Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,210,821 T→C V14A (GTA→GCA)  rpsU → 30S ribosomal subunit protein S21

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,210,8210TC100.0% 515.2 / NA 143V14A (GTA→GCA) rpsU30S ribosomal subunit protein S21
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (78/65);  total (78/65)

Only 100 of 147 total aligned reads displayed.

CAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCACGCGAAGAA  >  NC_000913/3210685‑3210956
                                                                                                                                        |                                                                                                                                       
   agcagcagcAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGctct                                                                                                                                   >  1:247006/1‑140 (MQ=255)
   agcagcagcAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGctct                                                                                                                                   >  1:1541596/1‑140 (MQ=255)
     cagcagcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTACTTAAAGTACGTGAAAAGGAGCCGTTCGACGCAGCTCTGc                                                                                                                                 >  2:937339/1‑140 (MQ=255)
     cagcagcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGc                                                                                                                                 >  1:2405955/1‑140 (MQ=255)
     atgtgtcaAATGCACTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTCATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGGCCATGCCGGTAATTAAAGAAAGAGAAAACGAGCCGTTCGACGCAGCTCTGc                                                                                                                                 >  2:2478370/7‑140 (MQ=255)
       gcagcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGt                                                                                                                               <  2:1235652/140‑1 (MQ=255)
        cagcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTc                                                                                                                              >  2:1702474/1‑140 (MQ=255)
        cagcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTc                                                                                                                              >  2:1970981/1‑140 (MQ=255)
        cagcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTc                                                                                                                              >  1:1611928/1‑140 (MQ=255)
          gcaATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGc                                                                                                                            >  2:2432523/1‑140 (MQ=255)
           caATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCt                                                                                                                           <  2:486110/140‑1 (MQ=255)
                  aGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCg                                                                                                                    >  2:2103250/1‑140 (MQ=255)
                  aGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCCACGCAGTTCTGCGTCGCTTCAAGCg                                                                                                                    >  1:1071075/1‑140 (MQ=255)
                      aaaTTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTcc                                                                                                                <  1:1721133/140‑1 (MQ=255)
                      aaaTTCCGCACCATTTTGAAATAAGATGGCGTTGATGGCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTcc                                                                                                                <  1:805332/140‑1 (MQ=255)
                         ttCCGCACCATTTTGAATTAAGCTGGCGTTGCTGCCAGCTGCAAACCGGATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGc                                                                                                             <  2:636277/140‑1 (MQ=255)
                           ccGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGa                                                                                                           <  1:2432523/140‑1 (MQ=255)
                            cGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGaa                                                                                                          >  2:1732192/1‑140 (MQ=255)
                            cGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGaa                                                                                                          >  2:2127375/1‑140 (MQ=255)
                              cACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGaaaa                                                                                                        >  2:1223943/1‑140 (MQ=255)
                              cACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGaaaa                                                                                                        <  2:1541596/140‑1 (MQ=255)
                                ccATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGCACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAg                                                                                                      >  2:2009867/1‑140 (MQ=255)
                                 cATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGc                                                                                                     <  1:1702474/140‑1 (MQ=255)
                                 cATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGc                                                                                                     <  1:1970981/140‑1 (MQ=255)
                                   ttttGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCGGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAg                                                                                                   >  1:1271919/1‑140 (MQ=255)
                                    tttGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAgg                                                                                                  <  2:545470/140‑1 (MQ=255)
                                    tttGAAATAAGCTGGCGGTGATTCCAGCGGCCAACGGAACTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAgg                                                                                                  <  2:764926/140‑1 (MQ=255)
                                       gAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGgtgt                                                                                               <  1:1223943/140‑1 (MQ=255)
                                           tAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTg                                                                                           >  1:1686740/1‑140 (MQ=255)
                                           tAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTg                                                                                           >  1:2338476/1‑140 (MQ=255)
                                             aGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATTCCGGTAATTAAAGTACGTGAAAACGAGTCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGc                                                                                         >  1:1651596/1‑140 (MQ=255)
                                             aGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGc                                                                                         >  1:2408620/1‑140 (MQ=255)
                                               cTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGTTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCgg                                                                                       <  1:446844/140‑1 (MQ=255)
                                                 ggCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGaa                                                                                     <  1:1732192/140‑1 (MQ=255)
                                                  gCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTTTGCGTCGCTTCAAGCGCTCCTGCGACAAAGCAGGTGTTCTGGCGGAAg                                                                                    >  2:1019461/1‑140 (MQ=255)
                                                  gCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTGTGCGTCGCGTCAAGCGGTCCTGCGAGAAAGAAGGTGTTCTGGCGGAAg                                                                                    >  2:664116/1‑140 (MQ=255)
                                                   cGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCGGCGTCGCTGCAATCGTGCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGt                                                                                   >  2:763512/1‑140 (MQ=255)
                                                      tGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTtcg                                                                                <  2:1686740/140‑1 (MQ=255)
                                                        aTGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTtcgtc                                                                              <  2:1731012/140‑1 (MQ=255)
                                                             gggggCAAACCAAATAAACAAAAGGGGGGGGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTcgtcgtcgt                                                                         <  2:1637826/137‑1 (MQ=255)
                                                             aGCGGCAAACCGAATTAATCAATGGCGAGTGGCACATCCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTcgtcgtcgt                                                                         <  1:664116/140‑1 (MQ=255)
                                                             aGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTcgtcgtcgt                                                                         >  2:7002/1‑140 (MQ=255)
                                                             aGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTcgtcgtcgt                                                                         <  2:1491942/140‑1 (MQ=255)
                                                             aGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTcgtcgtcgt                                                                         <  2:1767441/140‑1 (MQ=255)
                                                             aGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTcgtcgtcgt                                                                         <  1:177557/140‑1 (MQ=255)
                                                             aGCGGCAAACCAAATCAATCAAGGGAGAGAGGCACATAGCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTcgtcgtcgt                                                                         <  1:876711/140‑1 (MQ=255)
                                                               cGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTTCGATAAAGCAGGTGTTGTGGCGGAAGTTCGTCGTCGTGa                                                                       >  2:938033/1‑140 (MQ=255)
                                                                  cAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGtt                                                                    <  1:1253663/140‑1 (MQ=255)
                                                                  cAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGtt                                                                    <  2:1611928/140‑1 (MQ=255)
                                                                       cGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATg                                                               >  1:1991511/1‑140 (MQ=255)
                                                                         aaTTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGaa                                                             <  2:2394469/140‑1 (MQ=255)
                                                                              aTCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAcc                                                        <  2:2073833/140‑1 (MQ=255)
                                                                               tCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCg                                                       <  1:2141912/140‑1 (MQ=255)
                                                                               gcAAAGGTAAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCg                                                       <  1:2455279/139‑1 (MQ=255)
                                                                                   aGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTa                                                   <  2:2394460/140‑1 (MQ=255)
                                                                                    ggTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTAc                                                  <  1:2186618/140‑1 (MQ=255)
                                                                                        agagGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGaa                                              >  1:1613762/1‑140 (MQ=255)
                                                                                        agagGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGaa                                              >  2:2002035/1‑140 (MQ=255)
                                                                                        agagGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGaa                                              >  2:2013030/1‑140 (MQ=255)
                                                                                        agagGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGaa                                              >  2:1625201/1‑140 (MQ=255)
                                                                                        agagGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGaa                                              >  2:139756/1‑140 (MQ=255)
                                                                                        agagGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGGTCGTCGTTGTGAGTTCTATGACAAACCGACTACCGaa                                              >  1:1012228/1‑140 (MQ=255)
                                                                                             cacaTGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTa                                                   <  1:2337313/130‑1 (MQ=255)
                                                                                             cacaTGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTa                                                   >  2:2337313/1‑130 (MQ=255)
                                                                                              acaTGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAg                                        <  2:2408620/140‑1 (MQ=255)
                                                                                              acaTGCCGGTAATTAAAGTACGGGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAg                                        <  1:986407/140‑1 (MQ=255)
