| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,552,558 | T→C | D69D (GAT→GAC) | amiA → | N‑acetylmuramoyl‑L‑alanine amidase A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,552,558 | 0 | T | C | 99.3% | 497.3 / NA | 142 | D69D (GAT→GAC) | amiA | N‑acetylmuramoyl‑L‑alanine amidase A |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (59/82); minor base A (1/0); total (60/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 148 total aligned reads displayed.
ACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCAC > NC_000913/2552424‑2552691 | aCGTTGTCAGGAATGACGCAAGCCACCGCAAAAGACGTACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCgg < 1:854349/140‑1 (MQ=255) cGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGa > 2:1283752/1‑140 (MQ=255) gTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGa > 1:216500/1‑140 (MQ=255) gTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCACGATCCAGGTCATGGCGCAATTGACACCGGAGCGa > 2:933634/1‑140 (MQ=255) cAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATc < 1:1918830/140‑1 (MQ=255) gAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGa > 2:517164/1‑140 (MQ=255) gTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCa > 1:2375651/1‑140 (MQ=255) gTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCa > 2:156844/1‑140 (MQ=255) gTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCa > 1:1259611/1‑140 (MQ=255) tCGCAAGCCATCGCCGAAGACGCACGTTTGAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCaa < 1:1023630/140‑1 (MQ=255) cGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGa < 2:2464350/125‑1 (MQ=255) cGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAAc > 2:323614/1‑140 (MQ=255) cGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAAc > 1:1488658/1‑140 (MQ=255) cGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAAc > 2:2417705/1‑140 (MQ=255) aGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGtt < 1:517164/140‑1 (MQ=255) gCCATCGCCAAAGACGAACTTTAAAAAACCAACAACGGAAACAGCAAGGCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTc < 2:989522/140‑1 (MQ=255) cATCGCCAAAGACGAACTTTTAAAAGCCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCga < 1:1072738/140‑1 (MQ=255) cATCGCCAAAGACGAACTTTTAAAAACCAGCTACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCga < 2:1135931/140‑1 (MQ=255) cATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCga < 1:1755263/140‑1 (MQ=255) aTCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCgaa < 1:2294917/140‑1 (MQ=255) aTCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCgaa < 1:334813/140‑1 (MQ=255) aTCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCgaa < 1:2353919/140‑1 (MQ=255) aTCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCgaa < 1:1522607/140‑1 (MQ=255) tCGCCAAAGACGAACTTTTAAAAACCAGCAATGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCgaaa > 2:1515075/1‑140 (MQ=255) tCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGGGCGATCGGACGCAACGGTTCgaaa > 2:560166/1‑140 (MQ=255) tCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCgaaa > 1:2214519/1‑140 (MQ=255) gCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCgaaaga < 1:1283752/140‑1 (MQ=255) gCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCgaaaga < 1:1710316/140‑1 (MQ=255) gCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCgaaaga < 2:89445/140‑1 (MQ=255) aCGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACAt < 1:2474988/140‑1 (MQ=255) cGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACAtg < 2:1422001/140‑1 (MQ=255) cGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACAtg < 2:4319/140‑1 (MQ=255) cGAACTTTGAAAAACCTACAACTGACACAGCCATCTGAATGCCAAAAACTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACAtg < 2:1181665/140‑1 (MQ=255) aaaaaCCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTgg < 1:277638/140‑1 (MQ=255) aCCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGAt < 2:2375651/140‑1 (MQ=255) aCCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGAt < 2:1259611/140‑1 (MQ=255) gCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGc < 2:2043316/139‑1 (MQ=255) gCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGc > 1:2043316/1‑139 (MQ=255) gCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACAGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCt > 2:962991/1‑140 (MQ=255) aCGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAATGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTaaa > 2:275742/1‑140 (MQ=255) aGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCACCGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCg > 2:991391/1‑140 (MQ=255) aGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGGTGGCGATTGCTAAAAACGTCCg > 2:1085773/1‑140 (MQ=255) cAAGCCGAAGTCCGAAACACCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGtt < 2:2291832/140‑1 (MQ=255) gCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCa > 2:511846/1‑140 (MQ=255) ccGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCAt < 2:1474872/140‑1 (MQ=255) ccGAAAGCCAAAAAAGCTGGCGTCATACGGGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCAt < 1:1157536/140‑1 (MQ=255) aaGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGTTGCAGGCGATTGGTAAAAACGTCCGTTCCATTTTg > 2:966053/1‑140 (MQ=255) aGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGc < 1:2493070/140‑1 (MQ=255) gCCAAAAAATCTGGCGGTAAACCTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCg < 2:705253/140‑1 (MQ=255) gCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAATATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCg < 2:475332/140‑1 (MQ=255) ccAAAAAATCTGGCGTCAAACGGGTAGTTGTTCTCGAACCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGt < 1:997983/140‑1 (MQ=255) aaaTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCa < 1:1915196/140‑1 (MQ=255) aaaTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCa < 2:1342364/140‑1 (MQ=255) aaaTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGAACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCa < 1:1356335/140‑1 (MQ=255) cTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATggg > 2:1691981/1‑140 (MQ=255) tGGCTGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGa > 1:1432109/1‑140 (MQ=255) tGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCa > 2:1558087/1‑135 (MQ=255) tGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGa > 2:1788471/1‑140 (MQ=255) tGGCGGCAAACGTGTAGTTGTTATCTATCCAGGTCACAGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGa < 1:1168942/140‑1 (MQ=255) ggcggcAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAATAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGAt < 2:2454686/140‑1 (MQ=255) cAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATg < 2:199648/140‑1 (MQ=255) cAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATg > 1:2302490/1‑140 (MQ=255) cAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATg < 1:153291/140‑1 (MQ=255) cAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATg < 1:98495/140‑1 (MQ=255) cAAACGTGTCGTTGTACTCGATCCATGTCTCGGCGGAGTTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATg < 1:1012385/140‑1 (MQ=255) aCGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATgcgc > 1:205806/1‑140 (MQ=255) cGTTGTTCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGATCCATTTAGCGAAAGCATGGGGTTGATGCGCGTTTaa > 1:706313/1‑140 (MQ=255) gttCTCGATCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAAcgcg > 2:1348146/1‑140 (MQ=255) tctcGATGCAGGACACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGtt < 1:1886552/140‑1 (MQ=255) tctcGATCCAGGTCACGTCGGAATTGACACCGGAGCGATAGGACGCAAAGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGtt < 2:744236/140‑1 (MQ=255) aTCCAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGc < 1:1691981/140‑1 (MQ=255) ccAGGTCCCGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGa < 2:163043/140‑1 (MQ=255) ccAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGa < 1:1788471/140‑1 (MQ=255) cAGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGAt < 1:1348146/140‑1 (MQ=255) aGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGTTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATa > 2:59363/1‑140 (MQ=255) aGGTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATa > 1:1808034/1‑140 (MQ=255) ggTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATAc < 1:2417705/140‑1 (MQ=255) ggTCACGGCGGAATTCACACCGGAGGGATAGGACGCATCGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATAc < 1:799467/140‑1 (MQ=255) gTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACg > 2:224857/1‑140 (MQ=255) gTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACg > 2:268036/1‑140 (MQ=255) gTCACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACg > 2:1473368/1‑140 (MQ=255) cACGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGtt < 1:1473368/140‑1 (MQ=255) aCGGCGGAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCATTAAACGCGATCTGGCGATACGttt > 1:679426/1‑140 (MQ=255) cggcggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTa < 1:156844/140‑1 (MQ=255) ggcggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGtt > 1:2441121/1‑124 (MQ=255) ggcggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCTATACGTTTAt > 2:2136810/1‑140 (MQ=255) ggcggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTAt > 2:183651/1‑140 (MQ=255) ggcggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTAt > 1:273289/1‑140 (MQ=255) ggcggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGGTTAACGCGGTCTGGGGATACGTTTAt > 2:1530078/1‑140 (MQ=255) ggcggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCCCGTGTAGCGCGTTGTGGCGATACGTTTAt > 1:660621/1‑140 (MQ=255) ggcggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGAGATGGATTCGCGTTTAACGCGTTCTGGCGACACGTTTAt > 2:1172255/1‑140 (MQ=255) cggAATTGACACCGGAGCGATCTGACGCAACTGTTCGAACGAAAAACACGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATcc < 2:679426/140‑1 (MQ=255) cggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATcc < 1:1480239/140‑1 (MQ=255) cggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATcc < 1:1298207/140‑1 (MQ=255) cggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATcc < 1:1252296/140‑1 (MQ=255) cggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATcc < 1:56951/140‑1 (MQ=255) cggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATcc < 2:1432109/140‑1 (MQ=255) cggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATcc < 1:511846/140‑1 (MQ=255) cggAATTGACACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATcc < 1:353652/140‑1 (MQ=255) gAATTGACACCGGAGTGATCGGGCGTAACTGTTCGAACGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCa < 1:991391/140‑1 (MQ=255) | ACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCAC > NC_000913/2552424‑2552691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |