BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	366,110	C→T	A66T (GCA→ACA)	lacZ ←	beta‑galactosidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	366,110	0	C	T	100.0%	493.8 / NA	151	A66T (GCA→ACA)	lacZ	beta‑galactosidase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (84/67); total (84/67)

Only 100 of 153 total aligned reads displayed.

TTGACCGTAATGGGATAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAACGCC  >  NC_000913/365974‑366245

     cGTAATGGGATAGGTTACGTTGCTGCAGATGGGCGCAGCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAAcc                                                                                                                                 <  1:1158387/140‑1 (MQ=255)

     cGTAATGGGATAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAAcc                                                                                                                                 <  1:2107736/140‑1 (MQ=255)

        aaTGGGATAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAgg                                                                                                                              >  1:1582084/1‑140 (MQ=255)

         aTGGGATAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCTAGCTTTCCGGCACCACTTCTGCTGTCGGAAACCAGGc                                                                                                                             >  1:1136114/1‑140 (MQ=255)

               tAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCa                                                                                                                            <  1:376531/135‑1 (MQ=255)

               tAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCa                                                                                                                            >  2:376531/1‑135 (MQ=255)

                 ggTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGcgcc                                                                                                                     >  1:236869/1‑140 (MQ=255)

                  gTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTGCGGGACCGCTTCTGGTGTCGGGAACCAGGCAAAGcgcca                                                                                                                    >  2:681514/1‑140 (MQ=255)

                  gTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCTGCACCGCGTCTGGTGTCGGAAGCCAGGCAAAGcgcca                                                                                                                    >  1:701217/1‑140 (MQ=255)

                  gTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGcgcca                                                                                                                    >  2:2446587/1‑140 (MQ=255)

                  gTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGcgcca                                                                                                                    >  2:1634941/1‑140 (MQ=255)

                  gTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGcgcca                                                                                                                    >  2:191001/1‑140 (MQ=255)

                  gTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGcgcca                                                                                                                    >  1:1803374/1‑140 (MQ=255)

                  gTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGcgcca                                                                                                                    >  2:528132/1‑140 (MQ=255)

                  gTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAACCAGCTTTCCGGCAGCCATTCTGGTATCGGCAACCAGGCCAAGcgcca                                                                                                                    >  2:1184929/1‑140 (MQ=255)

                      cGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCATCTTTCCGGAACCTCTTCTGGTGTCGGAAACCAGGCAAAGcgccattcg                                                                                                                >  2:742021/1‑140 (MQ=255)

                      cGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGcgccattcg                                                                                                                >  1:1951106/1‑140 (MQ=255)

                       gTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGcgccattcgc                                                                                                               >  1:336562/1‑140 (MQ=255)

                            tgtAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCgctattcgccattc                                                                                                          >  2:1645197/1‑140 (MQ=255)

                            tgtAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCgccattcgccattc                                                                                                          >  1:335304/1‑140 (MQ=255)

                             gtAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCa                                                                                                         <  2:107068/140‑1 (MQ=255)

                             gtAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTAAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCa                                                                                                         <  1:1039898/140‑1 (MQ=255)

                               aGATGGGCGCATCGTAAGCGTGAATCTGCCATTTTTAGGAGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAgg                                                                                                       <  2:811512/140‑1 (MQ=255)

                                 aTGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCt                                                                                                     >  1:1366493/1‑140 (MQ=255)

                                    ggCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTgcg                                                                                                  <  1:2073318/140‑1 (MQ=255)

                                    ggCGCATCGTAACCGTGCATCTACCAGTTTGCGGGTACGTCGACAGTACCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTgcg                                                                                                  <  2:701217/140‑1 (MQ=255)

                                     gcgcATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCATGCAAAGCGCCATTCGCCATTCAGGCTgcgc                                                                                                 <  2:1557007/140‑1 (MQ=255)

                                     gcgcATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTgcgc                                                                                                 <  1:1831067/140‑1 (MQ=255)

                                     gcgcATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTgcgc                                                                                                 >  2:1707981/1‑140 (MQ=255)

                                     gcgcATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTgcgc                                                                                                 >  1:2040208/1‑140 (MQ=255)

                                     gcgcATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTgcgc                                                                                                 >  1:1850903/1‑140 (MQ=255)

