BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,101,067	T→C	N186S (AAC→AGC)	yggN ←	putative EcfF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,101,067	0	T	C	100.0%	473.3 / NA	146	N186S (AAC→AGC)	yggN	putative EcfF
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (69/77); total (69/77)

Only 100 of 156 total aligned reads displayed.

TGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGTTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGAAACGTCAGGCC  >  NC_000913/3100930‑3101203

tGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCTGGCGTCGCAGCACGTTCTGTAATGGGCTa                                                                                                                                        >  1:1216736/1‑140 (MQ=255)

tGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTa                                                                                                                                        >  1:429279/1‑140 (MQ=255)

tGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCGTCCCAGCACTTTCTGTAATGGGCTa                                                                                                                                        >  1:971690/1‑140 (MQ=255)

tGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAA‑CCCCCCCCGGCATCCCAGCACGTTCTGTAATGGGCTa                                                                                                                                        >  1:1041182/1‑140 (MQ=255)

      tATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTAccgccg                                                                                                                                  <  2:1803166/140‑1 (MQ=255)

                  tCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCAcc                                                                                                                      >  1:1907766/1‑140 (MQ=255)

                  tCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCACCACATTCTGTAGTGGGCTACCACCGCTTTTCAGCAcc                                                                                                                      >  1:1052224/1‑140 (MQ=255)

                    acaACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGc                                                                                                                    >  1:1379019/1‑140 (MQ=255)

                    acaACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGc                                                                                                                    >  2:2407109/1‑140 (MQ=255)

                    acaACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGAGCTACCGCCGCTTTTCAGCACCGc                                                                                                                    >  1:1561963/1‑140 (MQ=255)

                          cgGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTcgc                                                                                                              >  1:407996/1‑140 (MQ=255)

                           ggatACAAACAATTTTGCCAATCTCCTGGAAACCTTTTTCCTCCTTTTTCCACTGGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTcgcg                                                                                                             <  2:480216/137‑1 (MQ=255)

                           ggCTACAAACATCTTTGCCAACGTGCTGGAAGTCTTTTTTCTGCTTTTCCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTcgcg                                                                                                             <  2:971690/140‑1 (MQ=255)

                           ggCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTcgcg                                                                                                             <  2:2264805/140‑1 (MQ=255)

                           ggCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTcgcg                                                                                                             <  1:280239/140‑1 (MQ=255)

                           ggCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTcgcg                                                                                                             >  2:372438/1‑140 (MQ=255)

                             cTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGcc                                                                                                           <  2:2446164/140‑1 (MQ=255)

                                cAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGcc                                                                                                           >  2:1314332/1‑137 (MQ=255)

                                cAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGcc                                                                                                           <  1:1314332/137‑1 (MQ=255)

                                cAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCAt                                                                                                        <  2:46024/140‑1 (MQ=255)

                                cAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCAt                                                                                                        <  2:628657/140‑1 (MQ=255)

                                cAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCAt                                                                                                        <  1:372438/140‑1 (MQ=255)

                                cAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCAt                                                                                                        <  1:135744/140‑1 (MQ=255)

                                cAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCAt                                                                                                        <  1:142829/140‑1 (MQ=255)

                                cAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCAt                                                                                                        <  2:3421/140‑1 (MQ=255)

                                   aCATCTTTGCCAATCGGCGGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTc                                                                                                     <  2:150414/140‑1 (MQ=255)

                                     ctCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCAt                                                                                                   <  2:380431/139‑1 (MQ=255)

                                     aTCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCAt                                                                                                   <  1:1912100/140‑1 (MQ=255)

                                     aTCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCAt                                                                                                   <  2:429279/140‑1 (MQ=255)

                                     aTCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCAt                                                                                                   <  2:1806032/140‑1 (MQ=255)

                                       cTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTa                                                                                                 >  1:1792710/1‑140 (MQ=255)

                                        tttGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTaa                                                                                                <  2:407996/140‑1 (MQ=255)

                                          tGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATg                                                                                              <  1:1727651/140‑1 (MQ=255)

                                          tGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATg                                                                                              <  1:457177/140‑1 (MQ=255)

                                          tGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATg                                                                                              <  2:293186/140‑1 (MQ=255)

                                          tGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATg                                                                                              >  1:266896/1‑140 (MQ=255)

                                           gCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAGCCCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATg                                                                                              >  2:1894153/1‑140 (MQ=255)

