BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,754,863	T→C	intergenic (‑99/‑33)	ratA ← / → smpB	ribosome association toxin RatA/SsrA‑binding protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,754,863	0	T	C	100.0%	423.6 / NA	119	intergenic (‑99/‑33)	ratA/smpB	ribosome association toxin RatA/SsrA‑binding protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (66/53); total (66/53)

Only 100 of 125 total aligned reads displayed.

ACAATTTCCATCAACAAAAATCCAACAAATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGC  >  NC_000913/2754727‑2754999

aCAATTTCCATCAACTAAAATCAAATAAACAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGa                                                                                                                                       <  1:1053027/140‑1 (MQ=255)

   aTTTCCATCAACAAAAAACCAACAAATAATACCATCTATCCTGCTGTATAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGAttt                                                                                                                                    <  2:731653/140‑1 (MQ=255)

     ttCCATCAACAAAAATCCAACAAATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCa                                                                                                                                  >  2:408749/1‑140 (MQ=255)

      tCCATCAACAAAAATCCAACAAATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAg                                                                                                                                 >  1:472373/1‑140 (MQ=255)

      tCCATCAACAAAAATCCAACAAATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTCGTCACCCACAGGATTGGTATGAGGTGTTTCCGATTTCAg                                                                                                                                 >  2:717285/1‑140 (MQ=255)

        cATCAACAAAAATCCAACAAATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGAt                                                                                                                               >  1:1802269/1‑140 (MQ=255)

            aacaaAAATCCAACAAATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTAcc                                                                                                                           >  2:1751970/1‑140 (MQ=255)

              caaAAATCCAACAAATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCga                                                                                                                         >  2:55299/1‑140 (MQ=255)

               aaaaaTCCAACAAATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCgat                                                                                                                        <  2:559569/140‑1 (MQ=255)

                     ccAACAAATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCa                                                                                                                  <  1:322731/140‑1 (MQ=255)

                      caacaaATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCac                                                                                                                 <  2:1753844/140‑1 (MQ=255)

                       aacaaATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCacg                                                                                                                <  1:1751970/140‑1 (MQ=255)

                       aacaaATAATATCATGTATCCTTCTCTAAGAAAAACGGTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCacg                                                                                                                <  1:1079847/140‑1 (MQ=255)

                        acaaATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCacga                                                                                                               <  1:1460567/140‑1 (MQ=255)

                         caaATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCa                                                                                                                  <  2:1748868/136‑1 (MQ=255)

                                tatCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTGTCCGATTTCAGCTTGCCGATGCTTCACGACGCTTATg                                                                                                       >  1:1161205/1‑140 (MQ=255)

                                   gaTTTATCCTGCTGTAAAAAAATCGCTATCCCGGCTCTGGGTAACAACAGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACg                                                                                                    <  2:946741/139‑1 (MQ=255)

                                   cATTTATCCTGCTGTAACAAAAGCGCTATCCCGGCGCTGAGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACg                                                                                                    <  2:1126536/140‑1 (MQ=255)

                                   cATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACg                                                                                                    <  2:1395494/140‑1 (MQ=255)

                                     tttATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACgaa                                                                                                  >  1:2395319/1‑140 (MQ=255)

                                     tttATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACgaa                                                                                                  <  1:1762276/140‑1 (MQ=255)

                                       tATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCACGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACgaaga                                                                                                <  2:1788829/140‑1 (MQ=255)

                                          ccTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGaaaa                                                                                             >  1:2489777/1‑140 (MQ=255)

                                           ctgctgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGaaaaa                                                                                            <  2:2108086/140‑1 (MQ=255)

                                            tgctgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGaaaaaa                                                                                           >  2:1940181/1‑140 (MQ=255)

                                             gctgTAAAAAAAACGCTCTCCCGGCGCTGGGAAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAg                                                                                          <  2:880230/140‑1 (MQ=255)

                                             gctgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAg                                                                                          <  1:1940181/140‑1 (MQ=255)

                                              ctgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTa                                                                                                         <  1:2162826/124‑1 (MQ=255)

                                              ctgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTa                                                                                                         >  2:2162826/1‑124 (MQ=255)

                                              ctgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGc                                                                                         >  2:1491686/1‑140 (MQ=255)

                                              ctgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGc                                                                                         >  2:582118/1‑140 (MQ=255)

                                              ctgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCAGATTTCAGCTTACCGATGATTCACGCCGCTAATGACGAAGAAAAAAGc                                                                                         >  2:879376/1‑140 (MQ=255)

                                              ctgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCAGATTTCAGATTAGCGATGATTCACGGCGCTTCTGACGAAAAAAAAAGc                                                                                         >  2:1201062/1‑140 (MQ=255)

                                               tgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTCCCGATGAGTCACGACGCTTATGACGAAGAAAAAAGcc                                                                                        >  1:946741/1‑139 (MQ=255)

                                               tgTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGca                                                                                        >  2:301342/1‑140 (MQ=255)

                                                 tAAAAAAAACGCTATCCCGGCGTTGTGTAACATCGGGCTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGcaca                                                                                      <  1:717285/140‑1 (MQ=255)

                                                  aaaaaaaaCGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACAt                                                                                     <  2:2395319/140‑1 (MQ=255)

                                                  aaaaaaaaCGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACAt                                                                                     <  1:582118/140‑1 (MQ=255)

                                                           gCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGt                                                                            <  1:1305696/140‑1 (MQ=255)

                                                                    gcgcTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGAcc                                                                   >  1:172904/1‑140 (MQ=255)

                                                                     cgcTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCa                                                                  <  1:1491686/140‑1 (MQ=255)

                                                                      gcTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCAt                                                                 <  2:2489777/140‑1 (MQ=255)

                                                                      gcTGGGTAACATCGGATTCATGCTACGATCGAGCCTTCTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCAt                                                                 <  1:657519/140‑1 (MQ=255)

                                                                         gggTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATcgc                                                              >  1:222600/1‑140 (MQ=255)

                                                                         gggTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATcgc                                                              >  2:1879748/1‑140 (MQ=255)

                                                                          ggcaaCATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGGGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGATCAGCGACCATcgcg                                                             >  1:239074/4‑140 (MQ=255)

                                                                                    ggTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAgc                                                   >  1:2175373/1‑140 (MQ=255)

                                                                                    ggTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAgc                                                   >  1:122021/1‑140 (MQ=255)

                                                                                    ggTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAgc                                                   >  2:2370461/1‑140 (MQ=255)

                                                                                    ggTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAACACATTATCCTGGTTCAGCGAACATCGCGCTTAACAAgc                                                   >  2:1121947/1‑140 (MQ=255)

                                                                                       tCATGCTAGGATAGAGGTTTGTTCCCCGCAGGACTCATACGGGGTGTTCCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAgcgcg                                                <  2:1161205/140‑1 (MQ=255)

                                                                                       tCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAgcgcg                                                <  1:1335879/140‑1 (MQ=255)

                                                                                        cATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAgcgcgc                                               <  2:239074/140‑1 (MQ=255)

                                                                                         aTGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAgcgcg                                                >  2:2481010/1‑138 (MQ=255)

                                                                                         aTGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAgcgcg                                                <  1:2481010/138‑1 (MQ=255)

                                                                                          tGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGccc                                             <  2:222600/140‑1 (MQ=255)

                                                                                          tGCTAAGATAGAGCCATGTCCCCCGGAGGATTGATATAGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGccc                                             <  1:879376/140‑1 (MQ=255)

                                                                                            ttAAGATAGAGCTTTGTCCCCCCCAAGATTGATATGGTGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGt                                           <  1:841106/139‑1 (MQ=255)