                                      cgcATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCa                                                                                                >  1:478366/1‑140 (MQ=255)

                                      cgcATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTGCTGGTGTCGGAAACCAGGCAAAGCGGCATTCGCCATTCAGGCTGCGCa                                                                                                >  2:880503/1‑140 (MQ=255)

                                       gcATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCaa                                                                                               <  2:1803374/140‑1 (MQ=255)

                                        cATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAAc                                                                                              >  2:352329/1‑140 (MQ=255)

                                         aTCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCTAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACt                                                                                             <  1:135837/140‑1 (MQ=255)

                                                ccGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGa                                                                                      <  2:2040208/140‑1 (MQ=255)

                                                  gTGCATCTGCCAGTTCGAGGGGTCGCCGACAGTATCGCCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAg                                                                                    <  1:708708/140‑1 (MQ=255)

                                                   tGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGGGCCATTCGCCATTCAGGCTGCACAACTGTTGGGAAgg                                                                                   >  1:769752/1‑140 (MQ=255)

                                                   tGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTgcgc                                                                                                 >  2:1940928/1‑126 (MQ=255)

                                                      aTCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCTGGCAAAGCGCCATTCGGCATTCAGGATGCGGAACTGTTGGGAAGGGCg                                                                                >  2:1023318/1‑140 (MQ=255)

                                                        cTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGAt                                                                              <  1:2215305/140‑1 (MQ=255)

                                                        cTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGAt                                                                              <  2:166371/140‑1 (MQ=255)

                                                        cTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGAt                                                                              <  2:2228018/140‑1 (MQ=255)

                                                        cTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGAt                                                                              <  1:1426120/140‑1 (MQ=255)

                                                        cTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTAGACATTCAGGCTACGCAGTTGTTGGGAAGGGCGAt                                                                              >  2:1124574/1‑140 (MQ=255)

                                                          gCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCg                                                                            >  2:2448772/1‑140 (MQ=255)

                                                           ccAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCgg                                                                           >  1:2158080/1‑140 (MQ=255)

                                                             aGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTg                                                                         <  2:1395756/140‑1 (MQ=255)

                                                               tttGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCACCATTCGCAATTGAGGCTGCGCAACCGTTGCGAAGGGCGATCGGTGCg                                                                       >  2:745385/1‑140 (MQ=255)

                                                                ttGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCgg                                                                      >  1:445936/1‑140 (MQ=255)

                                                                  gAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGc                                                                    <  2:445936/140‑1 (MQ=255)

                                                                  gAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGc                                                                    <  2:2158080/140‑1 (MQ=255)

                                                                   aGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGcc                                                                   >  1:10537/1‑140 (MQ=255)

                                                                   aGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGcc                                                                   <  2:1659106/140‑1 (MQ=255)

                                                                       gacgacgacAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCtt                                                               <  1:191001/140‑1 (MQ=255)

                                                                         cgacgacAGTATCGGCCTCAGGTAGATCGGACTCCAGACAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCg                                                             <  1:1124574/140‑1 (MQ=255)

                                                                         cgacgacAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTACGCAACTTTTGGGAAGTGCGACAGGTGCGGCCCTCTTCg                                                             >  2:1195190/1‑140 (MQ=255)

                                                                             gacAGTATCGGCCTCGGGAAGACCGCACTTCAGCCAGGTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTAt                                                         <  1:970742/140‑1 (MQ=255)

                                                                                aGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGATGCGCAACGGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTAc                                                      >  2:952289/1‑140 (MQ=255)

                                                                                  tATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGc                                                    >  2:453434/1‑140 (MQ=255)

                                                                                    tCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCa                                                  >  1:2044258/1‑140 (MQ=255)

                                                                                    tCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGCAAGGGCGATCGATGCGGGCCTCTTCGCTATTACGCCa                                                  >  1:994033/1‑140 (MQ=255)

                                                                                      ggCCTCAGGAAGATCTCACTCCTGCCAGCTTTCCGGCCCCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGc                                                <  1:686401/140‑1 (MQ=255)

                                                                                         cTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTgg                                             <  2:478366/140‑1 (MQ=255)

                                                                                          tCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGTGATCGGTGCGGACCGCTTCGCGATTACGCCAGCTGGc                                            >  1:686671/1‑140 (MQ=255)

