BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,949,236	T→C	intergenic (‑226/‑6)	amiC ← / → argA	N‑acetylmuramoyl‑L‑alanine amidase C/N‑acetylglutamate synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,949,236	0	T	C	100.0%	640.5 / NA	180	intergenic (‑226/‑6)	amiC/argA	N‑acetylmuramoyl‑L‑alanine amidase C/N‑acetylglutamate synthase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (86/94); total (86/94)

Only 100 of 181 total aligned reads displayed.

CTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAG  >  NC_000913/2949101‑2949372

cTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGc                                                                                                                                      <  2:228152/140‑1 (MQ=255)

cTAATAAACGGTAAACACTCTTATTATATTCGCGGCATTCCTGATAAACAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGc                                                                                                                                      <  2:692824/140‑1 (MQ=255)

 taataaACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAACTACACTATTTTCGAATAATCAAGCAAAGAGGCGTGcc                                                                                                                                     >  1:1004851/1‑140 (MQ=255)

  aataaACGGTAAACATTCTTTTTATATTCACGGCATTATTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCg                                                                                                                                    >  2:1910597/1‑140 (MQ=255)

  aataaACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCg                                                                                                                                    <  1:1410512/140‑1 (MQ=255)

    taaACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTg                                                                                                                                  >  1:1257665/1‑140 (MQ=255)

    taaACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTg                                                                                                                                  >  1:2334628/1‑140 (MQ=255)

      aaCGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACAGTAATTTCAAATGATTATGCAAAGAGGCGTGCCGTGGt                                                                                                                                >  1:692824/1‑140 (MQ=255)

      aaCGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGt                                                                                                                                >  1:1937006/1‑140 (MQ=255)

      aaCGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGt                                                                                                                                >  1:2153673/1‑140 (MQ=255)

        cGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTaa                                                                                                                              <  2:2153673/140‑1 (MQ=255)

         ggTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTaaa                                                                                                                             >  1:546292/1‑140 (MQ=255)

           tAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAgg                                                                                                                           >  2:1230187/1‑140 (MQ=255)

            aaaCATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAAGTTCCAATGATCATGCAAAGAGACGTGCCGTAGTAAAGGa                                                                                                                          >  2:1215748/1‑140 (MQ=255)

               cATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACg                                                                                                                       <  1:583543/140‑1 (MQ=255)

               cATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACg                                                                                                                       <  2:364032/140‑1 (MQ=255)

               cATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACg                                                                                                                       <  2:546292/140‑1 (MQ=255)

               cATTCTTTTTATATTCACGGCACTACTGATAAAAAAGGCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACg                                                                                                                       <  1:1104739/140‑1 (MQ=255)

                 ttCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTa                                                                                                                     <  1:1706557/140‑1 (MQ=255)

                   cTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTTATTTCGAATAATGATGGAAAGAGGCGTGCCTTGGTAAAGGAACGTaaa                                                                                                                   >  2:653605/1‑140 (MQ=255)

                   cTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTaaa                                                                                                                   >  2:1513753/1‑140 (MQ=255)

                   cTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTa                                                                                                                     <  1:121114/138‑1 (MQ=255)

                      tttATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAAcc                                                                                                                <  1:1728828/140‑1 (MQ=255)

                         atatTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAg                                                                                                             >  2:528198/1‑140 (MQ=255)

                         atatTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAg                                                                                                             >  1:1221690/1‑140 (MQ=255)

                          tatTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGt                                                                                                            >  2:549308/1‑140 (MQ=255)

                          tatTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGt                                                                                                            >  2:1882068/1‑140 (MQ=255)

                              cACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGt                                                                                                        >  2:1472037/1‑140 (MQ=255)

                              cACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGt                                                                                                        >  2:1375846/1‑140 (MQ=255)

                                cGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAGTCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAg                                                                                                             >  2:1317872/1‑133 (MQ=255)

                                cGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAGTCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAg                                                                                                             <  1:1317872/133‑1 (MQ=255)

                                cGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCg                                                                                                      >  1:74476/1‑140 (MQ=255)

                                     ttACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCGAAGAGGCGGGCCGTGGGAAAGGAACGTAAAACCGAGTTGGTCGAGGGa                                                                                                 >  2:690775/1‑140 (MQ=255)