                                                                                                 aTAGAGCCTTGTCCCCCGCAGGATTCATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGa                                      <  1:883596/140‑1 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAATCCTGGTTCAGCGGCCAGCGCGCTTAACAAGGGCGCCCGTCACGAATAc                                  >  2:660844/1‑140 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCTGCGACCAACGCGCTTAACAAGTGCGCCCGTCACGAATAc                                  >  2:883596/1‑140 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGccc                                             >  2:2094734/1‑129 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGccc                                             <  1:2094734/129‑1 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATAc                                  >  1:546688/1‑140 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATAc                                  >  2:1644616/1‑140 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATAc                                  >  2:1994004/1‑140 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATAc                                  >  2:2054610/1‑140 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATAc                                  >  1:550446/1‑140 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATAc                                  >  2:416311/1‑140 (MQ=255)

                                                                                                     agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATAc                                  >  1:1470300/1‑140 (MQ=255)

                                                                                                      gCCTTGTCCCCCGCATGATTGACATCGGGTGTTTCCGGTTTCAGATTACCGATGATTCACGACGC‑TATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACtt                                <  1:1165731/140‑1 (MQ=255)

                                                                                                      gCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACt                                 <  1:1329054/140‑1 (MQ=255)

                                                                                                      gCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACt                                 <  1:416311/140‑1 (MQ=255)

                                                                                                       ccTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACtt                                <  1:408749/140‑1 (MQ=255)

                                                                                                       ccTTGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACtt                                <  1:2370461/140‑1 (MQ=255)

                                                                                                         ttGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTa                              >  1:551879/1‑140 (MQ=255)

                                                                                                         ttGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCATAATAAGCGCGCCAGTCACGAATACTTTa                              >  1:1055366/1‑140 (MQ=255)

                                                                                                          tGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGccc                                             <  1:1949741/124‑1 (MQ=255)

                                                                                                          tGTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGccc                                             >  2:1949741/1‑124 (MQ=255)

                                                                                                           gTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATc                            >  1:2012830/1‑140 (MQ=255)

                                                                                                           gTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATc                            >  2:241854/1‑140 (MQ=255)

                                                                                                           gTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATc                            >  1:2438026/1‑140 (MQ=255)

                                                                                                           gTCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCATCACGAATACTTTATc                            >  2:23144/1‑140 (MQ=255)

                                                                                                            tCCCCCGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCg                           >  2:2225126/1‑140 (MQ=255)

                                                                                                                 cGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCgaagaa                      >  2:432416/1‑140 (MQ=255)

                                                                                                                 cGCAGGATTGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCGTAACAAGCGCGACCATCACGAATACTTTATCgaagaa                      >  1:1090081/1‑140 (MQ=255)

                                                                                                                         tGATATGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGa              >  2:2483658/1‑140 (MQ=255)

                                                                                                                           atatGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAACCCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAg            <  2:546688/140‑1 (MQ=255)

                                                                                                                           atatGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAg            <  1:2483658/140‑1 (MQ=255)

                                                                                                                           atatGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAg            >  1:1353480/1‑140 (MQ=255)

                                                                                                                            tatGGGGTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGc           <  1:241854/140‑1 (MQ=255)

                                                                                                                                gggTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGa       >  2:383624/1‑140 (MQ=255)

                                                                                                                                gggTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGa       >  1:1808381/1‑140 (MQ=255)

                                                                                                                                gggTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTAACGGATACTTTACCGAACAAGAGTTCGAAGCGGGa       >  2:784310/1‑140 (MQ=255)

                                                                                                                                 ggTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGAc      <  1:2145437/140‑1 (MQ=255)

                                                                                                                                 ggTGTTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGAc      >  1:509173/1‑140 (MQ=255)

                                                                                                                                  gtgtTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTTACGAATATTTTATCTAAGAAGTGTTCGAAGCGGGACt     >  1:781823/1‑140 (MQ=255)

                                                                                                                                    gtTTCCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTg   <  2:1365692/140‑1 (MQ=255)

                                                                                                                                    gtTTCCGATTTCAGACTACCGAGGAGTCACGACGCTTTTGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTg   <  1:1201062/140‑1 (MQ=255)

                                                                                                                                     tttcCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGc  >  2:2078001/1‑140 (MQ=255)

ACAATTTCCATCAACAAAAATCCAACAAATAATATCATTTATCCTGCTGTAAAAAAAACGCTATCCCGGCGCTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGC  >  NC_000913/2754727‑2754999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`