                                            ccAAACTGCTGGAAATCTTTTTACTCCTTCTTCCACTTGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCt                                                                                            <  1:794605/140‑1 (MQ=255)

                                             cAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGTTg                                                                                           <  2:1655233/140‑1 (MQ=255)

                                             cAAACTGCTGGAAATCTTTTTCCTGATTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTg                                                                                           <  1:917139/140‑1 (MQ=255)

                                               aaCTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTc                                                                                         <  1:1402569/140‑1 (MQ=255)

                                               aaCTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTc                                                                                         <  1:2407109/140‑1 (MQ=255)

                                                    ctgGAAATCTTTTTCCTGCTTTATCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTa                                                                                    <  1:1000221/140‑1 (MQ=255)

                                                    ctgGAAATCTTTTTCATGCTTTTTCTACTTGGTTTGGCTTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTa                                                                                    <  1:735725/140‑1 (MQ=255)

                                                         aaTCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTTCTGTAAAAtt                                                                               >  1:603959/1‑140 (MQ=255)

                                                         aaTCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAAtt                                                                               >  1:2335512/1‑140 (MQ=255)

                                                              ttttCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCATCACCGCTTACGCGCCCGTTTCATTACTGCTTTCCTGTAAAATTCCAcc                                                                          >  2:1009977/1‑140 (MQ=255)

                                                                ttCCTGATTTTTCCCCCGGGTTTGGATTGAGGATTCCAC‑TCCCCCCAGTCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCa                                                                        <  2:858057/140‑1 (MQ=255)

                                                                  ccTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCAtt                                                                      <  1:1301534/140‑1 (MQ=255)

                                                                   cctcTTTTTCCCCCCGGTTTGGATTTGAGATTGCCG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTg                                                                     <  1:1814098/137‑1 (MQ=255)

                                                                      cTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCt                                                                  >  2:1493330/1‑140 (MQ=255)

                                                                        ttttCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGa                                                                <  2:1994619/140‑1 (MQ=255)

                                                                        ttttCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGa                                                                <  1:300022/140‑1 (MQ=255)

                                                                           tCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCTTTAATGCGGTCCTGTAAAATTTCACCCATTGCCTGATTc                                                             >  2:1004670/1‑140 (MQ=255)

                                                                            ccACTCGGTTTGGATGGAGGATAGCTG‑CCCACCCAGGCTTCCCAGCACATTCTTTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCa                                                            <  1:1063389/140‑1 (MQ=255)

                                                                              aCTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGCCTCCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACt                                                          <  2:2333829/140‑1 (MQ=255)

                                                                                tCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCAATTCATTAAAGCTATCCGGTAAAATTGCACCGATTGCCTGATTCACTaa                                                        >  2:792387/1‑140 (MQ=255)

                                                                                         aTTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACt                                                          >  1:74166/1‑129 (MQ=255)

                                                                                           tGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAAGGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCTCACAATGCCTGATTCCCTAATTGCTGGCCtt                                             <  2:1907766/140‑1 (MQ=255)

                                                                                            gAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTc                                            >  2:1360714/1‑140 (MQ=255)

                                                                                                aTTGCAG‑CCCCCCCAGGGTTCCTAGCACATTTTGTAATGTGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGgcg                                        <  2:857670/140‑1 (MQ=255)

                                                                                                aTTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGgcg                                        <  2:1379019/140‑1 (MQ=255)

                                                                                                aTTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGgcg                                        <  2:2335512/140‑1 (MQ=255)

                                                                                                aTTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGgcg                                        <  1:1361541/140‑1 (MQ=255)

                                                                                                  tGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCGACCCATTTTCTGATTCACTAATCGCTGGCCTTCGGcgcg                                      >  2:1185619/1‑140 (MQ=255)

                                                                                                  tGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCAACCATTGCCTGATTCTCTAATTGCTGGCCTTCGGcgcg                                      >  1:1200734/1‑140 (MQ=255)

                                                                                                  tGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTATAAAATTCTACCGATTGCCTGATTCACTAAATGCTGGCCTTCGGcgcg                                      >  2:1082220/1‑140 (MQ=255)

                                                                                                     aG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAAc                                   <  1:2308157/140‑1 (MQ=255)

                                                                                                      g‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAAcc                                  <  1:2098911/140‑1 (MQ=255)

