| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,238,460 | A→G | intergenic (+163/‑120) | ygjR → / → alx | putative oxidoreductase YgjR/putative membrane‑bound redox modulator Alx |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,238,460 | 0 | A | G | 99.6% | 810.3 / NA | 230 | intergenic (+163/‑120) | ygjR/alx | putative oxidoreductase YgjR/putative membrane‑bound redox modulator Alx |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (115/114); total (115/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 236 total aligned reads displayed.
GTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCA > NC_000913/3238323‑3238595 | gTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCg > 1:383481/1‑140 (MQ=255) tATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATgcgc < 1:343968/140‑1 (MQ=255) aTGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCa > 2:2116019/1‑140 (MQ=255) aTGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCa > 1:1724242/1‑140 (MQ=255) aTGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCa > 1:1591585/1‑140 (MQ=255) aGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTAt > 2:62428/1‑140 (MQ=255) aGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTAt > 1:1230583/1‑140 (MQ=255) aGACCATTGACTGGCTCAATGGTCTGTCATACTGTCTTACCTGCAAAGCGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTAt < 2:1109791/140‑1 (MQ=255) gACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTAtt > 2:2432396/1‑140 (MQ=255) gACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTAtt > 2:2044316/1‑140 (MQ=255) aCCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTc > 2:1828386/1‑140 (MQ=255) aCCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTc > 1:184404/1‑140 (MQ=255) ttGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCAGCGGGCAATCCGTAAGGAATGCGCAGACGTATTCCttt > 1:891051/1‑140 (MQ=255) tGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCGCCGAGCAGCCCGAAAGAAATGAGCAGACGTATTCCtttt > 2:736022/1‑140 (MQ=255) tGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCtttt < 1:1567165/140‑1 (MQ=255) gACTGGCTGAATGGTCTTTCATGCTTTGTTACCTGTAAATGGGAGTAATTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCttttt < 2:891051/140‑1 (MQ=255) gACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCttttt < 1:1987562/140‑1 (MQ=255) cTGGCTGAATGGTCTGTCATACTTTGTTACCTGCATAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTttg < 2:1003123/140‑1 (MQ=255) ggCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCGACCCGAAAGGAGTGAGCAGACGTATTCCTTTTttgtt > 1:835576/1‑140 (MQ=255) ggCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTttgtt > 1:1450145/1‑140 (MQ=255) ggCTGAATGGTCTGTCATACTTTGTTACCTGAAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTttgtt < 2:957116/140‑1 (MQ=255) gCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAGCCCGAAAGGAAAGCTCAGACGAATTCCTTTTttgttg > 1:686094/1‑140 (MQ=255) gCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTttgttg < 2:1632192/140‑1 (MQ=255) cTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTtgttgt > 1:1624355/1‑140 (MQ=255) gTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTgag > 1:585947/1‑140 (MQ=255) tACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGcc < 1:1348871/140‑1 (MQ=255) cTTTGTTACCTGCAACGGGGAGCAATTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCgg < 1:804427/140‑1 (MQ=255) cTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCgg < 1:1311298/140‑1 (MQ=255) cTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCgg < 2:219078/140‑1 (MQ=255) cTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCgg > 1:2137530/1‑140 (MQ=255) cTTTGTTACCTGCAAAGGGGAGTAACTTCATGGCCAGTCCATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCgg < 2:1050117/140‑1 (MQ=255) tttGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGa > 1:1682999/1‑140 (MQ=255) ttACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGc > 2:351430/1‑140 (MQ=255) ttACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGc > 2:463079/1‑140 (MQ=255) ttACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGc > 1:1927507/1‑140 (MQ=255) ttACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGc < 2:1724242/140‑1 (MQ=255) ttACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGc > 1:2234390/1‑140 (MQ=255) ttACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTCTTGTTGAAAGTGATACCTTGCCGGAAGGc > 1:1122416/1‑140 (MQ=255) ttACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATGCCTGTTTTGTTGAAAGTCAGACCTTGCCGGAAGGc > 2:804427/1‑140 (MQ=255) gCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGc < 1:453998/134‑1 (MQ=255) gCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTc > 1:1660402/1‑140 (MQ=255) aaGGGGAGTAACTTCATTGCCGATCGATCGTTATTCCGACGTGTGAAACAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTAt < 2:858733/140‑1 (MQ=255) aGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCg > 1:1824819/1‑131 (MQ=255) aGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATaa > 1:611887/1‑140 (MQ=255) aGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGAAAGTGAGACCTAGCAGGAAGGCGAGGTCTATGCATaa > 1:1029116/1‑140 (MQ=255) tCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAagcag > 2:1367122/1‑140 (MQ=255) tCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAagcag < 2:1230583/140‑1 (MQ=255) tCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAagcag > 2:1287330/1‑140 (MQ=255) tCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAagcag > 1:1986189/1‑140 (MQ=255) tCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAagcag > 1:226730/1‑140 (MQ=255) cATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAagcagc > 2:2452971/1‑140 (MQ=255) tGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGc < 2:175683/140‑1 (MQ=255) tGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGc > 2:586560/1‑140 (MQ=255) ggTCGATCGTCATTACGTTGTGCGAAAAAACCCATTC‑GGTCACCGGGCCACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGAc < 2:783666/140‑1 (MQ=255) ggTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGAc < 1:2214845/140‑1 (MQ=255) gTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACg > 2:433989/1‑140 (MQ=255) gTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCg > 2:1495808/1‑140 (MQ=255) aTTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACg > 2:1710554/1‑140 (MQ=255) tgtgAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtt < 2:258452/140‑1 (MQ=255) tgtgAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtt > 2:1283894/1‑140 (MQ=255) tgtgAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtt > 1:1796571/1‑140 (MQ=255) tgtgAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtt > 1:630096/1‑140 (MQ=255) tgAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtttt > 1:2470742/1‑140 (MQ=255) gAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGttttt < 2:1450145/140‑1 (MQ=255) aaaaaaCACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtttttt < 1:562395/140‑1 (MQ=255) aaaaaCACATCCGGGTCA‑CGGGGAACCCGAATGCATTGCACAGGCGTATTTCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTAGGCATGAAAAGCAGCGGCTGGCGTCTTCCGACGTTGGCCGttttttt < 2:1122416/140‑1 (MQ=255) aaaaaCACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGTCGTTGGCCGttttttt < 2:1682999/140‑1 (MQ=255) aaaaaCACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGttttttt < 2:383481/140‑1 (MQ=255) aaaCACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAt < 2:1302241/140‑1 (MQ=255) aaaCACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAt < 1:2390076/140‑1 (MQ=255) aaaCACATCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAt < 1:1290479/140‑1 (MQ=255) cacaTCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCTTAAAAAGCTGCGGCTGACGTCTTCCGAAGTTGGCCGTTTTTTTAtgtg > 2:1160088/1‑140 (MQ=255) cacaTCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg > 2:500147/1‑140 (MQ=255) cacaTCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg > 1:1284709/1‑140 (MQ=255) cacaTCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg > 2:567061/1‑140 (MQ=255) caTCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa < 1:1240897/140‑1 (MQ=255) caTCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa > 2:2012550/1‑140 (MQ=255) caTCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa > 1:1404780/1‑140 (MQ=255) caTCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa > 2:1742052/1‑140 (MQ=255) caTCC‑GGTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa < 2:125903/140‑1 (MQ=255) ggTCACCGGGCAACCCGGAAGGCATGCGCAGTCGTTTTCTTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa < 2:657997/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa < 2:1664686/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa < 1:1375974/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa < 2:1404780/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa < 2:1769495/140‑1 (MQ=255) gTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAAc > 1:1267417/1‑140 (MQ=255) gTCACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAAc > 1:1719048/1‑140 (MQ=255) tCACCGGGCAACCCGAAAGGAATGCCCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACt < 1:1064810/140‑1 (MQ=255) cACCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTGTTCCGACTTTGACCCTTTTTTGATGTGTAAGGAACtt > 1:657997/1‑140 (MQ=255) aCCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACGTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTc < 2:1386971/140‑1 (MQ=255) aCCGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTc < 2:1986189/140‑1 (MQ=255) ccGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCt < 2:1820179/140‑1 (MQ=255) ccGGGCAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCt < 2:2234390/140‑1 (MQ=255) cAACCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGaa < 2:226730/140‑1 (MQ=255) aCCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa > 1:1755323/1‑128 (MQ=255) aCCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa > 1:75274/1‑128 (MQ=255) aCCCGAAAGGAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATa > 1:2092413/1‑140 (MQ=255) gAATGCGCAGACGTATTGCTTTTTTGTTGTACGTGTGACTTTGCCGGATGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 2:835576/140‑1 (MQ=255) gAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 1:1742052/140‑1 (MQ=255) gAATGCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 1:2058259/140‑1 (MQ=255) | GTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCC‑GGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCA > NC_000913/3238323‑3238595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |