAGGTAGa > 2:865035/1‑140 (MQ=255) cTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATg > 1:2327671/1‑128 (MQ=255) tGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAg < 2:1017867/136‑1 (MQ=255) tGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAg > 1:1017867/1‑136 (MQ=255) ccAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATAtt > 1:1830974/1‑140 (MQ=255) ccAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATAACTACCTGTTCGATCACAACATGTTCAGGTAGAATAtt > 1:1081718/1‑140 (MQ=255) aGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTaaa > 2:2279788/1‑140 (MQ=255) aCAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACGTGCTCGATCACAACTTGTTCAGGTAGAATATTAAAtt > 1:931731/1‑140 (MQ=255) aCAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAAtt > 1:2480759/1‑140 (MQ=255) aCAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAAtt > 2:2006715/1‑140 (MQ=255) gCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAAttttt > 1:180906/1‑140 (MQ=255) gCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAAttttt > 2:237030/1‑140 (MQ=255) ttAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAAtt < 2:2430674/135‑1 (MQ=255) ttAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAAtt > 1:2430674/1‑135 (MQ=255) aGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCa < 1:2415413/140‑1 (MQ=255) gATCTGGAATGACAAGTATGTCGTGCCGGTTCACTCCATGATGAATCATTTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCat < 2:1064676/140‑1 (MQ=255) tGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATAtct < 2:1405878/140‑1 (MQ=255) gAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAAGATGTTCAGGTATAACATTAAAGTTTTGGCATATCTCa > 1:1148278/1‑140 (MQ=255) gAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCa > 1:2385669/1‑140 (MQ=255) gAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCa > 2:1668042/1‑140 (MQ=255) aaTGACAAGCGTGTCGTGCCGGTTCGTTTAATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAg < 1:1047610/140‑1 (MQ=255) aaTGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAg < 1:1400170/140‑1 (MQ=255) aCAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAag > 2:1718309/1‑140 (MQ=255) aCAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAag > 1:2004682/1‑140 (MQ=255) aCAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAag > 2:2093825/1‑140 (MQ=255) gCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAagtgag < 2:1373695/140‑1 (MQ=255) cGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCaa < 2:43049/134‑1 (MQ=255) cGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAagtgagt > 2:2291233/1‑140 (MQ=255) cGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAagtga > 1:1352014/1‑138 (MQ=255) gtgtCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAagtgagtg < 1:2279788/140‑1 (MQ=255) tCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGtgatg < 1:2291233/140‑1 (MQ=255) tCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGtgatg > 2:1467474/1‑140 (MQ=255) tCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGtgatg < 2:590330/140‑1 (MQ=255) tCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGtgatg < 1:1668042/140‑1 (MQ=255) ttcatttcatGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAAt > 2:2455504/1‑140 (MQ=255) ttcatttcatGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATGTTTGGCAGATCGCAACAAGTGGGTGATGATCTGTAAt > 1:670870/1‑140 (MQ=255) tcatttcatGATGAATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATg < 1:2455504/140‑1 (MQ=255) tgatgaATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTg < 1:390079/140‑1 (MQ=255) atgaATCAATTGTCTGAGTAAATGCTGCTCTGAAACATCCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCt < 1:826587/140‑1 (MQ=255) gaATCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGt > 2:2418237/1‑140 (MQ=255) aaTCAATTGTCTGAGTAAACGCTGTTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGtt < 1:250398/140‑1 (MQ=255) aaTCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGtt < 2:1830974/140‑1 (MQ=255) aaTCAATTGTCTGAGAAAACGCTGCCCTGTAACAACCCCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGtt < 1:719824/140‑1 (MQ=255) aTCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTc > 1:2183559/1‑140 (MQ=255) tCAATTGTCTGAGTAAACGCTGTTCTGAAACCACCACTTCAATATCTATCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCg < 2:670870/140‑1 (MQ=255) tCAATTGTCTGAGTAAACGCTGGTCGGAAACAACCTCCTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCg < 1:865035/140‑1 (MQ=255) tCAATTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCg < 2:2480759/140‑1 (MQ=255) aaTTGTCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCt < 1:1539771/140‑1 (MQ=255) tCTGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGtt > 2:401597/1‑131 (MQ=255) tGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGGTCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCt > 2:1591503/1‑133 (MQ=255) tGAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCt < 1:1591503/133‑1 (MQ=255) gAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCata < 1:174462/140‑1 (MQ=255) gAGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCata < 1:52441/140‑1 (MQ=255) aGTAAACGCTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCatat < 2:2152147/140‑1 (MQ=255) gTAAACGCTGCTCTGTAACAACTTCGTTATTATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATg < 1:982943/140‑1 (MQ=255) | TAAACATTTCTTTTTGAAGGCAAAAAAATAAAATATTCTGTAAGTCCTCCACAGTTCTGCCAAGACAGCTTAGATCTGGAATGACAAGCGTGTCCTGCCGGTTCATTTCATGATGAATCAATTGTCTGAGTAAACGTTGCTCTGAAACAACCTCTTTAATATCTACCTGCTCGATCACAACATGTTCAGGTAGAATATTAAATTTTTGGCATATCTCAGCAAGTGAGTGATGATCTGTAATGCTTTCTTGCTGTTCGCTACTGCATATGG > NC_000913/293501‑293770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |