Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 393,275 T→C pseudogene (306/1449 nt) yaiT → putative autotransporter YaiT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913393,2750TC100.0% 748.1 / NA 210pseudogene (306/1449 nt)yaiTputative autotransporter YaiT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (101/109);  total (101/109)

Only 100 of 211 total aligned reads displayed.

CGATTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGTACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTATCTACGTAAACGACGTCA  >  NC_000913/393140‑393411
                                                                                                                                       |                                                                                                                                        
cGATTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTg                                                                                                                                      >  2:301375/1‑140 (MQ=255)
  aTTACGTTCTGAACGCTGATCTTGTCAACCACCGTACGTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGaa                                                                                                                                    <  1:750556/140‑1 (MQ=255)
  aTTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAATGGCGACGTAGACAACGGCACTGaa                                                                                                                                    <  1:2050491/140‑1 (MQ=255)
  aTTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGaa                                                                                                                                    >  1:453564/1‑140 (MQ=255)
  aTTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGaa                                                                                                                                    >  1:379009/1‑140 (MQ=255)
  aTTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGaa                                                                                                                                    >  1:2399333/1‑140 (MQ=255)
  aTTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGaa                                                                                                                                    <  2:1646589/140‑1 (MQ=255)
  aTTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGaa                                                                                                                                    >  1:1349567/1‑140 (MQ=255)
  aTTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGaa                                                                                                                                    <  2:2295918/140‑1 (MQ=255)
  aTTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGaa                                                                                                                                    <  2:2435897/140‑1 (MQ=255)
  aTTACGTTCTGAACGCTGATCTCGTCAACTACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGaa                                                                                                                                    <  1:928160/140‑1 (MQ=255)
   ttACGTTCTGAACGCTGATCTGTTGCACGTCCGTACCCGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAAc                                                                                                                                   <  1:1042512/140‑1 (MQ=255)
   ttACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAAc                                                                                                                                   <  1:1596865/140‑1 (MQ=255)
     aCGTTCTGAACGCTGATGTGGTAAACGACCGGACCTGGGTTACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTg                                                                                                                                 <  2:782571/140‑1 (MQ=255)
       gTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAAc                                                                                                                                   <  1:1894808/136‑1 (MQ=255)
            gAACGCTGATCTGGTGTACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACa                                                                                                                          <  2:314483/140‑1 (MQ=255)
            gAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACa                                                                                                                          <  1:571043/140‑1 (MQ=255)
            gAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACa                                                                                                                          >  2:1332492/1‑140 (MQ=255)
            gAACGCTGATCTGGTCAACGACCGTACCTTGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACa                                                                                                                          <  1:869952/140‑1 (MQ=255)
             aaCGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACa                                                                                                                          <  2:1881975/139‑1 (MQ=255)
             aaCGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAg                                                                                                                         <  1:301375/140‑1 (MQ=255)
             aaCGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAg                                                                                                                         >  1:1913984/1‑140 (MQ=255)
             aaCGCTGATCTGGTGAACGACCATACCTGGGATACTTCCAAGTCTAACCACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAg                                                                                                                         <  2:703526/140‑1 (MQ=255)
              aCGCTGATCTGGTGAACGACCATACCTGGGATACTTCGAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGc                                                                                                                        <  2:2061785/140‑1 (MQ=255)
               cGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGct                                                                                                                       <  2:453564/140‑1 (MQ=255)
               cGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGct                                                                                                                       <  1:1977045/140‑1 (MQ=255)
               cGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGct                                                                                                                       <  1:1403306/140‑1 (MQ=255)
               cGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGct                                                                                                                       <  1:2315347/140‑1 (MQ=255)
                gCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTg                                                                                                                                 <  1:2267680/129‑1 (MQ=255)
                gCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGctc                                                                                                                      <  1:2328249/140‑1 (MQ=255)
                    aTCTGGTGGACGACCGTGCCTGCGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTa                                                                                                                  <  2:1141132/140‑1 (MQ=255)
                    aTCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAg                                                                                                                         >  2:1411424/1‑133 (MQ=255)
                    aTCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGctct                                                                                                                     <  1:2466359/137‑1 (MQ=255)
                      cTGGTGAACGACCGTGCCTGGGATAATTCTAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGa                                                                                                                <  1:817676/140‑1 (MQ=255)
                          tGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAAt                                                                                                            <  1:2042753/140‑1 (MQ=255)
                            aaCGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGctct                                                                                                                     <  2:1604836/129‑1 (MQ=255)
                                aCCGTACCTGGGATACTCCCAAATCTAACTACGGTAACGGTATTGTTGGTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATgttgtt                                                                                                      <  2:938614/140‑1 (MQ=255)
                                 ccGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGttgttg                                                                                                     >  1:2212820/1‑140 (MQ=255)
                                 ccGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGttgttg                                                                                                     >  2:1963644/1‑140 (MQ=255)
                                   gTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTtgct                                                                                                   >  1:344878/1‑140 (MQ=255)
                                     aCCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTtgctgc                                                                                                 <  2:1913984/140‑1 (MQ=255)
                                     aCCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTtgctgc                                                                                                 <  2:1376635/140‑1 (MQ=255)
                                      ccTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCa                                                                                                >  1:1228228/1‑140 (MQ=255)
                                           gATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGACACTGAACGGGAAAACTGCTCTGTAGACAATGTTGTTGCTGCAACCgg                                                                                           >  2:832549/1‑140 (MQ=255)
                                              aCTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTaa                                                                                        >  2:569098/1‑140 (MQ=255)
                                                ttCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTAAACTGGATCACAGCTCAGTAGACAAAGTTGTTGCTGCAACCGGTAACt                                                                                      >  2:1038915/1‑140 (MQ=255)
                                                 tCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTCTAGACAATGTTGTGGCTGCAACCGGTAACTa                                                                                     >  2:958705/1‑140 (MQ=255)
                                                     aGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACaaa                                                                                 >  1:83825/1‑140 (MQ=255)
                                                         tAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTc                                                                             >  1:2207092/1‑140 (MQ=255)
                                                         tAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTc                                                                             >  1:223903/1‑140 (MQ=255)
                                                            cTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTa                                                                          >  2:1812621/1‑140 (MQ=255)
                                                                 gttacggtATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAAc                                                                                       >  1:479223/1‑122 (MQ=255)
                                                                    acggtATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAg                                                                                >  2:2152390/1‑126 (MQ=255)
                                                                    acggtATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAg                                                                                <  1:2152390/126‑1 (MQ=255)
                                                                     cggtATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAAGCGGGAAATACAAAGTTCGTATCGACAACg                                                                 >  1:899565/1‑140 (MQ=255)
                                                                       gtATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCa                                                               >  2:2180331/1‑140 (MQ=255)
                                                                           tgttgCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGCAACTACAACGTTCCAATCGACAACGCAActg                                                           >  2:1111443/1‑140 (MQ=255)
                                                                            gttgCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAActgg                                                          >  2:336644/1‑140 (MQ=255)
                                                                            gttgCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAActgg                                                          >  2:839973/1‑140 (MQ=255)
                                                                              tgCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAActggcg                                                        <  1:2180331/140‑1 (MQ=255)
                                                                               gCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAActggcgc                                                       >  1:267482/1‑140 (MQ=255)
                                                                               gCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGCTGCTGCAAGCGGTAACTACAAAGTTGGTATGGACAACGCAActggcgc                                                       >  2:856035/1‑140 (MQ=255)
                                                                                cTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAActggcgct                                                      >  1:1663823/1‑140 (MQ=255)
                                                                                cTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAActggcgct                                                      <  2:1228228/140‑1 (MQ=255)
                                                                                  aTGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAActggcgctgg                                                    >  1:1995281/1‑140 (MQ=255)
                                                                                  aTGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGCATCGACAACGCAActggcgctgg                                                    >  2:2287809/1‑140 (MQ=255)
                                                                                   tGAACTCTGATGGTCACCTGACCATTAACCGTAACGGTGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGATAACTACAAAGTTCGTATCGACAACGCAActggcgctggc                                                   <  1:1020739/140‑1 (MQ=255)
                                                                                     aaCTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACtggcgctggcgc                                                 >  1:10794/1‑140 (MQ=255)
                                                                                          tGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCg                                            <  2:200973/140‑1 (MQ=255)
                                                                                          tGATGGTAACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCg                                            >  2:1312375/1‑140 (MQ=255)
                                                                                           gATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGc                                           <  2:2399333/140‑1 (MQ=255)
                                                                                               gTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCATATCGACAACGCAACTGGCGCTGGCGCTATCGCTGAt                                       >  1:846252/1‑140 (MQ=255)
                                                                                               gTCACCTAACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGAt                                       <  2:426181/140‑1 (MQ=255)
                                                                                                  aCCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTAc                                    >  1:1517266/1‑140 (MQ=255)
                                                                                                  aCCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTAc                                    >  1:361467/1‑140 (MQ=255)
                                                                                                  aCCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTAc                                    >  2:2303613/1‑140 (MQ=255)
                                                                                                  aCCTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTACCGACAACGCAAGTGGCGCTGGGGCTATCGCTGATTAc                                    >  1:1185639/1‑140 (MQ=255)
                                                                                                   ccTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGTTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACa                                   <  2:46976/140‑1 (MQ=255)
                                                                                                   ccTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACa                                   <  1:1240027/140‑1 (MQ=255)
                                                                                                   ccTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACa                                   <  1:1379388/140‑1 (MQ=255)
                                                                                                   ccTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACa                                   <  2:260519/140‑1 (MQ=255)
                                                                                                    cTGACTATCAACGGTAAGGGCGACGTAGACAACAGCACTGAACTGGATTACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACaa                                  <  2:1152151/140‑1 (MQ=255)
                                                                                                    cTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACaa                                  <  1:990139/140‑1 (MQ=255)
                                                                                                    cTGACTATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACaa                                  <  2:361467/140‑1 (MQ=255)
                                                                                                         tATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATa                             <  2:28896/140‑1 (MQ=255)
                                                                                                         tATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATa                             <  2:2243501/140‑1 (MQ=255)
                                                                                                         tATCAACGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATa                             <  1:2247306/140‑1 (MQ=255)
                                                                                                              aCGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGa                               >  2:2205484/1‑133 (MQ=255)
                                                                                                              aCGGTAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGaa                        >  2:86914/1‑140 (MQ=255)
                                                                                                                  tAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACa                                   <  2:225951/125‑1 (MQ=255)
                                                                                                                  tAACGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTa                    >  2:1507747/1‑140 (MQ=255)
                                                                                                                   aaCGGCGACGTAGACAAGGGCACTGAACTGGGTAAGAGCCCTGTAGACTATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTAt                   <  2:808999/140‑1 (MQ=255)
                                                                                                                   aaCGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTAt                   >  1:920302/1‑140 (MQ=255)
                                                                                                                   aaCGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTAt                   <  1:185087/140‑1 (MQ=255)
                                                                                                                    aCGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTATc                  <  1:1916377/140‑1 (MQ=255)
                                                                                                                     cGGCGACGTAGACAACGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTATCt                 >  2:2231074/1‑140 (MQ=255)
                                                                                                                              aGACAACGGCACTGACCTGGATAACAGCTTTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTATCTACGTAAacg        <  1:958705/140‑1 (MQ=255)
                                                                                                                                    cGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTATCTACGTAAACGACGTCa  <  1:1312375/140‑1 (MQ=255)
                                                                                                                                    cGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTATCTACGTAAACGACGTCa  >  1:326910/1‑140 (MQ=255)
                                                                                                                                    cGGCACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTATCTACGTAAACGACGTCa  >  2:1551237/1‑140 (MQ=255)
                                                                                                                                       |                                                                                                                                        
CGATTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGTACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTATCTACGTAAACGACGTCA  >  NC_000913/393140‑393411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