BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	394,868	G→A	W121* (TGG→TGA)	iprA →	putative DNA‑binding transcriptional regulator IprA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	394,868	0	G	A	100.0%	752.0 / NA	218	W121* (TGG→TGA)	iprA	putative DNA‑binding transcriptional regulator IprA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (107/111); total (107/111)

Only 100 of 218 total aligned reads displayed.

TAATGAAAAACGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGGCAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGAATTATATC  >  NC_000913/394735‑395003

tAATGAAAAACGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAGCTCTGGCTAGACGCTTTTTACAGGTTAGCCTGACAAAAt                                                                                                                                   >  2:886111/1‑140 (MQ=255)

tAATGAAAAACGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAAt                                                                                                                                   >  1:1808155/1‑140 (MQ=255)

  aTGAAAAACGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAg                                                                                                                                 <  1:313381/140‑1 (MQ=255)

       aaaCGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTc                                                                                                                            >  2:2323809/1‑140 (MQ=255)

         aCGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTg                                                                                                                          <  2:73381/140‑1 (MQ=255)

                    tACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCGTGATAAAATAGAATTCTGGAATTACGCGa                                                                                                               >  1:999086/1‑140 (MQ=255)

                    tACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGa                                                                                                               >  2:306535/1‑140 (MQ=255)

                    tACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGa                                                                                                               >  1:1973201/1‑140 (MQ=255)

                     aCAAATTAATATCAGAAGGAAATTGTACGGGGTATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGAc                                                                                                              >  1:198034/1‑140 (MQ=255)

                     aCAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGAc                                                                                                              >  1:1970364/1‑140 (MQ=255)

                       aaaTTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGt                                                                                                            <  2:1861175/140‑1 (MQ=255)

                            aaTATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGc                                                                                                       >  2:1384995/1‑140 (MQ=255)

                            aaTATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGc                                                                                                       <  2:198034/140‑1 (MQ=255)

                              tatCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTg                                                                                                           >  2:443957/1‑134 (MQ=255)

                              tatCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTc                                                                                                     >  1:498245/1‑140 (MQ=255)

                               atCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCa                                                                                                    <  1:592446/140‑1 (MQ=255)

                               atCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCa                                                                                                    <  1:556044/140‑1 (MQ=255)

                                 cAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCAtt                                                                                                  <  1:1268956/140‑1 (MQ=255)

                                 cAGAAGGAAATTGTACGGGATAACATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCAtt                                                                                                  <  2:1049558/140‑1 (MQ=255)

                                  aGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTg                                                                                                 <  2:43306/140‑1 (MQ=255)

                                              tACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGc                                                                                              >  2:1678862/1‑131 (MQ=255)

                                              tACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCt                                                                                     <  2:2027410/140‑1 (MQ=255)

                                              tACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCt                                                                                     <  2:1494394/140‑1 (MQ=255)

                                              tACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCCGACAAAATAGAATTCTTGAATTACACGAAGTCCAGCTCATTGGGCATAATTCCt                                                                                     >  1:797162/1‑140 (MQ=255)

                                                cGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCa                                                                                             >  2:2183498/1‑130 (MQ=255)

                                                cGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCa                                                                                             <  1:2183498/130‑1 (MQ=255)

                                                cGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTAc                                                                                   >  2:1904835/1‑140 (MQ=255)

                                                        catcTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCATCTCGTTAGGCATAATTCCTACGAACAAAt                                                                           >  1:739142/1‑140 (MQ=255)

                                                        catcTACCAGCCAAACAAACCAGTACGCTTAGTGATCAATATCAACTCGGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAAt                                                                           <  2:1014676/140‑1 (MQ=255)

                                                           cTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcg                                                                        <  2:604923/140‑1 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACTTGCAGCTGATTGGGCATAATTTCTACGAACAAATCcgcg                                                                      >  2:850409/1‑140 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcgcg                                                                      <  1:2323809/140‑1 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcgcg                                                                      >  2:1445280/1‑140 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcgcg                                                                      <  2:2331454/140‑1 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcgcg                                                                      <  1:1904835/140‑1 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcgcg                                                                      >  1:1932400/1‑140 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcgcg                                                                      >  1:1238751/1‑140 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcgcg                                                                      >  2:311418/1‑140 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcgcg                                                                      <  1:306535/140‑1 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcg                                                                        <  2:39139/138‑1 (MQ=255)

                                                             aCCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTACAGCTCAATGGTCACAATTCCTACGAACAAATCcgcg                                                                      >  1:1086152/1‑140 (MQ=255)

                                                              ccAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGGATGATTCCACCGAACAAATCCgcgc                                                                     >  1:1216874/1‑140 (MQ=255)

                                                              ccAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCgcgc                                                                     >  2:1272691/1‑140 (MQ=255)

                                                                 gCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcg                                                                        <  2:1560505/134‑1 (MQ=255)

                                                                 gCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcg                                                                        >  1:1560505/1‑134 (MQ=255)

                                                                 gCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAAc                                                                  >  2:2453186/1‑140 (MQ=255)

                                                                 gCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAAc                                                                  <  2:2402276/140‑1 (MQ=255)

                                                                 gCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAAc                                                                  >  1:1486602/1‑140 (MQ=255)

                                                                 accAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCGGCTCATTGGGCATAATGCCTAGGAACAAATCCGCGCAAc                                                                  >  2:944334/2‑140 (MQ=255)

                                                                  ccAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGAATAATTCCTACGATCAAATCCGCGCAACa                                                                 >  1:834526/1‑140 (MQ=255)

                                                                   caaacaaaCCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcgcg                                                                      <  2:2478315/134‑1 (MQ=255)

                                                                   caaacaaaCCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCcgcg                                                                      >  1:2478315/1‑134 (MQ=255)

                                                                     aacaaacCATTACGCTTTTTGAACAAAATCATCTCCGGCAAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACatta                                                              <  2:834526/140‑1 (MQ=255)

                                                                     aacaaacCATTACGCTTATTGAACACAATAAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACatta                                                              <  1:889371/140‑1 (MQ=255)

                                                                     aacaaacCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACatta                                                              <  2:278490/140‑1 (MQ=255)

                                                                     aacaaacCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACatta                                                              <  1:2081084/140‑1 (MQ=255)

                                                                     aacaaacCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACatta                                                              <  1:1384995/140‑1 (MQ=255)

                                                                      acaaacCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACatta                                                              <  2:187425/139‑1 (MQ=255)

                                                                          acCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATc                                                         >  2:1733485/1‑140 (MQ=255)

                                                                              ttACGCTTATTGAACAAAATCACCTCTGGCGCGACCCTTCTTACTGGTCAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATg                                                     <  2:637958/140‑1 (MQ=255)

                                                                                aCGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAGTCCGCGCAATATTATTATCAATGAt                                                   >  1:1033491/1‑140 (MQ=255)

                                                                                 cGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGAtt                                                  <  2:1932947/140‑1 (MQ=255)

                                                                                    ttATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGAc                                               <  1:1828302/140‑1 (MQ=255)

                                                                                        tGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGa                                           <  1:2179897/140‑1 (MQ=255)

                                                                                        tGAACAAAATCAACTCTGGCGAGACGCTTTTAACTGGTTGGCCTGACAGAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGa                                           <  2:979638/140‑1 (MQ=255)

                                                                                           aCAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATg                                        <  1:2453186/140‑1 (MQ=255)

                                                                                           aCAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATg                                        <  1:121003/140‑1 (MQ=255)

                                                                                           aCAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATg                                        <  1:1445280/140‑1 (MQ=255)

                                                                                            cAAAATCATCTCTGGCTGGACGTTTTTTACCGGTTTGCCTGACAAAATCGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATga                                       <  2:1200558/140‑1 (MQ=255)

                                                                                            cAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATga                                       >  1:1696305/1‑140 (MQ=255)

                                                                                                aTCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATgaagaa                                   >  1:1330636/1‑140 (MQ=255)

                                                                                                   aaCTCTGGCGAGACGCTTTTTACTGTTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTg                                <  1:963389/140‑1 (MQ=255)

                                                                                                    aCTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGc                               <  1:1621541/140‑1 (MQ=255)

                                                                                                    aCTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGc                               >  2:2262752/1‑140 (MQ=255)

                                                                                                    aCTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGc                               <  1:2262752/140‑1 (MQ=255)

                                                                                                    aCTCTGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGc                               >  1:2362402/1‑140 (MQ=255)

                                                                                                      tctGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGa                             <  2:135888/140‑1 (MQ=255)

                                                                                                      tctGGCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGa                             <  1:432736/140‑1 (MQ=255)

                                                                                                          gCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCAc                         >  2:2140940/1‑140 (MQ=255)

                                                                                                          gCGAGACGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCAc                         >  2:323144/1‑140 (MQ=255)

                                                                                                             agaCGCTTTTTACTGGTTAGCCAGACAAAATTGCAGTCTGGAATTACGGGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTa                      <  2:1080624/140‑1 (MQ=255)

                                                                                                               aCGCTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTAtt                    >  2:2386835/1‑140 (MQ=255)

                                                                                                                  cTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGgt                 <  2:1696305/140‑1 (MQ=255)

                                                                                                                  cTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGgt                 <  2:498245/140‑1 (MQ=255)

                                                                                                                  cTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGgt                 <  1:103095/140‑1 (MQ=255)

                                                                                                                  cTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGgt                 <  2:1817985/140‑1 (MQ=255)

                                                                                                                  cTTTTTACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAAAGATTGACAGGAGTGAAGAATTCCGATCACGTATTGgt                 >  1:661322/1‑140 (MQ=255)

                                                                                                                     tttACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGtgtg              <  1:363956/140‑1 (MQ=255)

                                                                                                                     tttACTGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGtgtg              <  2:1235857/140‑1 (MQ=255)

                                                                                                                       tACTGGTTAGCCTGACACAATAAAATTCTGGCATTTCGCAACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGtgat            <  2:776801/140‑1 (MQ=255)

                                                                                                                       tACTGGTTAGCCTGAAAAAATATAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGtgat            <  1:935523/140‑1 (MQ=255)

                                                                                                                          tGGTTAGCCTGACAAAATAGAATTCTGGATTTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGaa         <  1:1070096/140‑1 (MQ=255)

                                                                                                                          tGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTGTTGGTGTGATGaa         <  2:1425687/140‑1 (MQ=255)

                                                                                                                          tGGTTAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGaa         <  2:1973201/140‑1 (MQ=255)

                                                                                                                          tGGTTAGCCTGACAAAAAAGAATTCTGGAATAACGAGACTTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGaa         <  2:891564/140‑1 (MQ=255)

                                                                                                                             ttAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGtgtg              <  1:264277/132‑1 (MQ=255)

                                                                                                                             ttAGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGAATta      >  2:2083566/1‑140 (MQ=255)

                                                                                                                               aGCCTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGAATtata    >  2:93077/1‑140 (MQ=255)

                                                                                                                                 ccTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGAATTATATc  >  2:555213/1‑140 (MQ=255)

                                                                                                                                 ccTGACAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGAATTATATc  >  2:1665285/1‑140 (MQ=255)

TAATGAAAAACGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGGCAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGAATTATATC  >  NC_000913/394735‑395003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`