BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,894,436	A→G	T81A (ACC→GCC)	ygcP →	putative anti‑terminator regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,894,436	0	A	G	100.0%	751.4 / NA	212	T81A (ACC→GCC)	ygcP	putative anti‑terminator regulatory protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (105/107); total (105/107)

Only 100 of 218 total aligned reads displayed.

TGTTGTACGGCAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGACCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTCACAACATTGATAAGCAAGTTGCGCAAT  >  NC_000913/2894299‑2894571

tgttgtACGGCAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTAATCAGTTATTGAAACTGGTGGcc                                                                                                                                       >  1:1099728/1‑140 (MQ=255)

  ttgtACGGCAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGa                                                                                                                                     >  2:1599079/1‑140 (MQ=255)

    gtACGGCAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAgg                                                                                                                                   >  1:301245/1‑140 (MQ=255)

    gtACGGCAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAgg                                                                                                                                   >  1:1778167/1‑140 (MQ=255)

        ggCAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGa                                                                                                                               <  2:2031952/140‑1 (MQ=255)

          cAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACg                                                                                                                             >  2:547592/1‑140 (MQ=255)

            atatCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGc                                                                                                                           >  2:1734386/1‑140 (MQ=255)

             tatCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGAc                                                                                                                              >  1:1438460/1‑136 (MQ=255)

                   cACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCa                                                                                                                    <  1:558584/140‑1 (MQ=255)

                    aCCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAg                                                                                                                   >  1:2417112/1‑140 (MQ=255)

                    aCCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAg                                                                                                                   >  2:2481791/1‑140 (MQ=255)

                        tCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGc                                                                                                                           >  1:1599554/1‑128 (MQ=255)

                        tCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGc                                                                                                                           >  1:15906/1‑128 (MQ=255)

                        tCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCAt                                                                                                                         <  2:2264401/130‑1 (MQ=255)

                        tCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCAt                                                                                                                         >  1:2264401/1‑130 (MQ=255)

                        tCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTAcc                                                                                                               >  2:2012845/1‑140 (MQ=255)

                        tCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTAcc                                                                                                               >  1:400014/1‑140 (MQ=255)

                        tCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTAcc                                                                                                               >  2:217792/1‑140 (MQ=255)

                        tCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTAcc                                                                                                               >  2:2368162/1‑140 (MQ=255)

                         cAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTAcc                                                                                                               >  2:1833382/1‑139 (MQ=255)

                         cAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTCAAACTGGTGGCGGAAGCGGACGGCATTATCAGTACCa                                                                                                              >  1:1002415/1‑140 (MQ=255)

                          aGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCaa                                                                                                             <  1:2015791/140‑1 (MQ=255)

                          aGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCaa                                                                                                             >  2:2208702/1‑140 (MQ=255)

                           gTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCaaa                                                                                                            >  2:1469684/1‑140 (MQ=255)

                            tAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAg                                                                                                           <  2:1765036/140‑1 (MQ=255)

                             aaTATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGc                                                                                                          >  1:427471/1‑140 (MQ=255)

                               tatCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCt                                                                                                        <  1:1734386/140‑1 (MQ=255)

                               tatCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCt                                                                                                        >  2:288403/1‑140 (MQ=255)

                                atCGTTAAAAAGATTCAGAACGTCGTGAAATATGCTTGTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTc                                                                                                       <  1:1176806/140‑1 (MQ=255)

                                atCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCaa                                                                                                             <  2:2095552/134‑1 (MQ=255)

                                atCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCaa                                                                                                             >  1:2095552/1‑134 (MQ=255)

                                atCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTc                                                                                                       <  1:1371620/140‑1 (MQ=255)

                                atCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTc                                                                                                       <  1:616269/140‑1 (MQ=255)

                                  cGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCaa                                                                                                     >  2:1254362/1‑140 (MQ=255)

                                   gTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAAt                                                                                                    >  1:1810906/1‑140 (MQ=255)

                                    ttAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCaa                                                                                                             >  2:484141/1‑130 (MQ=255)

                                    ttAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATg                                                                                                   >  1:1971062/1‑140 (MQ=255)

                                    ttAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGACGAGGCGCACGGCACTATCAGTACCAAAGCCTCAATg                                                                                                   >  1:795959/1‑140 (MQ=255)

                                    ttAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTAGCCGAGGCGGACGGCAGTATCCGTACCAAAGCCTCAATg                                                                                                   >  2:1072457/1‑140 (MQ=255)

                                     tAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCTGAGGCGGCCGGAATAATCAGTACCAAAGCCTCAATGt                                                                                                  >  1:984345/1‑140 (MQ=255)

                                      aaaaaGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGtt                                                                                                 >  1:1910859/1‑140 (MQ=255)

                                         aaGATTAAGAACGCCGACAAATATGCTTTTACTCAAGTTAATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGaa                                                                                              <  2:1061259/140‑1 (MQ=255)

                                                aGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCa                                                                                       <  2:1971062/140‑1 (MQ=255)

                                                 gAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCaa                                                                                      <  1:286096/140‑1 (MQ=255)

                                                     gCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGc                                                                                  >  1:2185838/1‑140 (MQ=255)

                                                      ccGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCg                                                                                 >  1:513346/1‑140 (MQ=255)

                                                      ccGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCg                                                                                 >  2:112519/1‑140 (MQ=255)

                                                      ccGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCAGACGGCATAATCGGTAGCAAAGCCTGAATGTTGAAAGCGGCAAGAGCg                                                                                 >  2:920156/1‑140 (MQ=255)

                                                       cGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCgg                                                                                <  2:166343/140‑1 (MQ=255)

                                                       cGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCgg                                                                                <  2:1799714/140‑1 (MQ=255)

                                                       cGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCgg                                                                                <  2:396098/140‑1 (MQ=255)

                                                       cGGGAAATATGCTTTTATTCATGTTCATTCGCTGGAACGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCgg                                                                                <  1:752420/140‑1 (MQ=255)

                                                       cGGGAAATATGCTTTTATTCATCTTGATTTGTTGGCAGGAGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCgg                                                                                <  2:787827/140‑1 (MQ=255)

                                                        gggAAATATGCTTTTTTTCATGCTGCTTTTCTGGAAGCCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGa                                                                               <  1:693634/140‑1 (MQ=255)

                                                            aaTATGCTTTTATTCTTGTTGAATTGCTGGAAGGCGCATCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGt                                                                           <  1:810729/140‑1 (MQ=255)

                                                                 gCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGtttttt                                                                      >  1:1512906/1‑140 (MQ=255)

                                                                 gCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGtttttt                                                                      <  1:1317742/140‑1 (MQ=255)

                                                                 gCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGtttttt                                                                      <  2:1512906/140‑1 (MQ=255)

                                                                   ttttATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCGGTACCAAAGCCTAAATGTTGAAAGCGGCAAGGGCGGAAGGTTTTTTCt                                                                    >  2:1068695/1‑140 (MQ=255)

                                                                   ttttATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCt                                                                    >  2:88966/1‑140 (MQ=255)

                                                                    tttATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTg                                                                   <  2:567809/140‑1 (MQ=255)

                                                                    tttATTCATGTTGATTTACTGGAAGGCGCGTAAAAGAAAAAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTg                                                                   <  2:726031/140‑1 (MQ=255)

                                                                     ttattaATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGAACCAAAGCCTCAATGTAGAAAGCGGAAAGAGCGGAAGGTTTTTTCTGt                                                                  >  2:934961/1‑140 (MQ=255)

                                                                     ttATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGt                                                                  >  1:2061356/1‑140 (MQ=255)

                                                                        ttCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTAtt                                                               >  2:2311777/1‑140 (MQ=255)

                                                                           aTGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCAt                                                            <  2:416424/140‑1 (MQ=255)

                                                                            tGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATc                                                           >  1:335961/1‑140 (MQ=255)

                                                                            tGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTCAAAGCGGCAAGCGCAGAAGGTCTTTTCTGTATTCATc                                                           >  1:1141000/1‑140 (MQ=255)

                                                                             gTTGATTTGCTGGAATGCGCGTCAAATAAAGAAGTCGCTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCg                                                          <  1:934961/140‑1 (MQ=255)

                                                                              ttGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGc                                                         <  2:1408574/140‑1 (MQ=255)

                                                                              ttGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGc                                                         <  1:112132/140‑1 (MQ=255)

                                                                              ttGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGc                                                         <  2:586021/140‑1 (MQ=255)

                                                                              ttGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGc                                                         <  1:127845/140‑1 (MQ=255)

                                                                              ttGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGc                                                         <  1:2280872/140‑1 (MQ=255)

                                                                              ttGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGc                                                         <  1:2368162/140‑1 (MQ=255)

                                                                              ttGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGc                                                         <  1:88966/140‑1 (MQ=255)

                                                                              ttGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGc                                                         <  2:1941260/140‑1 (MQ=255)

                                                                              ttGATTTGCTGGAAGGCGCGTCAAAGAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGc                                                         <  1:1068695/140‑1 (MQ=255)

                                                                                 aTTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAATACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTg                                                      >  1:1645251/1‑140 (MQ=255)

                                                                                    tGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGttt                                                   <  2:130919/140‑1 (MQ=255)

                                                                                     gCTGGAAGGCGCGTCAATTAAAGAAGTCGTTGTTCTGTTGTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTa                                                  <  2:1002415/140‑1 (MQ=255)

                                                                                      cTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGc                                                         <  1:2143900/132‑1 (MQ=255)

                                                                                           aGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGGAGGCTTTTTCTGAATTCGTCGCCTGTTTAttgttg                                            >  2:658024/1‑140 (MQ=255)

                                                                                           aGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTAttgttg                                            >  2:1292473/1‑140 (MQ=255)

                                                                                              cgcgTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTAttgt                                              <  2:1708828/135‑1 (MQ=255)

                                                                                              cgcgTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTAttgt                                              >  1:1708828/1‑135 (MQ=255)

                                                                                                cgTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCa                                       >  1:1268427/1‑140 (MQ=255)

                                                                                                    aaaTAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAAttt                                   <  1:1224546/140‑1 (MQ=255)

                                                                                                      aTAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCg                                 <  1:2311777/140‑1 (MQ=255)

                                                                                                      aTAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCg                                 <  2:618612/140‑1 (MQ=255)

                                                                                                         aagaagTCGTTATTCTGTTTTTGAATCTGATGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGttt                              <  1:1072457/140‑1 (MQ=255)

                                                                                                           gaagTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTca                            <  2:576/140‑1 (MQ=255)

                                                                                                            aagTCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTAATCATCGCGTGTGTAGTGTTGAGTCAATTTCGTTTcac                           >  1:631641/1‑140 (MQ=255)

                                                                                                              gTCGTTATTCAGTTTTTGAAACTGGTTGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTCacaa                         >  1:488177/1‑140 (MQ=255)

                                                                                                               tCGTTATTCAGTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTGTTCTGTATACATGGCCTCTTTATTGGTGATAGAATTTCGTTTCacaac                        >  2:1206262/1‑140 (MQ=255)

                                                                                                                         gTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTCACAACATTGATAAGc              <  1:2452368/140‑1 (MQ=255)

                                                                                                                         gTTTTTGAAACTGGTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTCACAACATTGATAAGc              >  1:619124/1‑140 (MQ=255)

                                                                                                                            tttGAAACTGGTGGCCGCGGCGCACGGCATCCTTATTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTCACAACATTGATAAGCAAg           <  2:1171049/140‑1 (MQ=255)

                                                                                                                                    tggtggCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTCACAACATTGATAAGCAAGTTGCGCaa   >  2:1397485/1‑140 (MQ=255)

                                                                                                                                     ggTGGCCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTCACAACATTGATAAGCAAGTTGCGCAAt  <  2:2436791/140‑1 (MQ=255)

TGTTGTACGGCAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGACCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTCACAACATTGATAAGCAAGTTGCGCAAT  >  NC_000913/2894299‑2894571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`