                                     ttACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGa                                                                                                 <  1:536108/140‑1 (MQ=255)

                                      tACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGAt                                                                                                >  2:1550640/1‑140 (MQ=255)

                                          gATAAAAAAGTCGCTATCGCATCAACTTTGCACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCg                                                                                            <  1:1171036/140‑1 (MQ=255)

                                           aTAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGc                                                                                           >  2:2451544/1‑140 (MQ=255)

                                           aTAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGc                                                                                           >  2:1845709/1‑140 (MQ=255)

                                           aTAAAAAAGTCGCTCTCCCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGCCGTGCCGTGGTATAGGAACGTAAAAGCGAGCTGGTCGAGGGATTCCGc                                                                                           >  2:878486/1‑140 (MQ=255)

                                             aaaaaaGTCGCTCTCGCATTAAAGTTACACTTGCAACCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCa                                                                                         <  1:1584363/140‑1 (MQ=255)

                                             aaaaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCa                                                                                         >  1:2090940/1‑140 (MQ=255)

                                             aaaaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCa                                                                                         <  2:2314660/140‑1 (MQ=255)

                                             aaaaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCa                                                                                         >  2:2410186/1‑140 (MQ=255)

                                             aaaaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCa                                                                                         <  2:1581281/140‑1 (MQ=255)

                                             aaaaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGGAAAACCGAGTTGGACGAGGGATTCCGCCa                                                                                         >  1:1017380/1‑140 (MQ=255)

                                               aaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCAtt                                                                                       <  1:490460/140‑1 (MQ=255)

                                               aaaaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCAtt                                                                                       <  1:528198/140‑1 (MQ=255)

                                                 aaGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCg                                                                                     <  1:2451544/140‑1 (MQ=255)

                                                  aGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACTCTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCgg                                                                                    <  1:1592692/140‑1 (MQ=255)

                                                  aGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCgg                                                                                    <  1:2192692/140‑1 (MQ=255)

                                                  aGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCgg                                                                                    <  1:336017/140‑1 (MQ=255)

                                                  aGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCgg                                                                                    <  2:1133002/140‑1 (MQ=255)

                                                  aGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCgg                                                                                    <  1:1230187/140‑1 (MQ=255)

                                                  aGTCGCTCTCGCATAAAATTTAAACATGCGCCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCgg                                                                                    <  1:653605/140‑1 (MQ=255)

                                                    tCGCTCTCGCATAAAATTTACAATTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGtt                                                                                  <  2:957144/140‑1 (MQ=255)

                                                     cGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCgg                                                                                    >  1:568014/1‑137 (MQ=255)

                                                       ctctCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTccc                                                                               <  1:1845709/140‑1 (MQ=255)

                                                       ctctCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCATGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTccc                                                                               <  2:571602/140‑1 (MQ=255)

                                                         ctcGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCta                                                                             <  1:2268293/140‑1 (MQ=255)

                                                            gCATAAAATTTACACCTGCACCCTGGGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTatat                                                                          <  1:995742/140‑1 (MQ=255)

                                                                      tACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTccc                                                                               >  1:2182114/1‑125 (MQ=255)

                                                                      tACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCAc                                                                >  1:2290426/1‑140 (MQ=255)

                                                                       acacTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCAcc                                                               <  1:386037/140‑1 (MQ=255)

                                                                           ttGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCgggg                                                           <  2:74476/140‑1 (MQ=255)

                                                                            tGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGa                                                          >  1:1502865/1‑140 (MQ=255)

                                                                            tGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGCCGAGGGATTCCGCCATCGGGTTCCTTTTTTCATTCCCCACCGGGGa                                                          >  2:2232951/1‑140 (MQ=255)

                                                                             gCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGaa                                                         >  1:317711/1‑140 (MQ=255)

                                                                              cACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGaaa                                                        >  2:441320/1‑140 (MQ=255)

                                                                                cccTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGaaaaa                                                      <  1:1473767/140‑1 (MQ=255)

                                                                                cccTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGaaaaa                                                      <  2:2168811/140‑1 (MQ=255)

