| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,093,919 | C→T | intergenic (+3/+181) | yqgF → / ← yggR | ribonuclease H‑like domain containing nuclease/Type II/IV secretion system family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,093,919 | 0 | C | T | 99.1% | 361.6 / NA | 108 | intergenic (+3/+181) | yqgF/yggR | ribonuclease H‑like domain containing nuclease/Type II/IV secretion system family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (41/66); minor base A (0/1); total (41/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 109 total aligned reads displayed.
GCGTCTTAGCACTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGCGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGA > NC_000913/3093787‑3094048 | gCGTCTTAGCACTGTTGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTaa < 1:954066/140‑1 (MQ=255)gCGTCTTAGCACTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTaa < 1:346438/140‑1 (MQ=255) cGTCTTAGCACTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCACGGATATTAAGGTGATTTaaa > 1:363988/1‑140 (MQ=255) gCACTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTgg < 2:175459/140‑1 (MQ=255) cACTGTGGAAGCCCGGTCCGGTTTGTTTGTACAGGGCCGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGc < 1:1089264/140‑1 (MQ=255) aCTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCg > 2:2228924/1‑140 (MQ=255) aCTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCg < 2:2113945/140‑1 (MQ=255) aCTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCg < 1:34031/140‑1 (MQ=255) aCTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCg < 1:1315783/140‑1 (MQ=255) aCTGTGGAAGCCCGTCCCGGTCCGTGTGATCAGGGCGCCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCg < 1:1214367/140‑1 (MQ=255) aCTGTGGAAGCCCGTACCGGTCGGTATGACCAGGGCGCCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCg < 1:1029674/140‑1 (MQ=255) cTGTGGAAGCCCGTTCCTGTCTATTTGAACATGGCTGCTGTCGGGCGCACAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCgg < 2:986295/140‑1 (MQ=255) cTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCgg < 1:2228924/140‑1 (MQ=255) cTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCgg < 1:233004/140‑1 (MQ=255) cTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCgg > 2:1297775/1‑140 (MQ=255) cTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCgg < 2:596416/140‑1 (MQ=255) cTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTGCGAGCAGCGATGTTTAGGTGATTTAAACGCCTGGCgg > 1:949673/1‑140 (MQ=255) tgtgGACGCTCGTTCCGGTCTGTTTGACCAGGGCGGCTATCGGGCGCTCGACAAAGGTAAAGTTGACTCTGCCTCCGCGGTTATTATTCTCGTTAGCTATTTCGAGCAGGGATATTAAGGTGATTTAACCGCCTGGCgca < 2:1533598/140‑3 (MQ=255) tgtgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGa < 1:103316/140‑1 (MQ=255) tgtgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGa < 1:1407397/140‑1 (MQ=255) tgtgGAAGCCCGTTCCGGTCTGTTTGAACAGCGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGa < 2:973846/140‑1 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAAGAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGCGCAGGGACATTGAGTTGATTTTAACGCCTGGCGGAgg > 1:1075420/1‑139 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTTGAGAAGGGATATTAAGGTGATATAAACGCCTGGCGGAgt > 2:1029674/1‑140 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCg < 2:475201/136‑1 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCg > 1:475201/1‑136 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt > 1:1695550/1‑140 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt > 2:563865/1‑140 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt > 2:489411/1‑140 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt < 1:1121980/140‑1 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt > 1:1282840/1‑140 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt > 2:1429642/1‑140 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt > 2:1228807/1‑140 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt > 2:1121980/1‑140 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt < 1:489411/140‑1 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt > 1:1483120/1‑140 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt < 1:1666377/140‑1 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt > 1:1754249/1‑140 (MQ=255) tgGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgt < 1:207499/140‑1 (MQ=255) tgGAAGCCCGTTCCGGGCTGTTGGAACAGGGAGTCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCAGAgt < 2:1168052/140‑1 (MQ=255) ggAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgtg < 2:268800/140‑1 (MQ=255) ggAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgtg < 1:2101610/140‑1 (MQ=255) ggAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgtg < 2:1282840/140‑1 (MQ=255) ggAAGCCCGTTCCGGTATGTTTGAACAGGGCGGTTATCGTGCGCTCAAGAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgtg < 2:1075420/140‑1 (MQ=255) aaGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTa < 1:563865/140‑1 (MQ=255) gCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTaaa < 1:2307715/140‑1 (MQ=255) ttCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGa > 1:2008705/1‑128 (MQ=255) ttCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGa < 2:2008705/128‑1 (MQ=255) ttCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAataata > 2:346406/1‑140 (MQ=255) ccGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATatc < 2:1695550/140‑1 (MQ=255) ggTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATatcat < 2:2121125/140‑1 (MQ=255) gTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgtg < 2:576386/126‑1 (MQ=255) gTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAgtg > 1:576386/1‑126 (MQ=255) tCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATcg > 2:341611/1‑140 (MQ=255) gTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGt < 2:1341415/140‑1 (MQ=255) tttGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTc < 2:606420/140‑1 (MQ=255) taaCCGGGCGGGTTACGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTa < 2:1368172/139‑1 (MQ=255) gAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTa < 1:1297775/140‑1 (MQ=255) gggCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGcc > 1:2391008/1‑140 (MQ=255) ggcggcTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATcgc < 1:1362155/128‑1 (MQ=255) ggcggcTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATcgc > 2:1362155/1‑128 (MQ=255) cTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATgc < 1:613840/140‑1 (MQ=255) cTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATgc > 2:226630/1‑140 (MQ=255) tATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATgcg < 2:295605/140‑1 (MQ=255) gggCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGt < 2:1758875/140‑1 (MQ=255) ggCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTg > 1:1485304/1‑140 (MQ=255) gcgcTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGa < 2:2391008/140‑1 (MQ=255) gcgcTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGa < 1:1228807/140‑1 (MQ=255) caacaaAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACAcc < 2:442774/140‑1 (MQ=255) caacaaAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACAcc < 1:346406/140‑1 (MQ=255) caacaaAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACAcc < 2:1754249/140‑1 (MQ=255) aacaaAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATCTCATCGCGTCTGATCGCCGGACGCGGCGTGAACACCt > 1:1163195/1‑140 (MQ=255) aaaGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTAt < 1:234219/140‑1 (MQ=255) aaGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTTTCGTAAGCTATTGCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATc < 2:1117434/140‑1 (MQ=255) aaGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATc < 1:341611/140‑1 (MQ=255) aaGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATc < 2:630070/140‑1 (MQ=255) aaGGCAAACTTGACTCGTCCTCTGCGGTTATTATTTTCGGAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATc < 2:1163195/140‑1 (MQ=255) cAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGc > 1:179688/1‑140 (MQ=255) aaGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCTGCGTGAACACCTTATCCAGcac > 1:1096498/1‑140 (MQ=255) aaGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGcac > 1:1576724/1‑140 (MQ=255) aaGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGcac > 1:1591806/1‑140 (MQ=255) aCTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCt > 2:2312054/1‑140 (MQ=255) tgcctctgcGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCa < 2:327579/140‑1 (MQ=255) gcctctgcGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAg < 2:2346759/140‑1 (MQ=255) cctctgcGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGc < 1:263455/140‑1 (MQ=255) cctctgcGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGc > 1:1490999/1‑140 (MQ=255) cctctgcGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGc < 2:1490999/140‑1 (MQ=255) tgcGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCt > 1:2065100/1‑140 (MQ=255) gcGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCta < 2:2417394/140‑1 (MQ=255) ggTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAGCGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCtata < 2:1485304/140‑1 (MQ=255) gTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAg < 2:1483120/140‑1 (MQ=255) tattatTCTCGAAAGCTGTTTCCAGCAGGGATATTAAGGAGATTTAAAAGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGt < 2:760063/140‑1 (MQ=255) cGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATTCAGCACAGATCAGGGAGCGGCAATAGGTCTGATAAGa > 1:751498/1‑140 (MQ=39) cGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGa > 2:1982866/1‑140 (MQ=255) cGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGa > 1:2296096/1‑140 (MQ=255) cGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGa < 2:383726/140‑1 (MQ=255) cGAAAGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTAAACACCTTTTCCCGCACACATCTGGAAGCGGCTATAGGTCTGATAAGa > 2:1055994/1‑140 (MQ=255) aGCTATTTCGAGCAGGGATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGAcgcg < 2:1576724/140‑1 (MQ=255) tCGAGCAGGGATATTAACGTGAATTAAACGCCTGGCGGACTGTAAATACTATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGt < 2:751498/140‑1 (MQ=37) ggATATTAAGGTGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAg > 2:2445047/1‑140 (MQ=255) gATATTAAGGTGATTCAAACGCCTGTCGGTGTGTAAACAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGa < 1:779661/140‑1 (MQ=37) | GCGTCTTAGCACTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAAGGCGATTTAAACGCCTGGCGGAGTGTAAATAATATCATCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGA > NC_000913/3093787‑3094048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |