BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,153,839	T→C	L93L (TTA→CTA)	yghB →	DedA family protein YghB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,153,839	0	T	C	100.0%	369.8 / NA	103	L93L (TTA→CTA)	yghB	DedA family protein YghB
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (59/44); total (59/44)

Only 100 of 103 total aligned reads displayed.

TGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGC  >  NC_000913/3153705‑3153974

tGCCAGGCGACAGCTTGTTGATTCTCGCAGGCGCATTAATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAggg                                                                                                                                    <  1:1097621/140‑1 (MQ=255)

  ccAGGCGGCAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGaa                                                                                                                                  >  2:1439211/1‑140 (MQ=255)

  ccAGGCGACAGCTTGATGATACAGGTAGGAGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGaa                                                                                                                                  <  1:1140758/140‑1 (MQ=255)

     ggCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATAc                                                                                                                               >  1:424053/1‑140 (MQ=255)

     ggCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCCAATTTATATTTAGGGGTGCTGGCTGGGGAATAc                                                                                                                               >  2:1140758/1‑140 (MQ=255)

       caaCAGCTTGTTGATACTGGCAGGCGCATTGATGGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGTGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCa                                                                                                                             <  1:624972/138‑1 (MQ=255)

       cGACAGCTTGTTGATACTGGCACGCTCATGGATTGCCTAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCa                                                                                                                             <  1:926012/140‑1 (MQ=255)

                 ttgATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGaa                                                                                                                   <  1:2054692/140‑1 (MQ=255)

                      aCTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAAGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAggct                                                                                                              >  1:879958/1‑140 (MQ=255)

                       cTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAggctg                                                                                                             >  2:1328499/1‑140 (MQ=255)

                       cTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAggctg                                                                                                             >  2:1888254/1‑140 (MQ=255)

                         ggCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAggctggc                                                                                                           <  1:1439211/140‑1 (MQ=255)

                          gCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAggctggct                                                                                                          >  2:623469/1‑140 (MQ=255)

                          gCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAggctggct                                                                                                          >  2:2220952/1‑140 (MQ=255)

                          gCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAgg                                                                                                                <  2:1933791/134‑1 (MQ=255)

                          gCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAgg                                                                                                                >  1:1933791/1‑134 (MQ=255)

                           cAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGgctggctg                                                                                                         >  1:2373175/1‑140 (MQ=255)

                            aGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGctggctgg                                                                                                        >  1:531829/1‑140 (MQ=255)

                              gcgcATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGca                                                                                                      >  2:30069/1‑140 (MQ=255)

                               cgcATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGcac                                                                                                     >  2:102857/1‑140 (MQ=255)

                               cgcATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGcac                                                                                                     >  1:1228730/1‑140 (MQ=255)

                                   ttgattgCCCAGGGGGTTATGGATTTTCTGCCTACGATTGGGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCt                                                                                                 <  1:1597654/140‑1 (MQ=255)

                                    tgattgCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCtt                                                                                                >  1:1618859/1‑140 (MQ=255)

                                      attgCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGgctggctg                                                                                                         <  1:1815293/129‑1 (MQ=255)

                                      attgCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGgctggctg                                                                                                         >  2:1815293/1‑129 (MQ=255)

                                        tgCCCGGGGGGTTATGGATTTTCTGCCTACGAGTGCAATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTg                                                                                            <  2:1716198/140‑1 (MQ=255)

                                        tgCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTg                                                                                            <  2:1612669/140‑1 (MQ=255)

                                         gCCCGGGGTGTTATGGTTTTTCTGCCTACGATTTCAATTCTGACCGCCTCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGc                                                                                           <  2:1078338/140‑1 (MQ=255)

                                         gCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGc                                                                                           <  2:19682/140‑1 (MQ=255)

                                         gCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGc                                                                                           <  1:362423/140‑1 (MQ=255)

                                         gCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGc                                                                                           <  2:424053/140‑1 (MQ=255)

                                         gCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGc                                                                                           <  1:1328499/140‑1 (MQ=255)

                                         gCCCAGGGGGTTATGGATTTTCAGCCTACGATTGCTATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGc                                                                                           <  2:1015650/140‑1 (MQ=255)

                                           ccAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTa                                                                                         <  2:1612243/140‑1 (MQ=255)

                                           ccAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTa                                                                                         <  1:2384636/140‑1 (MQ=255)

                                             aGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTaaa                                                                                       >  2:2240413/1‑140 (MQ=255)

                                             aGGGGGTTATGGATTCTCTGCCCACCATTTCGATTCTCACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTaaa                                                                                       <  1:659797/140‑1 (MQ=255)

                                              gggggTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAat                                                                                      >  1:1498823/1‑140 (MQ=255)

                                              gggggTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAat                                                                                      >  2:347711/1‑140 (MQ=255)

                                                gggTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAatat                                                                                    >  2:1331582/1‑140 (MQ=255)

                                                    tATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCAcc                                                                                >  2:1468835/1‑140 (MQ=255)

                                                    tATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCAcc                                                                                >  2:1630740/1‑140 (MQ=255)

                                                         aTTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAgcgc                                                                           >  2:1485791/1‑140 (MQ=255)

                                                         aTTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAgcgc                                                                           >  1:1952666/1‑140 (MQ=255)

                                                         aTTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAgcgc                                                                           >  1:1884541/1‑140 (MQ=255)

                                                          ttttttGCCTACGATTGGGATTCTGTCCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAgcgcg                                                                          <  2:1618859/140‑1 (MQ=255)

                                                          ttttCTGCCTACGATTGGGATTTTGACCGCCGCAGAAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAgcgcg                                                                          <  2:879958/140‑1 (MQ=255)

                                                            ttCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGcc                                                                        >  2:2321824/1‑140 (MQ=255)

                                                              cTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCAc                                                                      <  1:102857/140‑1 (MQ=255)

                                                                gCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGTTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCt                                                                    <  2:1884541/140‑1 (MQ=255)

                                                                gCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCt                                                                    <  2:2386265/140‑1 (MQ=255)

                                                                gCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCt                                                                    <  1:481044/140‑1 (MQ=255)

                                                                  cTACGATTGCGATTCTGACCGCCGCAGCAAGGCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGc                                                                  >  1:547051/1‑140 (MQ=255)

                                                                          gCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGa                                                          <  1:1468835/140‑1 (MQ=255)

                                                                           cGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGAc                                                         >  1:485365/1‑140 (MQ=255)

                                                                           cGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGAc                                                         >  1:1866100/1‑140 (MQ=255)

                                                                               tCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGcc                                                     <  1:2240413/140‑1 (MQ=255)

                                                                               tCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGcc                                                     <  1:2220952/140‑1 (MQ=255)

                                                                                cTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCa                                                    >  1:576174/1‑140 (MQ=255)

                                                                                cTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCa                                                    <  2:576174/140‑1 (MQ=255)

                                                                                cTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCa                                                    >  1:2030543/1‑140 (MQ=255)

                                                                                   aCCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACgg                                                 <  2:1498823/140‑1 (MQ=255)

                                                                                   aCCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACgg                                                 >  2:1260649/1‑140 (MQ=255)

                                                                                   aCCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACgg                                                 >  2:1980462/1‑140 (MQ=255)

                                                                                        cgcAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTctgc                                            >  1:146597/1‑140 (MQ=255)

                                                                                        cgcAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTctgc                                            >  2:1333651/1‑140 (MQ=255)

                                                                                        cgcAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTctgc                                            >  2:1933480/1‑140 (MQ=255)

                                                                                          cagcaAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTctgctg                                          >  1:287277/1‑140 (MQ=255)

                                                                                             caAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGgcg                                       >  2:1997139/1‑140 (MQ=255)

                                                                                                gTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCgctg                                    <  2:1952666/140‑1 (MQ=255)

                                                                                                    gggCTGCTGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTgctgg                                <  1:1331582/140‑1 (MQ=255)

                                                                                                      gctgctGGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTgctggct                              <  2:2373175/140‑1 (MQ=255)

                                                                                                          ctgGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGctggctggct                          >  1:891337/1‑138 (MQ=255)

                                                                                                          ctgGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATATTTGACCGCCATGGGCTGCTGTCGCTGCTGGCTGGAc                          >  1:1044672/1‑140 (MQ=255)

                                                                                                           tgGCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACg                         >  2:399571/1‑140 (MQ=255)

                                                                                                             gCTAAGTTATATTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGtt                       >  2:2426747/1‑140 (MQ=255)

                                                                                                                      tatTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCAt              <  2:2030543/140‑1 (MQ=255)

                                                                                                                      tatTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCAt              >  1:1947796/1‑140 (MQ=255)

                                                                                                                       atTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTgctggct                              >  2:53642/1‑123 (MQ=255)

                                                                                                                       atTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTgctggct                              <  1:53642/123‑1 (MQ=255)

                                                                                                                       atTCAGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCAtt             <  1:2426747/140‑1 (MQ=255)

                                                                                                                           aGGGGCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTc         >  1:556738/1‑140 (MQ=255)

                                                                                                                            ggggCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTcc        >  1:1604416/1‑140 (MQ=255)

                                                                                                                             gggCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCg       >  1:1316198/1‑140 (MQ=255)

                                                                                                                             gggCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCg       >  2:386397/1‑140 (MQ=255)

                                                                                                                             gggCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCg       >  1:1535026/1‑140 (MQ=255)

                                                                                                                             gggCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCg       >  1:1597029/1‑140 (MQ=255)

                                                                                                                             gggCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCg       >  2:1887850/1‑140 (MQ=255)

                                                                                                                             gggCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCg       >  2:182948/1‑140 (MQ=255)

                                                                                                                             gggCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTACTGGCTGGACGTTTTCTTGCATTTGTcc        >  2:549009/1‑139 (MQ=255)

                                                                                                                             gggCGCTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTACTGGCTGGACGTTTTCTTGCATTTGTcc        <  1:549009/139‑1 (MQ=255)

                                                                                                                             gggCGCTGGCTAGGGAATACAAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCGGCTTGCGTTGCTGGCTTGACGTTTTCTTGCATTTGTCCg       >  2:689429/1‑140 (MQ=255)

                                                                                                                               gcgcTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTa     <  1:1333651/140‑1 (MQ=255)

                                                                                                                               gcgcTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTa     <  1:1933480/140‑1 (MQ=255)

                                                                                                                                cgcTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCa               >  2:1553824/1‑129 (MQ=255)

                                                                                                                                cgcTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCa               <  1:1553824/129‑1 (MQ=255)

                                                                                                                                cgcTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTAc    >  2:308621/1‑140 (MQ=255)

                                                                                                                                cgcTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTAc    >  2:2279735/1‑140 (MQ=255)

                                                                                                                                  cTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACgc  >  2:2167368/1‑140 (MQ=255)

                                                                                                                                  cTGGCTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACgc  >  2:1566941/1‑140 (MQ=255)

TGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGC  >  NC_000913/3153705‑3153974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`