                                                                                   tGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGt                                                   >  1:2423160/1‑140 (MQ=255)

                                                                                   tGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGt                                                   >  2:1786199/1‑140 (MQ=255)

                                                                                   tGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGt                                                   >  2:410796/1‑140 (MQ=255)

                                                                                     cGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGGTTCCGCCAATCGGTTCCCTATATCAATACCCACCGGGGACAAACGttt                                                 >  2:1156050/1‑140 (MQ=255)

                                                                                     cGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCAcc                                                               <  1:2008999/126‑1 (MQ=255)

                                                                                              aGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATg                                        <  1:1571424/140‑1 (MQ=255)

                                                                                                  tAAAAATACACTAATTTCGAATTATCATGCAGAGAAGCGGGCCGTGGTGAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTcg                                    <  2:789836/140‑1 (MQ=255)

                                                                                                     aaaTACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTg                                                <  2:1431649/125‑1 (MQ=255)

                                                                                                      aaTACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGTGGAAAAGCGTTTGTCATCATGCTcggcgg                                >  1:789836/1‑140 (MQ=255)

                                                                                                        tACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTg                              <  2:1250895/140‑1 (MQ=255)

                                                                                                        tACACTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTg                              <  2:1723543/140‑1 (MQ=255)

                                                                                                          cacTAATTTCGATTAATCATGCAAAGAGGCGTGCCGTGGTAAAGTAACGTAAAACCGAGTTGGTCGAGGGCTTCCGCCATTCGGTTCCCTATATCGATACCCACCGGGGAAAAACGTTTGCCATCATGCTCGGCCGTGaa                            >  2:2359773/1‑140 (MQ=255)

                                                                                                          cacTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGaa                            <  2:2228576/140‑1 (MQ=255)

                                                                                                          cacTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGaa                            >  1:2228576/1‑140 (MQ=255)

                                                                                                          cacTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTAAATCAATACACACGGGGTAAAAACGTATGTCCTCATGCTCGGCGGTGaa                            >  2:701040/1‑140 (MQ=255)

                                                                                                          cacTAATTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTAAATCAATACACACCGGGGAAAAACGTATGTCGTCATGCTCGGCGGTGaa                            >  2:1018267/1‑140 (MQ=255)

                                                                                                               aTTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCAt                       >  1:1400956/1‑140 (MQ=255)

                                                                                                               aTTTCGAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCAt                       >  2:414037/1‑140 (MQ=255)

                                                                                                                    gAATAATCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGc                  <  1:166930/140‑1 (MQ=255)

                                                                                                                         atCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTg                              <  2:1395945/123‑1 (MQ=255)

                                                                                                                         atCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTg                              >  1:1395945/1‑123 (MQ=255)

                                                                                                                         atCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATgag             >  2:472913/1‑140 (MQ=255)

                                                                                                                         atCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATgag             <  2:1533936/140‑1 (MQ=255)

                                                                                                                         atCATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATgag             >  2:1998227/1‑140 (MQ=255)

                                                                                                                           cATGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGaa           >  2:2188082/1‑140 (MQ=255)

                                                                                                                            aTGCAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAAt          <  2:2090940/140‑1 (MQ=255)

                                                                                                                               cAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCCCGGCGGTGAAGCCATTGAGCATGAGAATTtc       >  2:1067721/1‑140 (MQ=255)

                                                                                                                               cAAAGAGGCGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCACCATGCTCTGCGGTGGAGCCATGGAGCATGAGAATTtc       >  1:680332/1‑140 (MQ=255)

                                                                                                                                 aaGAGGCGTGCCGTGGTAAAGGAACTTAACACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtctc     <  1:878486/140‑1 (MQ=255)

                                                                                                                                    agGCGTGCCGTGGTAAAGGAACCTATAACAGAGTTGGTTGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAg  <  1:715482/140‑1 (MQ=255)

CTAATAAACGGTAAACATTCTTTTTATATTCACGGCATTACTGATAAAAAAGTCGCTCTCGCATAAAATTTACACTTGCACCCTGCGAAAAAACAGAATAAAAATACACTAATTTCGAATAATCATGCAAAGAGGTGTGCCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAG  >  NC_000913/2949101‑2949372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`