                                                                                          tCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCACTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGc                                            >  1:420547/1‑140 (MQ=255)

                                                                                           cAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCg                                           <  1:1503264/140‑1 (MQ=255)

                                                                                           cAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCg                                           <  1:2448772/140‑1 (MQ=255)

                                                                                            aGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTTGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGa                                          >  2:2064472/1‑140 (MQ=255)

                                                                                            aGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGc                                                >  1:2204222/1‑134 (MQ=255)

                                                                                            aGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGa                                          >  1:1974128/1‑140 (MQ=255)

                                                                                            aGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGa                                          >  1:570739/1‑140 (MQ=255)

                                                                                            aGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGa                                          <  2:1369968/140‑1 (MQ=255)

                                                                                            aGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCATCTTCGCTAGTACGCCAGCTGGCGa                                          >  1:1034218/1‑140 (MQ=255)

                                                                                            aGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCATCTTCGCTAATACGCCAGCTGGCGa                                          >  1:900566/1‑140 (MQ=255)

                                                                                                aGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCATCTGCGTTATTACTCCAGCTGGCGAAAgg                                      >  1:759424/1‑140 (MQ=255)

                                                                                                  aTCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGTGATCGGTGCGGGCCTCTTCGCTATTACGCCAg                                                 <  2:506681/127‑1 (MQ=255)

                                                                                                  aTCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAg                                                 >  1:506681/1‑127 (MQ=255)

                                                                                                  aTCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAgggg                                    >  2:354939/1‑140 (MQ=255)

                                                                                                   tCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAggggg                                   <  2:527084/140‑1 (MQ=255)

                                                                                                     gCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGAt                                 <  2:1982137/140‑1 (MQ=255)

                                                                                                      cACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGAtg                                <  2:1577858/140‑1 (MQ=255)

                                                                                                      cACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGAtg                                >  2:1964374/1‑140 (MQ=255)

                                                                                                            agccagcTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGtgctgc                          >  1:298177/1‑140 (MQ=255)

                                                                                                             gccagcTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCa                         <  2:1907558/140‑1 (MQ=255)

                                                                                                             gccagcTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCa                         >  2:1837275/1‑140 (MQ=255)

                                                                                                             gccagcTTTCCGACACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCa                         >  2:2145689/1‑140 (MQ=255)

                                                                                                              ccagcTTTCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGTAGGATGTGCTGCaa                        >  2:2316106/1‑140 (MQ=255)

                                                                                                                     tCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGAtt                 >  2:1923598/1‑140 (MQ=255)

                                                                                                                     tCCGGCACCGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGAtt                 <  1:1634941/140‑1 (MQ=255)

                                                                                                                     tCCGGCACCGCTTCTCGTGTCGCAAACCAAGCAAAGCTCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGAtt                 <  1:669805/140‑1 (MQ=255)

                                                                                                                         gCACCGCTTCTGGTGTCGGAAACCATGCAAAGCGCCAGTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGt             <  1:880503/140‑1 (MQ=255)

                                                                                                                            ccGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCaa                        >  2:1762980/1‑126 (MQ=255)

                                                                                                                            ccGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCaa                        <  1:1762980/126‑1 (MQ=255)

                                                                                                                             cGCTTCTGGTGTCGGAAACCAGTCAAAGCGCCATTTGCCTTTCAGGCTTCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTggg         <  2:686671/140‑1 (MQ=255)

                                                                                                                             cGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTggg         <  1:2151418/140‑1 (MQ=255)

                                                                                                                             cGCTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTggg         <  2:1828358/140‑1 (MQ=255)

                                                                                                                               cTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTGCGCCAGCTTGCGGAAGGGGGATGTGGTGCAGGGCGATTAAGTTGGGTa       >  2:669805/1‑140 (MQ=255)

                                                                                                                               cTTCTGGTGTCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGCGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTa       >  1:2439696/1‑140 (MQ=255)

TTGACCGTAATGGGATAGGTCACGTTGGTGTAGATGGGCGCATCGTAACCGTGCATCTGCCAGTTTGAGGGGACGACGACAGTATCGGCCTCAGGAAGATCGCACTCCAGCCAGCTTTCCGGCACCGCTTCTGGTGCCGGAAACCAGGCAAAGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAACGCC  >  NC_000913/365974‑366245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`