| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,526,791 | A→G | R22R (CGT→CGC) | yfeR ← | putative LysR‑type DNA‑binding transcriptional regulator YfeR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,526,791 | 0 | A | G | 99.2% | 469.0 / NA | 133 | R22R (CGT→CGC) | yfeR | putative LysR‑type DNA‑binding transcriptional regulator YfeR |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (64/68); total (65/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 136 total aligned reads displayed.
AAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCAT > NC_000913/2526654‑2526927 | aaaGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGcgcg > 2:47497/1‑140 (MQ=255) gCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACt < 2:2471541/140‑1 (MQ=255) ccAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTa < 1:1526994/140‑1 (MQ=255) cAGCTGCTGCCCTGCCTCTGTAAGCACCATTTCACGCCTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTaa < 1:1121390/140‑1 (MQ=255) cAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTaa > 1:2165343/1‑140 (MQ=255) cAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTaa < 1:2458904/140‑1 (MQ=255) cAGCTGCTGCCCTGCATCTGTAAGCACCACTACACCCGTAGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGAccaa < 2:938640/140‑4 (MQ=255) aGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTaaa > 2:1733204/1‑140 (MQ=255) ccTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTtctc < 2:1971630/140‑1 (MQ=255) ccTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTtctc < 1:7405/140‑1 (MQ=255) gCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTg < 1:421503/140‑1 (MQ=255) gCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAG‑TCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTgc > 2:2253668/1‑140 (MQ=255) gtCTGTAAGCACCACTTCACGCTTGGTTCTGTCTATCAGTCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTgcg < 2:1124190/139‑1 (MQ=255) aTCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTgcg < 1:1372020/140‑1 (MQ=255) gtgaGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCTAGTTCGTTCGCACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGTGCGACTAAAACTTTTCTCCTGCGCTAc > 2:1429100/4‑140 (MQ=255) gTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATATGCTCTCCTGCGAGAATAAAACTTTTCTCCTGCGCTAc > 1:956620/1‑140 (MQ=255) gTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGGGACTAAAACATTTCTCCTGCGCTAc > 1:960430/1‑140 (MQ=255) gTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCACAGGCCGATACGCTCTACTGCGCGATTAAACCTTTTCTCCTGCGCTAc > 2:871236/1‑140 (MQ=255) tAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACt < 1:1848583/140‑1 (MQ=255) tAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACt > 1:182928/1‑140 (MQ=255) caccacTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGa > 2:408594/1‑140 (MQ=255) accacTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGAc > 2:1576775/1‑140 (MQ=255) cacTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGa > 1:967811/1‑140 (MQ=255) cacTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGa > 2:1935113/1‑140 (MQ=255) cacTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGa < 2:2109393/140‑1 (MQ=255) cTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGaaa < 2:1757415/140‑1 (MQ=255) cTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGaaa < 1:47497/140‑1 (MQ=255) ttCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGaaaa > 2:91072/1‑140 (MQ=255) ttCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGaaaa > 2:1702173/1‑140 (MQ=255) ttCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTATCCTGCTCTACTGTGACGaaaa > 1:814994/1‑140 (MQ=255) gTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTaa < 1:1059672/140‑1 (MQ=255) gTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTaa < 1:581598/140‑1 (MQ=255) gTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAACACTATTCTCCTGCGCTTCTGTAACGAAAACCTTTAATTg > 2:1001499/1‑140 (MQ=255) gTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTg > 2:2213228/1‑140 (MQ=255) gTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTg < 1:1869988/140‑1 (MQ=255) gTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTg > 2:1107373/1‑140 (MQ=255) gTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGaa > 1:1342450/1‑123 (MQ=255) gTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGaa < 2:1342450/123‑1 (MQ=255) gTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTa < 1:2004951/140‑1 (MQ=255) cagcagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAg < 1:2401197/140‑1 (MQ=255) agcagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGa > 1:2303969/1‑140 (MQ=255) cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGTCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGaat > 2:2259085/1‑140 (MQ=255) cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAATTTTTCTCCTGCGCTACAGTGACGAATACCTGTAATTGTTTTAAAGaat > 2:714795/1‑140 (MQ=255) cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTaa > 1:2040256/1‑126 (MQ=255) cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTaa < 2:2040256/126‑1 (MQ=255) cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTGAAGaat < 2:2165343/140‑1 (MQ=255) cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGaat > 1:1060355/1‑140 (MQ=255) cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGaat > 2:2365318/1‑140 (MQ=255) cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGaat > 1:1220492/1‑140 (MQ=255) cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGAGCTACTGAGACTAATACCTTTGATTGTTTTAAAGaat > 1:1152962/1‑140 (MQ=255) ggCGAACACCAGTATGAATTTCCAGTTCCTTCACAGTGTTACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGaataa < 2:812778/140‑1 (MQ=255) gAACACAAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCGACTATGACGAAAACCTTTAATAGTTTTAAAGAATAATTc > 2:1047787/1‑140 (MQ=255) acacCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCAt < 1:1107373/140‑1 (MQ=255) aGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAg > 2:166525/1‑125 (MQ=255) aGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAg < 1:166525/125‑1 (MQ=255) tATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGtttt < 1:1991793/140‑1 (MQ=255) ttttCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTttc < 1:1396720/136‑1 (MQ=255) ttCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGGCGAAAACCATTAGTTGGTTTAAAGAGTAATGCATCTGTTTTCTTCATg > 2:692999/1‑140 (MQ=255) ttCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATg > 2:219846/1‑140 (MQ=255) ttCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATg > 2:455422/1‑140 (MQ=255) ttCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATg > 2:177776/1‑140 (MQ=255) tCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGa < 1:408594/140‑1 (MQ=255) tCCAGTTCCTTCACACTGTGACCCAATGCTGACTGGCCCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGa < 1:692999/140‑1 (MQ=255) gagacagttCACACTCTGACTCCCTCCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAAt < 1:687643/133‑1 (MQ=255) ttCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGa < 1:151896/140‑1 (MQ=255) ttCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGa < 2:2232874/140‑1 (MQ=255) ttCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGa < 1:1221071/140‑1 (MQ=255) ttCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGa < 1:2310451/140‑1 (MQ=255) ttCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCa < 2:1293514/140‑1 (MQ=255) tCACACTGCGACTCACTACCGACTGGCTCACGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCaa < 2:1152962/140‑1 (MQ=255) cacaCTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAAt < 2:2303969/140‑1 (MQ=255) acacTGTGACTCACTTCCGACTTGCGCAGTCCGATACCCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATa < 1:871236/140‑1 (MQ=255) cTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCTTCTGTTTTCTTCATGAATGGATGCAATAAAt > 2:149580/1‑140 (MQ=255) cTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAAt > 1:1590196/1‑140 (MQ=255) tgtgACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGTGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATc < 1:1429100/140‑1 (MQ=255) tgACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCaa > 1:2144539/1‑140 (MQ=255) tgACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTGTAAAGAATCATTAACCCGTTTTCTTCATGAACGGATGCAATAAATCaa > 2:1076073/1‑140 (MQ=255) gACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAAt > 2:1499419/1‑140 (MQ=255) aCTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTGAAGAATAATTCAGCTGATTTCTTCAAGAATAGATGCAATaactgtctc > 2:687643/1‑133 (MQ=255) tCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAAtttt < 2:1060355/140‑1 (MQ=255) aCTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATc < 1:604050/132‑1 (MQ=255) tGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTAttt > 2:1579983/1‑140 (MQ=255) tGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTAttt > 2:1545670/1‑140 (MQ=255) tGCCGACTGGCTCAGGCCGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTAttt > 2:1607937/1‑140 (MQ=255) gACTGGCTCAGGCCGATACGCTCTCGTGCTCGACTAAGACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCa < 1:1047787/140‑1 (MQ=255) ccGATACGCTCTCCTTCGCGACAAACACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGaagaag < 1:1123936/140‑1 (MQ=255) ccGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGaagaag < 1:219846/140‑1 (MQ=255) ccGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGaagaag < 1:1579983/140‑1 (MQ=255) cGATACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGc < 1:177776/140‑1 (MQ=255) aTACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGcac > 1:1823318/1‑140 (MQ=255) aTACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGcac > 2:109965/1‑140 (MQ=255) aTACGCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGcac > 2:1433916/1‑140 (MQ=255) gCTCTCCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATa < 2:2144539/140‑1 (MQ=255) gCTCTCCTGCGCGACCAAAACTTTTCTCCGGCGCTACCGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATa < 1:806998/140‑1 (MQ=255) tctcCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATTGATGCAATGAATTAATATTATTTCTCAAACTGGAAGAAGCACAATAGa > 2:806998/1‑140 (MQ=255) tctcCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGa < 1:1545670/140‑1 (MQ=255) tctcCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAA‑TTTATTTCTCAAACTGGAAGAAGCACAATAGaa > 1:269397/1‑140 (MQ=255) ctcCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAGAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGaa > 2:1259044/1‑140 (MQ=255) ctcCTGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGaa < 1:2253668/140‑1 (MQ=255) tGCGCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCAt < 1:1433916/140‑1 (MQ=255) | AAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCAT > NC_000913/2526654‑2526927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |