BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,424,645	A→G	noncoding (2139/2904 nt)	rrlD ←	23S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,424,645	0	A	G	99.3%	340.7 / ‑4.7	151	noncoding (2139/2904 nt)	rrlD	23S ribosomal RNA
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (67/83); total (67/84)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.71e-01

Only 100 of 154 total aligned reads displayed.

TCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCT  >  NC_000913/3424514‑3424781

tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTa                                                                                                                                  <  1:456912/140‑1 (MQ=14)

 ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCCAGGTCGGATCCCTGCAGACTGTCGTCCGCACTTCTaa                                                                                                                                 >  1:791623/1‑140 (MQ=11)

 ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTaa                                                                                                                                 >  1:1774908/1‑140 (MQ=17)

  tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAg                                                                                                                                >  1:2058110/1‑140 (MQ=17)

   ttAGGAGGAGACCGCCCCAGTCTAACTACCCCCCACACAATGTCCGCATCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGc                                                                                                                               <  2:691069/140‑1 (MQ=11)

    tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAGGGTGGGCACCATGCAGACTGCAGTCCGCACTTCTAAGcc                                                                                                                              >  2:834306/1‑140 (MQ=11)

    tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGcc                                                                                                                              >  2:274785/1‑140 (MQ=17)

     aggaggAGACCGCCCCAGTCAATCTACCCTCCAGACAATGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCt                                                                                                                             <  1:751004/140‑1 (MQ=255)

     aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCt                                                                                                                             <  2:73827/140‑1 (MQ=18)

       gaggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTcc                                                                                                                           <  2:2245224/140‑1 (MQ=17)

         ggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGATCCATGCCGACAGGCGTCCGCGCTTCTAAGCCTCCCa                                                                                                                         >  1:1159346/1‑140 (MQ=11)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        >  2:1270133/1‑140 (MQ=17)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        <  1:402156/140‑1 (MQ=18)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        <  1:1072104/140‑1 (MQ=18)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        <  1:363641/140‑1 (MQ=18)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        <  2:138412/140‑1 (MQ=18)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        >  2:1521137/1‑140 (MQ=17)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        <  1:2323529/140‑1 (MQ=17)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        <  2:2454599/140‑1 (MQ=18)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        <  2:469077/140‑1 (MQ=18)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        <  1:1424778/140‑1 (MQ=17)

          gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc                                                                                                                        <  2:2030098/140‑1 (MQ=33)

          gagaCCGCACCAGTCAGCCTACCCACCAGACTCTGTCCGAAACCCGGACTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCAc                                                                                                                        <  2:1206100/140‑1 (MQ=11)

            gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCt                                                                                                                      <  2:24871/140‑1 (MQ=18)

            gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCt                                                                                                                      >  1:62100/1‑140 (MQ=17)

            gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCAGCACTTCTAAGCCTCCCACCt                                                                                                                      >  1:1959379/1‑140 (MQ=17)

                gCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATcc                                                                                                                  <  1:1521137/140‑1 (MQ=17)

                 ccccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTa                                                                                                                                  >  1:607936/1‑123 (MQ=14)

                 ccccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCt                                                                                                                             <  2:403422/128‑1 (MQ=18)

                           acagcccACCAGACACTTTCCGTAACCCGGACTACGGGTCAACGTTAGCACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAg                                                                                                       <  2:684519/136‑1 (MQ=11)

                            cTACCCACCAGACACTGTCCGCCACCCGGATTACGGGTCAACGTTAGAGCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAgg                                                                                                      <  2:1047999/140‑1 (MQ=12)

                                ccaccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCa                                                                                                  <  1:1695357/140‑1 (MQ=18)

                                ccaccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCa                                                                                                  <  1:1270133/140‑1 (MQ=18)

                                ccaccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCa                                                                                                  >  2:1695357/1‑140 (MQ=17)

                                     aGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt                                                                                             <  2:1392489/140‑1 (MQ=17)

                                     aGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt                                                                                             <  2:578903/140‑1 (MQ=17)

                                      gACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc                                                                                            <  2:62100/140‑1 (MQ=17)

                                      gACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc                                                                                            <  2:1798673/140‑1 (MQ=18)

                                          cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCACCCACCTATCCTACACATCAAGGCTCAATGTTcctgt                                                                                        >  1:684519/1‑136 (MQ=12)

                                           tGTCCGCAACCCGGATTCCGGGACAACGTTACAACCTCACACATTAAATGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt                                                                                       <  2:697003/140‑1 (MQ=11)

                                           tGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt                                                                                       <  1:398924/140‑1 (MQ=18)

                                            gTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTc                                                                                      <  2:380689/140‑1 (MQ=18)

                                             tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTGCTAAGCCTTCCAGCTACCCTACACATCAAGCCTCAATGTTCAGTGTCa                                                                                     >  2:947262/1‑140 (MQ=11)

                                              ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCCCCTATCCCACAGATTAAGGCTCAATGTTCAGTGTCaa                                                                                    >  1:1195205/1‑140 (MQ=11)

                                              ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCa                                                                                     <  1:1883734/139‑1 (MQ=18)

                                              ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCa                                                                                     >  2:1883734/1‑139 (MQ=17)

                                               cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAg                                                                                   <  1:2168771/140‑1 (MQ=18)

                                                gCAACCCGGATTACGGGTCAACTTTAGAACAGCAATCATAAAAGGGTGATATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc                                                                                  <  2:773304/140‑1 (MQ=11)

                                                gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACGTTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc                                                                                  <  1:834306/140‑1 (MQ=17)

                                                gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc                                                                                  <  2:1963664/140‑1 (MQ=18)

                                                gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc                                                                                  <  1:446187/140‑1 (MQ=18)

                                                gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCAGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc                                                                                  <  2:1959379/140‑1 (MQ=16)

                                                  aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc                                                                                  <  1:80822/138‑1 (MQ=18)

                                                                 tCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACg                                                                 <  1:1243113/140‑1 (MQ=17)

                                                                 tCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACg                                                                 <  1:1838172/140‑1 (MQ=17)

                                                                   aaCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACggg                                                               <  2:76679/140‑1 (MQ=17)

                                                                          gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTc                                                        >  2:2382999/1‑140 (MQ=17)

                                                                               tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCt                                                   >  1:2128821/1‑140 (MQ=17)

                                                                               tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTCTCAAGCTATAGCAAAGGTTCACGGGGTCTTTCCGTCt                                                   >  1:825962/1‑140 (MQ=12)

                                                                                cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCtt                                                  <  2:85406/140‑1 (MQ=17)

                                                                                cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCtt                                                  >  1:1898254/1‑140 (MQ=17)

                                                                                cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGCCAAGCTATAGTAAAAGTTCACAGGGTCTTTCCGTCtt                                                  >  1:983566/1‑140 (MQ=255)

                                                                                  aaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTc                                                    <  1:2446289/136‑1 (MQ=17)

                                                                                  aaCATTAAAGGGTGGGATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAACGTTCAGTGCCAAGCAACAGTAAAGGATCACTGGGTCTTTCCGTCTTGc                                                >  2:1200702/1‑140 (MQ=11)

                                                                                    cATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCcg                                              >  1:1608049/1‑140 (MQ=17)

                                                                                      ttAAAGGGTGGTATTTCAAGGTCGGCTCCTTGCAGACCGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCcgcg                                            <  1:721423/140‑1 (MQ=12)

                                                                                        caggggTGGTATTTCGAGGTCGGCTTCATTCAGACTGTCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCggg                                          <  1:922635/137‑1 (MQ=11)

                                                                                        aaaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCggg                                          >  2:472592/1‑140 (MQ=17)

                                                                                         aaGGGTGG‑ATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTa                                        <  1:2328656/140‑1 (MQ=12)

                                                                                             gtggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTacac                                     <  1:212328/140‑1 (MQ=17)

                                                                                             gtggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTacac                                     <  1:2058789/140‑1 (MQ=17)

                                                                                              tggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACt                                    >  1:1716344/1‑140 (MQ=17)

                                                                                               ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGTGGTCTTGCCGTCTGGCCGCGGGTACACTg                                   >  1:903663/1‑140 (MQ=255)

                                                                                               ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCggg                                          <  2:2253023/133‑1 (MQ=17)

                                                                                               ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCggg                                          >  1:2253023/1‑133 (MQ=17)

                                                                                               ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTac                                       >  2:621145/1‑136 (MQ=17)

                                                                                               ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTac                                       <  1:295847/136‑1 (MQ=17)

                                                                                               ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTac                                       >  2:295847/1‑136 (MQ=17)

                                                                                               ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTg                                   >  1:1824420/1‑140 (MQ=17)

                                                                                               ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTg                                   >  2:1244883/1‑140 (MQ=17)

                                                                                               ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTg                                   >  1:1987737/1‑140 (MQ=17)

                                                                                               ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTg                                   >  2:1498336/1‑140 (MQ=17)

                                                                                               ggtATTTCAAGGTCGACTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTAAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTg                                   <  1:2187177/140‑1 (MQ=12)

                                                                                                gtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGTTATAGTAATGGTACACGGGGTCTTTGCGTCCTGCCGCGGGTACACTGc                                  >  2:721423/1‑140 (MQ=11)

                                                                                                 tATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCa                                 <  2:2058110/140‑1 (MQ=17)

                                                                                                      cAAGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGAAAAGGTTCACGGGGTCGTTCCGTCTTGCCGGGGGTACACTGCATcctg                            >  2:922635/1‑137 (MQ=11)

                                                                                                       aaGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTca                           >  2:2285549/1‑140 (MQ=17)

                                                                                                       aaGGTCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTca                           >  2:2284091/1‑140 (MQ=18)

                                                                                                           tCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTcacatc                       <  1:2382999/140‑3 (MQ=17)

                                                                                                           tCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGc                       <  1:89242/140‑1 (MQ=17)

                                                                                                           tCGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGc                       <  2:208415/140‑1 (MQ=17)

                                                                                                            cGGCTCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCg                      <  2:2128821/140‑1 (MQ=17)

                                                                                                                tCCATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGtc                  <  2:1898254/140‑2 (MQ=17)

                                                                                                                  cATGCAGACTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCa                <  1:629015/140‑1 (MQ=17)

                                                                                                                          cTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACt        <  1:1288388/140‑1 (MQ=17)

                                                                                                                          cTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACt        <  1:472592/140‑1 (MQ=17)

                                                                                                                          cTGGCGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACt        <  2:1716344/140‑1 (MQ=17)

                                                                                                                              cGTCCGCACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGt    >  2:564536/1‑140 (MQ=18)

                                                                                                                                tCCGCACTTCTAAGCCTCCCACCTAGCCTTCACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGtct  <  1:1001177/140‑1 (MQ=12)

                                                                                                                                tCCGCACTTCTAAGCCTCCCACATATCCTACGCATGAAGCCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGtct  <  2:903663/140‑1 (MQ=11)

TCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCT  >  NC_000913/3424514‑3424781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`