                                                                                               caTGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgc                                       >  2:2063581/1‑140 (MQ=255)
                                                                                               caTGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgc                                       >  1:2286220/1‑140 (MQ=255)
                                                                                                 tGCCGGTAATTAAAGTACGTGATAACGAGGCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAgcgc                                     <  1:937339/140‑1 (MQ=255)
                                                                                                    cGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCt                                  >  2:110305/1‑140 (MQ=255)
                                                                                                       tAATTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTaaa                               >  1:1485933/1‑140 (MQ=255)
                                                                                                         aTTAAAGTACGTGAAGACGAGCTGTTCGAGGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGc                             <  1:1122133/140‑1 (MQ=255)
                                                                                                         aTTAAAGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGc                             <  1:1317787/140‑1 (MQ=255)
                                                                                                            aaaGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTc                          <  2:247006/140‑1 (MQ=255)
                                                                                                             aaGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCt                         >  2:457246/1‑140 (MQ=255)
                                                                                                              aGTACGTGAAAACGAGCGGTTCAACGCAGCATTGCTTCGTTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTg                        <  2:1170125/140‑1 (MQ=255)
                                                                                                              aGTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTg                        <  2:383423/140‑1 (MQ=255)
                                                                                                               gTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGGGTTCTATGAAAATCCGCCTACCGAAGGTAAGCGCGCTAAAGCTTCTGc                       >  2:1116362/1‑140 (MQ=255)
                                                                                                               gTACGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGc                       <  2:1748017/140‑1 (MQ=255)
                                                                                                                  cGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAGCGACTACGGAATGTAAGCGCGATAAAGCTTCTGCAGt                    >  1:809997/1‑140 (MQ=255)
                                                                                                                  cGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAAGCGACTACGGAAAGTCAGCGCGATAAAGCTTCTGCAGt                    >  1:705626/1‑140 (MQ=255)
                                                                                                                  cGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGt                    >  1:1818195/1‑140 (MQ=255)
                                                                                                                  cGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGt                    >  1:2091594/1‑140 (MQ=255)
                                                                                                                  cGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGt                    >  2:75244/1‑140 (MQ=255)
                                                                                                                  cGTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGATCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAgg                    >  2:2320905/1‑139 (MQ=255)
                                                                                                                   gTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTg                        <  2:2488611/135‑1 (MQ=255)
                                                                                                                   gTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTg                        >  1:2488611/1‑135 (MQ=255)
                                                                                                                   gTGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTg                   >  2:2173675/1‑140 (MQ=255)
                                                                                                                    tGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGa                  >  2:1331576/1‑140 (MQ=255)
                                                                                                                    tGAAAACGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGa                  >  1:1222583/1‑140 (MQ=255)
                                                                                                                         aCGAGCCGTTCGACGCAACTCTGCGTCGCTTTAAGGGTTGCTGCGAAAGAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGt             <  2:809997/140‑1 (MQ=255)
                                                                                                                          cGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTc            >  1:2021265/1‑140 (MQ=255)
                                                                                                                          cGAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACAGAACGTAAGCGCGCAAAAGCTTCTGCAGTGAAACGTc            >  1:1118117/1‑140 (MQ=255)
                                                                                                                           gAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCa           <  2:1283673/140‑1 (MQ=255)
                                                                                                                           gAGCCGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCa           <  1:139756/140‑1 (MQ=255)
                                                                                                                              ccGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCAcgc        <  2:2153163/140‑1 (MQ=255)
                                                                                                                               cGTTCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCAcgcg       <  2:1991511/140‑1 (MQ=255)
                                                                                                                                 ttCGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCACGCgaa     >  1:2012630/1‑140 (MQ=255)
                                                                                                                                   cGACGCAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTCCCGAACGTGAGCGCGCTAAAGCTTCTGCAGCGAAACGTCACGCgaaga   >  2:808982/1‑140 (MQ=255)
                                                                                                                                    gACGCAGCTCTGCGTCGCTTCATGCTTTCTTGCGAAAGAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCACGCgaagaa  <  1:1019461/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                       
CAAAGCAGCAGCAATTGCAGTAAAATTCCGCACCATTTTGAAATAAGCTGGCGTTGATGCCAGCGGCAAACCGAATTAATCAAAGGTGAGAGGCACATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCACGCGAAGAA  >  NC_000913/3210685‑3210956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