                                                                                                        cccccccAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCt                                 >  2:1403631/1‑140 (MQ=255)

                                                                                                          cccccAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGgcg                                        <  1:352678/131‑1 (MQ=255)

                                                                                                            cccAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGATCCTGATc                             <  2:1352309/140‑1 (MQ=255)

                                                                                                            cccAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCAACCCATTGCCTGGTTCCCTAATTGCTGGCCTTCGGCGCGAACCTGATc                             >  2:819050/1‑140 (MQ=255)

                                                                                                              cAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCaa                           <  1:1493330/140‑1 (MQ=255)

                                                                                                              cAGGCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCaa                           <  2:1300912/140‑1 (MQ=255)

                                                                                                              cAGGCTTCCCAGCACACTCTGTAATGGGCTCCCGCTGCTCTTCAGCACAGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCaa                           <  2:1216736/140‑1 (MQ=255)

                                                                                                                ggCTTCCCAGCACATTCTGTAATGGGCTACCGCCGCTGTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATg                         <  1:1009977/140‑1 (MQ=255)

                                                                                                                    tCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCtt                     >  1:622952/1‑140 (MQ=255)

                                                                                                                    tCCCAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCtt                     >  2:2221173/1‑140 (MQ=255)

                                                                                                                     cccAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCttt                    <  2:1239314/140‑1 (MQ=255)

                                                                                                                     cccAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCttt                    >  2:1859406/1‑140 (MQ=255)

                                                                                                                     cccAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCAGATCAATGGCttt                    >  2:1910425/1‑140 (MQ=255)

                                                                                                                      ccAGCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTta                   >  2:1724263/1‑140 (MQ=255)

                                                                                                                       cAGCCCATTCTGTAATGTGCTACCGCCGCTTGTCAGCACAGCTTTCGCCCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTtat                  <  2:712036/140‑1 (MQ=255)

                                                                                                                         gCACATTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAg                >  1:2203655/1‑140 (MQ=255)

                                                                                                                            caTTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGa             >  1:314133/1‑140 (MQ=255)

                                                                                                                            caTTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGa             <  2:2481313/140‑1 (MQ=255)

                                                                                                                             aTTCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGaa            >  1:1885596/1‑140 (MQ=255)

                                                                                                                               tCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCTAACCTGATCAATGGCTTTATAGTGAAAc          >  2:2028591/1‑140 (MQ=255)

                                                                                                                               tCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCaa                           <  2:2013952/123‑1 (MQ=255)

                                                                                                                               tCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCaa                           >  1:2013952/1‑123 (MQ=255)

                                                                                                                               tCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGa             >  1:161968/1‑137 (MQ=255)

                                                                                                                               tCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGa             <  2:161968/137‑1 (MQ=255)

                                                                                                                               tCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGAAAc          >  1:1660453/1‑140 (MQ=255)

                                                                                                                               tCTGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGAAAc          >  1:225278/1‑140 (MQ=255)

                                                                                                                                 tGTAATGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGAAACGt        <  1:1724263/140‑1 (MQ=255)

                                                                                                                                   tAATGGGCTACCGCCGCATTTCAGCACCGCTATCGCGCCCATTTCATTCATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGAAACGTCa      <  2:718638/140‑1 (MQ=255)

                                                                                                                                    aaTGGGCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGCCGCGAACATGATCAATGGCTTGATAGTGAAACGTCAg     >  1:1029493/1‑140 (MQ=255)

                                                                                                                                      tGGGCTACCGCCGCTTTACAGCTCCGCTTTCGCGCCCATCTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGAAACGTCAGGc   <  2:1052224/140‑1 (MQ=255)

                                                                                                                                       gggCTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGAAACGTCAGGcc  >  1:1322434/1‑140 (MQ=255)

TGCGGCTATCTTCCAGAGTCACAACGCGGCTACAAACATCTTTGCCAAACTGCTGGAAATCTTTTTCCTGCTTTTTCCACTCGGTTTGGATTGAGGATTGCAG‑CCCCCCCAGGCTTCCCAGCACATTCTGTAATGGGTTACCGCCGCTTTTCAGCACCGCTTTCGCGCCCATTTCATTAATGCTGTCCTGTAAAATTCCACCCATTGCCTGATTCACTAATTGCTGGCCTTCGGCGCGAACCTGATCAATGGCTTTATAGTGAAACGTCAGGCC  >  NC_000913/3100930‑3101203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`